RNA–Protein interactions for RNA: ENST00000509227.1

PAPD4-212, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-212ENST00000509227 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
PAPD4-212ENST00000509227 PCDHGA10Q9Y5H3 936 aa11.76□□□□□ -0.53
PAPD4-212ENST00000509227 KIAA1468Q9P260 1216 aa11.75□□□□□ -0.53
PAPD4-212ENST00000509227 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
PAPD4-212ENST00000509227 TSR3Q9UJK0 312 aaKnown RBP11.73□□□□□ -0.53
PAPD4-212ENST00000509227 PDE4AP27815 886 aa11.72□□□□□ -0.53
PAPD4-212ENST00000509227 ZNF787Q6DD87 383 aa11.72□□□□□ -0.53
PAPD4-212ENST00000509227 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
PAPD4-212ENST00000509227 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.53
PAPD4-212ENST00000509227 PRKD2Q9BZL6 878 aa11.71□□□□□ -0.53
PAPD4-212ENST00000509227 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
PAPD4-212ENST00000509227 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.69□□□□□ -0.54
PAPD4-212ENST00000509227 FAM98CQ17RN3 349 aaKnown RBP11.68□□□□□ -0.54
PAPD4-212ENST00000509227 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
PAPD4-212ENST00000509227 SEPT9Q9UHD8 586 aaPredicted RBP11.68□□□□□ -0.54
PAPD4-212ENST00000509227 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
PAPD4-212ENST00000509227 LRCH3Q96II8 777 aa11.67□□□□□ -0.54
PAPD4-212ENST00000509227 RYDENQ9NUL5 291 aaKnown RBP11.67□□□□□ -0.54
PAPD4-212ENST00000509227 V9GY48 417 aaPredicted RBP11.67□□□□□ -0.54
PAPD4-212ENST00000509227 PHF14O94880 888 aa11.66□□□□□ -0.54
PAPD4-212ENST00000509227 ZNF775Q96BV0 537 aaPredicted RBP11.66□□□□□ -0.54
PAPD4-212ENST00000509227 DNAJC5Q9H3Z4 198 aa11.63□□□□□ -0.55
PAPD4-212ENST00000509227 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
PAPD4-212ENST00000509227 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
PAPD4-212ENST00000509227 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
PAPD4-212ENST00000509227 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
PAPD4-212ENST00000509227 C6orf132Q5T0Z8 1188 aa11.6□□□□□ -0.55
PAPD4-212ENST00000509227 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
PAPD4-212ENST00000509227 PPP1R18Q6NYC8 613 aa11.59□□□□□ -0.55
PAPD4-212ENST00000509227 LARP6Q9BRS8 491 aaKnown RBP11.59□□□□□ -0.55
PAPD4-212ENST00000509227 PPP4CP60510 307 aa11.57□□□□□ -0.56
PAPD4-212ENST00000509227 MFSD10Q14728 455 aa11.57□□□□□ -0.56
PAPD4-212ENST00000509227 PDZRN3Q9UPQ7 1066 aa11.57□□□□□ -0.56
PAPD4-212ENST00000509227 CHGAP10645 457 aaKnown RBP11.56□□□□□ -0.56
PAPD4-212ENST00000509227 EPAS1Q99814 870 aa11.56□□□□□ -0.56
PAPD4-212ENST00000509227 IL21Q9HBE4 155 aa11.54□□□□□ -0.56
PAPD4-212ENST00000509227 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.53□□□□□ -0.56
PAPD4-212ENST00000509227 MTRQ99707 1265 aa11.52□□□□□ -0.57
PAPD4-212ENST00000509227 PACS2Q86VP3 889 aa11.48□□□□□ -0.57
PAPD4-212ENST00000509227 TSKSQ9UJT2 592 aa11.45□□□□□ -0.58
PAPD4-212ENST00000509227 ZNF516Q92618 1163 aa11.44□□□□□ -0.58
PAPD4-212ENST00000509227 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
PAPD4-212ENST00000509227 SAMD7Q7Z3H4 446 aa11.43□□□□□ -0.58
PAPD4-212ENST00000509227 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
PAPD4-212ENST00000509227 RBM33Q96EV2 1170 aaKnown RBP11.42□□□□□ -0.58
PAPD4-212ENST00000509227 GGCXP38435 758 aa11.4□□□□□ -0.58
PAPD4-212ENST00000509227 TMUB1Q9BVT8 246 aa11.38□□□□□ -0.59
PAPD4-212ENST00000509227 TRIM67Q6ZTA4 783 aa11.37□□□□□ -0.59
PAPD4-212ENST00000509227 MYT1Q01538 1121 aa11.36□□□□□ -0.59
PAPD4-212ENST00000509227 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
PAPD4-212ENST00000509227 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
PAPD4-212ENST00000509227 DGAT1O75907 488 aa11.35□□□□□ -0.59
PAPD4-212ENST00000509227 PKDCCQ504Y2 493 aa11.35□□□□□ -0.59
PAPD4-212ENST00000509227 SMAPO00193 183 aa11.34□□□□□ -0.59
PAPD4-212ENST00000509227 EN1Q05925 392 aaPredicted RBP11.34□□□□□ -0.59
PAPD4-212ENST00000509227 CAMK2BQ13554 666 aa11.34□□□□□ -0.59
PAPD4-212ENST00000509227 POTECB2RU33 542 aa11.33□□□□□ -0.6
PAPD4-212ENST00000509227 APLP1P51693 650 aa11.33□□□□□ -0.6
PAPD4-212ENST00000509227 LCE2AQ5TA79 106 aaPredicted RBP11.33□□□□□ -0.6
PAPD4-212ENST00000509227 TREML4Q6UXN2 200 aa11.33□□□□□ -0.6
PAPD4-212ENST00000509227 DPYSL4O14531 572 aa11.32□□□□□ -0.6
PAPD4-212ENST00000509227 TSR1Q2NL82 804 aaKnown RBP11.32□□□□□ -0.6
PAPD4-212ENST00000509227 DDX12PQ92771 950 aa11.32□□□□□ -0.6
PAPD4-212ENST00000509227 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
PAPD4-212ENST00000509227 MAP3K7O43318 606 aa11.3□□□□□ -0.6
PAPD4-212ENST00000509227 PRSS12P56730 875 aa11.3□□□□□ -0.6
PAPD4-212ENST00000509227 TATDN2Q93075 761 aa11.29□□□□□ -0.6
PAPD4-212ENST00000509227 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
PAPD4-212ENST00000509227 PRR20EP86478 221 aa11.28□□□□□ -0.6
PAPD4-212ENST00000509227 PRR20CP86479 221 aa11.28□□□□□ -0.6
PAPD4-212ENST00000509227 PRR20DP86480 221 aa11.28□□□□□ -0.6
PAPD4-212ENST00000509227 PRR20BP86481 221 aa11.28□□□□□ -0.6
PAPD4-212ENST00000509227 PRR20AP86496 221 aa11.28□□□□□ -0.6
PAPD4-212ENST00000509227 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
PAPD4-212ENST00000509227 NBPF26B4DH59 902 aa11.27□□□□□ -0.61
PAPD4-212ENST00000509227 SLC19A1P41440 591 aa11.27□□□□□ -0.61
PAPD4-212ENST00000509227 HDGFP51858 240 aaKnown RBP11.27□□□□□ -0.61
PAPD4-212ENST00000509227 NBR1Q14596 966 aa11.27□□□□□ -0.61
PAPD4-212ENST00000509227 C3orf80F5H4A9 247 aa11.26□□□□□ -0.61
PAPD4-212ENST00000509227 CERKQ8TCT0 537 aa11.26□□□□□ -0.61
PAPD4-212ENST00000509227 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
PAPD4-212ENST00000509227 RNF40O75150 1001 aa11.25□□□□□ -0.61
PAPD4-212ENST00000509227 COPS2P61201 443 aa11.24□□□□□ -0.61
PAPD4-212ENST00000509227 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
PAPD4-212ENST00000509227 ZPR1O75312 459 aa11.23□□□□□ -0.61
PAPD4-212ENST00000509227 SPRYD7Q5W111 196 aa11.23□□□□□ -0.61
PAPD4-212ENST00000509227 ZNF598Q86UK7 904 aaKnown RBP11.23□□□□□ -0.61
PAPD4-212ENST00000509227 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
PAPD4-212ENST00000509227 RNF223E7ERA6 249 aa11.21□□□□□ -0.61
PAPD4-212ENST00000509227 FAM187AA6NFU0 413 aa11.18□□□□□ -0.62
PAPD4-212ENST00000509227 NUDT18Q6ZVK8 323 aa11.18□□□□□ -0.62
PAPD4-212ENST00000509227 PDIA6Q15084 440 aa11.17□□□□□ -0.62
PAPD4-212ENST00000509227 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
PAPD4-212ENST00000509227 SLF2Q8IX21 1173 aa11.16□□□□□ -0.62
PAPD4-212ENST00000509227 GDF9O60383 454 aa11.15□□□□□ -0.62
PAPD4-212ENST00000509227 AAASQ9NRG9 546 aa11.15□□□□□ -0.62
PAPD4-212ENST00000509227 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
PAPD4-212ENST00000509227 ANKLE1Q8NAG6 615 aa11.14□□□□□ -0.63
PAPD4-212ENST00000509227 ZNF697Q5TEC3 545 aa11.13□□□□□ -0.63
PAPD4-212ENST00000509227 ST8SIA5O15466 376 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms