RNA–Protein interactions for RNA: ENST00000509219.1

PGM3-209, Transcript of phosphoglucomutase 3, human

TSL 5

Gene PGM3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGM3-209	ENST00000509219	ITGBL1	O95965	494 aa	Predicted RBP	11.3	□□□□□ -0.6
PGM3-209	ENST00000509219	COL9A1	P20849	921 aa		11.3	□□□□□ -0.6
PGM3-209	ENST00000509219	TYW1B	Q6NUM6	668 aa		11.3	□□□□□ -0.6
PGM3-209	ENST00000509219	LAPTM4B	Q86VI4	370 aa		11.29	□□□□□ -0.6
PGM3-209	ENST00000509219	ONECUT3	O60422	494 aa	Predicted RBP	11.27	□□□□□ -0.61
PGM3-209	ENST00000509219	SOWAHB	A6NEL2	793 aa		11.25	□□□□□ -0.61
PGM3-209	ENST00000509219	NYAP1	Q6ZVC0	841 aa		11.25	□□□□□ -0.61
PGM3-209	ENST00000509219	CADPS2	Q86UW7	1296 aa		11.24	□□□□□ -0.61
PGM3-209	ENST00000509219	BCAM	P50895	628 aa		11.23	□□□□□ -0.61
PGM3-209	ENST00000509219	CAMK2B	Q13554	666 aa		11.23	□□□□□ -0.61
PGM3-209	ENST00000509219	KIAA1468	Q9P260	1216 aa		11.23	□□□□□ -0.61
PGM3-209	ENST00000509219	C6orf132	Q5T0Z8	1188 aa		11.22	□□□□□ -0.61
PGM3-209	ENST00000509219	ZFR	Q96KR1	1074 aa	Known RBP	11.22	□□□□□ -0.61
PGM3-209	ENST00000509219	EPAS1	Q99814	870 aa		11.22	□□□□□ -0.61
PGM3-209	ENST00000509219	TRIM6-TRIM34	B2RNG4	842 aa		11.17	□□□□□ -0.62
PGM3-209	ENST00000509219	WBP1L	Q9NX94	342 aa		11.17	□□□□□ -0.62
PGM3-209	ENST00000509219	DPYSL4	O14531	572 aa		11.16	□□□□□ -0.62
PGM3-209	ENST00000509219	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.16	□□□□□ -0.62
PGM3-209	ENST00000509219	KCNC4	Q03721	635 aa		11.15	□□□□□ -0.62
PGM3-209	ENST00000509219	FAM98C	Q17RN3	349 aa	Known RBP	11.15	□□□□□ -0.62
PGM3-209	ENST00000509219	DCAF8L2	P0C7V8	631 aa		11.13	□□□□□ -0.63
PGM3-209	ENST00000509219	TSR3	Q9UJK0	312 aa	Known RBP	11.12	□□□□□ -0.63
PGM3-209	ENST00000509219	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.11	□□□□□ -0.63
PGM3-209	ENST00000509219	RBM33	Q96EV2	1170 aa	Known RBP	11.1	□□□□□ -0.63
PGM3-209	ENST00000509219	LRCH3	Q96II8	777 aa		11.1	□□□□□ -0.63
PGM3-209	ENST00000509219	DDX12P	Q92771	950 aa		11.09	□□□□□ -0.63
PGM3-209	ENST00000509219	HPS5	Q9UPZ3	1129 aa		11.08	□□□□□ -0.64
PGM3-209	ENST00000509219	EN1	Q05925	392 aa	Predicted RBP	11.07	□□□□□ -0.64
PGM3-209	ENST00000509219		Q6ZNB5	142 aa		11.05	□□□□□ -0.64
PGM3-209	ENST00000509219	PACS2	Q86VP3	889 aa		11.05	□□□□□ -0.64
PGM3-209	ENST00000509219	TSKS	Q9UJT2	592 aa		11.05	□□□□□ -0.64
PGM3-209	ENST00000509219	PDIA6	Q15084	440 aa		11.04	□□□□□ -0.64
PGM3-209	ENST00000509219	NBR1	Q14596	966 aa		11.03	□□□□□ -0.64
PGM3-209	ENST00000509219	TSR1	Q2NL82	804 aa	Known RBP	11.03	□□□□□ -0.64
PGM3-209	ENST00000509219	MAP3K7	O43318	606 aa		11.02	□□□□□ -0.65
PGM3-209	ENST00000509219	LAPTM4A	Q15012	233 aa		11.01	□□□□□ -0.65
PGM3-209	ENST00000509219	SPDYE16	A6NNV3	312 aa	Predicted RBP	11	□□□□□ -0.65
PGM3-209	ENST00000509219	PPP4C	P60510	307 aa		11	□□□□□ -0.65
PGM3-209	ENST00000509219	CERK	Q8TCT0	537 aa		10.98	□□□□□ -0.65
PGM3-209	ENST00000509219	CDCA7L	Q96GN5	454 aa		10.98	□□□□□ -0.65
PGM3-209	ENST00000509219	PRSS12	P56730	875 aa		10.97	□□□□□ -0.65
PGM3-209	ENST00000509219	TJAP1	Q5JTD0	557 aa		10.97	□□□□□ -0.65
PGM3-209	ENST00000509219	SAMD7	Q7Z3H4	446 aa		10.96	□□□□□ -0.65
PGM3-209	ENST00000509219	BBX	Q8WY36	941 aa	Predicted RBP	10.95	□□□□□ -0.66
PGM3-209	ENST00000509219	FAM198A	Q9UFP1	575 aa		10.94	□□□□□ -0.66
PGM3-209	ENST00000509219	SMAP	O00193	183 aa		10.93	□□□□□ -0.66
PGM3-209	ENST00000509219	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.93	□□□□□ -0.66
PGM3-209	ENST00000509219	NBPF26	B4DH59	902 aa		10.91	□□□□□ -0.66
PGM3-209	ENST00000509219	GFRA3	O60609	400 aa		10.91	□□□□□ -0.66
PGM3-209	ENST00000509219	PRIM1	P49642	420 aa	Known RBP	10.91	□□□□□ -0.66
PGM3-209	ENST00000509219	TATDN2	Q93075	761 aa		10.91	□□□□□ -0.66
PGM3-209	ENST00000509219	MTR	Q99707	1265 aa		10.91	□□□□□ -0.66
PGM3-209	ENST00000509219	IL21	Q9HBE4	155 aa		10.91	□□□□□ -0.66
PGM3-209	ENST00000509219	C3orf80	F5H4A9	247 aa		10.9	□□□□□ -0.66
PGM3-209	ENST00000509219	LCE2B	O14633	110 aa		10.9	□□□□□ -0.66
PGM3-209	ENST00000509219	E2F4	Q16254	413 aa		10.89	□□□□□ -0.67
PGM3-209	ENST00000509219	TRAF7	Q6Q0C0	670 aa		10.89	□□□□□ -0.67
PGM3-209	ENST00000509219	PRKD2	Q9BZL6	878 aa		10.89	□□□□□ -0.67
PGM3-209	ENST00000509219	PNMA3	Q9UL41	463 aa		10.89	□□□□□ -0.67
PGM3-209	ENST00000509219	RBM27	Q9P2N5	1060 aa	Known RBP	10.88	□□□□□ -0.67
PGM3-209	ENST00000509219	PPP1R18	Q6NYC8	613 aa		10.87	□□□□□ -0.67
PGM3-209	ENST00000509219		V9GY48	417 aa	Predicted RBP	10.87	□□□□□ -0.67
PGM3-209	ENST00000509219	GRXCR2	A6NFK2	248 aa		10.86	□□□□□ -0.67
PGM3-209	ENST00000509219	NRG2	O14511	850 aa	Predicted RBP	10.85	□□□□□ -0.67
PGM3-209	ENST00000509219	OSBP	P22059	807 aa		10.84	□□□□□ -0.67
PGM3-209	ENST00000509219	HDGF	P51858	240 aa	Known RBP	10.84	□□□□□ -0.67
PGM3-209	ENST00000509219	NUDT18	Q6ZVK8	323 aa		10.84	□□□□□ -0.67
PGM3-209	ENST00000509219	SPRYD3	Q8NCJ5	442 aa		10.84	□□□□□ -0.67
PGM3-209	ENST00000509219	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.84	□□□□□ -0.67
PGM3-209	ENST00000509219	ZNF516	Q92618	1163 aa		10.83	□□□□□ -0.68
PGM3-209	ENST00000509219	APLP1	P51693	650 aa		10.82	□□□□□ -0.68
PGM3-209	ENST00000509219	CDHR5	Q9HBB8	845 aa		10.82	□□□□□ -0.68
PGM3-209	ENST00000509219	TTC13	Q8NBP0	860 aa		10.81	□□□□□ -0.68
PGM3-209	ENST00000509219	NECTIN2	Q92692	538 aa		10.81	□□□□□ -0.68
PGM3-209	ENST00000509219	RNF40	O75150	1001 aa		10.79	□□□□□ -0.68
PGM3-209	ENST00000509219	WDR70	Q9NW82	654 aa		10.78	□□□□□ -0.68
PGM3-209	ENST00000509219	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.77	□□□□□ -0.69
PGM3-209	ENST00000509219	SLF2	Q8IX21	1173 aa		10.76	□□□□□ -0.69
PGM3-209	ENST00000509219	NKX2-3	Q8TAU0	364 aa		10.76	□□□□□ -0.69
PGM3-209	ENST00000509219	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.76	□□□□□ -0.69
PGM3-209	ENST00000509219	GGCX	P38435	758 aa		10.75	□□□□□ -0.69
PGM3-209	ENST00000509219	SWT1	Q5T5J6	900 aa	Known RBP	10.75	□□□□□ -0.69
PGM3-209	ENST00000509219	PADI6	Q6TGC4	694 aa		10.74	□□□□□ -0.69
PGM3-209	ENST00000509219	TMUB1	Q9BVT8	246 aa		10.74	□□□□□ -0.69
PGM3-209	ENST00000509219	PDZRN3	Q9UPQ7	1066 aa		10.73	□□□□□ -0.69
PGM3-209	ENST00000509219	COPS2	P61201	443 aa		10.72	□□□□□ -0.69
PGM3-209	ENST00000509219	SLC4A3	P48751	1232 aa		10.71	□□□□□ -0.69
PGM3-209	ENST00000509219	EYA1	Q99502	592 aa		10.71	□□□□□ -0.69
PGM3-209	ENST00000509219	ZPR1	O75312	459 aa		10.7	□□□□□ -0.7
PGM3-209	ENST00000509219	PRR14	Q9BWN1	585 aa		10.69	□□□□□ -0.7
PGM3-209	ENST00000509219	ZNF787	Q6DD87	383 aa		10.66	□□□□□ -0.7
PGM3-209	ENST00000509219	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.65	□□□□□ -0.7
PGM3-209	ENST00000509219	CFAP44	Q96MT7	982 aa		10.65	□□□□□ -0.7
PGM3-209	ENST00000509219	PCDHB3	Q9Y5E6	796 aa		10.65	□□□□□ -0.7
PGM3-209	ENST00000509219	RNF223	E7ERA6	249 aa		10.62	□□□□□ -0.71
PGM3-209	ENST00000509219	BLOC1S3	Q6QNY0	202 aa		10.61	□□□□□ -0.71
PGM3-209	ENST00000509219	TRIM67	Q6ZTA4	783 aa		10.61	□□□□□ -0.71
PGM3-209	ENST00000509219	DNAJB2	P25686	324 aa		10.6	□□□□□ -0.71
PGM3-209	ENST00000509219	SLC19A1	P41440	591 aa		10.6	□□□□□ -0.71
PGM3-209	ENST00000509219	EMID1	Q96A84	441 aa	Predicted RBP	10.6	□□□□□ -0.71

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