RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 MS4A4AQ96JQ5 239 aa7.64□□□□□ -1.19
CALCOCO2-213ENST00000509112 KIAA0556O60303 1618 aa7.63□□□□□ -1.19
CALCOCO2-213ENST00000509112 MAGI3Q5TCQ9 1506 aa7.63□□□□□ -1.19
CALCOCO2-213ENST00000509112 DCBLD2Q96PD2 775 aa7.63□□□□□ -1.19
CALCOCO2-213ENST00000509112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.63□□□□□ -1.196e-7■■■■□ 19.3
CALCOCO2-213ENST00000509112 IRX5P78411 483 aaPredicted RBP7.62□□□□□ -1.19
CALCOCO2-213ENST00000509112 OCEL1Q9H607 264 aa7.62□□□□□ -1.19
CALCOCO2-213ENST00000509112 WDR7Q9Y4E6 1490 aa7.62□□□□□ -1.19
CALCOCO2-213ENST00000509112 RAPGEF2Q9Y4G8 1499 aa7.62□□□□□ -1.19
CALCOCO2-213ENST00000509112 SLC39A7Q92504 469 aa7.61□□□□□ -1.19
CALCOCO2-213ENST00000509112 PPP1R37O75864 691 aa7.6□□□□□ -1.19
CALCOCO2-213ENST00000509112 P3H3Q8IVL6 736 aa7.6□□□□□ -1.19
CALCOCO2-213ENST00000509112 PDCD7Q8N8D1 485 aaKnown RBP7.6□□□□□ -1.19
CALCOCO2-213ENST00000509112 BCANQ96GW7 911 aa7.6□□□□□ -1.19
CALCOCO2-213ENST00000509112 CTTNBP2Q8WZ74 1663 aa7.6□□□□□ -1.19
CALCOCO2-213ENST00000509112 ABCA8O94911 1581 aa7.59□□□□□ -1.19
CALCOCO2-213ENST00000509112 C7P10643 843 aa7.59□□□□□ -1.19
CALCOCO2-213ENST00000509112 GOLGA3Q08378 1498 aa7.59□□□□□ -1.19
CALCOCO2-213ENST00000509112 ARAP3Q8WWN8 1544 aa7.58□□□□□ -1.2
CALCOCO2-213ENST00000509112 PHLDB1Q86UU1 1377 aa7.58□□□□□ -1.2
CALCOCO2-213ENST00000509112 TMEM121BQ9BXQ6 578 aaPredicted RBP7.57□□□□□ -1.2
CALCOCO2-213ENST00000509112 CD109Q6YHK3 1445 aa7.57□□□□□ -1.2
CALCOCO2-213ENST00000509112 PLCG2P16885 1265 aa7.56□□□□□ -1.2
CALCOCO2-213ENST00000509112 PDE4AP27815 886 aa7.56□□□□□ -1.2
CALCOCO2-213ENST00000509112 L3MBTL3Q96JM7 780 aaPredicted RBP7.56□□□□□ -1.2
CALCOCO2-213ENST00000509112 CRISPLD2Q9H0B8 497 aa7.56□□□□□ -1.2
CALCOCO2-213ENST00000509112 WDR70Q9NW82 654 aa7.56□□□□□ -1.2
CALCOCO2-213ENST00000509112 ADAMTSL3P82987 1691 aa7.55□□□□□ -1.2
CALCOCO2-213ENST00000509112 MFSD10Q14728 455 aa7.55□□□□□ -1.2
CALCOCO2-213ENST00000509112 CADPS2Q86UW7 1296 aa7.55□□□□□ -1.2
CALCOCO2-213ENST00000509112 KIF21BO75037 1637 aa7.54□□□□□ -1.2
CALCOCO2-213ENST00000509112 ABCA9Q8IUA7 1624 aa7.54□□□□□ -1.2
CALCOCO2-213ENST00000509112 TTBK1Q5TCY1 1321 aaPredicted RBP7.53□□□□□ -1.2
CALCOCO2-213ENST00000509112 MICALL2Q8IY33 904 aa7.53□□□□□ -1.2
CALCOCO2-213ENST00000509112 FBXO41Q8TF61 875 aa7.53□□□□□ -1.2
CALCOCO2-213ENST00000509112 G3V3G9 751 aa7.52□□□□□ -1.21
CALCOCO2-213ENST00000509112 SEC24BO95487 1268 aa7.52□□□□□ -1.21
CALCOCO2-213ENST00000509112 PELP1Q8IZL8 1130 aaKnown RBP7.52□□□□□ -1.21
CALCOCO2-213ENST00000509112 BOLA1Q9Y3E2 137 aa7.52□□□□□ -1.21
CALCOCO2-213ENST00000509112 NEO1Q92859 1461 aa7.51□□□□□ -1.21
CALCOCO2-213ENST00000509112 PRXQ9BXM0 1461 aa7.51□□□□□ -1.21
CALCOCO2-213ENST00000509112 POTEIP0CG38 1075 aa7.51□□□□□ -1.21
CALCOCO2-213ENST00000509112 GPHNQ9NQX3 736 aaPredicted RBP7.51□□□□□ -1.21
CALCOCO2-213ENST00000509112 ARIH1Q9Y4X5 557 aaPredicted RBP7.51□□□□□ -1.21
CALCOCO2-213ENST00000509112 BCORL1Q5H9F3 1711 aa7.51□□□□□ -1.21
CALCOCO2-213ENST00000509112 NCKAP5LQ9HCH0 1330 aa7.51□□□□□ -1.21
CALCOCO2-213ENST00000509112 PTPRMP28827 1452 aa7.5□□□□□ -1.21
CALCOCO2-213ENST00000509112 METRNQ9UJH8 293 aa7.5□□□□□ -1.21
CALCOCO2-213ENST00000509112 DPY19L2Q6NUT2 758 aa7.49□□□□□ -1.21
CALCOCO2-213ENST00000509112 DDX27Q96GQ7 796 aaKnown RBP7.49□□□□□ -1.21
CALCOCO2-213ENST00000509112 ATP10BO94823 1461 aa7.49□□□□□ -1.21
CALCOCO2-213ENST00000509112 PCF11O94913 1555 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-213ENST00000509112 CAMK2BQ13554 666 aa7.48□□□□□ -1.21
CALCOCO2-213ENST00000509112 E2F4Q16254 413 aa7.48□□□□□ -1.21
CALCOCO2-213ENST00000509112 SAMD9Q5K651 1589 aa7.48□□□□□ -1.21
CALCOCO2-213ENST00000509112 FAM9AQ8IZU1 332 aaPredicted RBP7.48□□□□□ -1.21
CALCOCO2-213ENST00000509112 ARHGEF1Q92888 912 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-213ENST00000509112 FRMPD1Q5SYB0 1578 aa7.47□□□□□ -1.21
CALCOCO2-213ENST00000509112 NBR1Q14596 966 aa7.47□□□□□ -1.21
CALCOCO2-213ENST00000509112 KCNH8Q96L42 1107 aa7.47□□□□□ -1.21
CALCOCO2-213ENST00000509112 LARP6Q9BRS8 491 aaKnown RBP7.47□□□□□ -1.21
CALCOCO2-213ENST00000509112 COLQQ9Y215 455 aaPredicted RBP7.47□□□□□ -1.21
CALCOCO2-213ENST00000509112 CFAP74Q9C0B2 1584 aa7.46□□□□□ -1.21
CALCOCO2-213ENST00000509112 RAPGEF6Q8TEU7 1601 aa7.46□□□□□ -1.21
CALCOCO2-213ENST00000509112 POTEFA5A3E0 1075 aa7.46□□□□□ -1.22
CALCOCO2-213ENST00000509112 FOXK1P85037 733 aa7.46□□□□□ -1.22
CALCOCO2-213ENST00000509112 LMTK3Q96Q04 1460 aa7.46□□□□□ -1.22
CALCOCO2-213ENST00000509112 RICTORQ6R327 1708 aa7.46□□□□□ -1.22
CALCOCO2-213ENST00000509112 ARHGEF40Q8TER5 1519 aa7.46□□□□□ -1.22
CALCOCO2-213ENST00000509112 MADDQ8WXG6 1647 aa7.45□□□□□ -1.22
CALCOCO2-213ENST00000509112 KIF3CO14782 793 aa7.45□□□□□ -1.22
CALCOCO2-213ENST00000509112 TMC2Q8TDI7 906 aa7.45□□□□□ -1.22
CALCOCO2-213ENST00000509112 FHOD3Q2V2M9 1422 aa7.44□□□□□ -1.22
CALCOCO2-213ENST00000509112 ZMYM4Q5VZL5 1548 aa7.44□□□□□ -1.22
CALCOCO2-213ENST00000509112 KCNV2Q8TDN2 545 aa7.44□□□□□ -1.22
CALCOCO2-213ENST00000509112 MAGI2Q86UL8 1455 aa7.43□□□□□ -1.22
CALCOCO2-213ENST00000509112 PPP1R15BQ5SWA1 713 aa7.43□□□□□ -1.22
CALCOCO2-213ENST00000509112 RIMS1Q86UR5 1692 aaKnown RBP7.42□□□□□ -1.22
CALCOCO2-213ENST00000509112 POGZQ7Z3K3 1410 aa7.42□□□□□ -1.22
CALCOCO2-213ENST00000509112 DENND4BO75064 1496 aaPredicted RBP7.42□□□□□ -1.22
CALCOCO2-213ENST00000509112 EFCAB5A4FU69 1503 aa7.42□□□□□ -1.22
CALCOCO2-213ENST00000509112 RAPGEF3O95398 923 aa7.41□□□□□ -1.22
CALCOCO2-213ENST00000509112 FANCAO15360 1455 aa7.41□□□□□ -1.22
CALCOCO2-213ENST00000509112 NUP153P49790 1475 aaKnown RBP7.41□□□□□ -1.22
CALCOCO2-213ENST00000509112 TTC37Q6PGP7 1564 aa7.41□□□□□ -1.22
CALCOCO2-213ENST00000509112 C3orf67Q6ZVT6 689 aa7.4□□□□□ -1.22
CALCOCO2-213ENST00000509112 AKNAQ7Z591 1439 aa7.4□□□□□ -1.22
CALCOCO2-213ENST00000509112 C2orf72A6NCS6 295 aa7.39□□□□□ -1.23
CALCOCO2-213ENST00000509112 DSG2Q14126 1118 aa7.39□□□□□ -1.23
CALCOCO2-213ENST00000509112 FER1L4A9Z1Z3 1794 aa7.38□□□□□ -1.23
CALCOCO2-213ENST00000509112 ZFYVE16Q7Z3T8 1539 aa7.38□□□□□ -1.23
CALCOCO2-213ENST00000509112 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.38□□□□□ -1.23
CALCOCO2-213ENST00000509112 EEA1Q15075 1411 aa7.38□□□□□ -1.23
CALCOCO2-213ENST00000509112 SIGLEC1Q9BZZ2 1709 aa7.38□□□□□ -1.23
CALCOCO2-213ENST00000509112 PREX1Q8TCU6 1659 aa7.38□□□□□ -1.23
CALCOCO2-213ENST00000509112 SETD1BQ9UPS6 1966 aaKnown RBP7.37□□□□□ -1.23
CALCOCO2-213ENST00000509112 PLEKHD1A6NEE1 506 aa7.37□□□□□ -1.23
CALCOCO2-213ENST00000509112 MAMSTRQ6ZN01 415 aa7.37□□□□□ -1.23
CALCOCO2-213ENST00000509112 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.37□□□□□ -1.23
CALCOCO2-213ENST00000509112 ARHGEF12Q9NZN5 1544 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms