RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 TMC2Q8TDI7 906 aa12.82□□□□□ -0.36
CCSER1-208ENST00000509109 KIAA0586Q9BVV6 1533 aa12.81□□□□□ -0.36
CCSER1-208ENST00000509109 IGF1RP08069 1367 aa12.81□□□□□ -0.36
CCSER1-208ENST00000509109 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
CCSER1-208ENST00000509109 EMP3P54852 163 aa12.79□□□□□ -0.36
CCSER1-208ENST00000509109 RIMBP2O15034 1052 aa12.77□□□□□ -0.37
CCSER1-208ENST00000509109 CARMIL1Q5VZK9 1371 aa12.75□□□□□ -0.37
CCSER1-208ENST00000509109 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
CCSER1-208ENST00000509109 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
CCSER1-208ENST00000509109 IQGAP2Q13576 1575 aa12.74□□□□□ -0.37
CCSER1-208ENST00000509109 FAM205CA6NFA0 338 aa12.74□□□□□ -0.37
CCSER1-208ENST00000509109 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
CCSER1-208ENST00000509109 MAPKBP1O60336 1514 aa12.73□□□□□ -0.37
CCSER1-208ENST00000509109 BBXQ8WY36 941 aaPredicted RBP12.73□□□□□ -0.37
CCSER1-208ENST00000509109 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
CCSER1-208ENST00000509109 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.37
CCSER1-208ENST00000509109 ARSIQ5FYB1 569 aa12.71□□□□□ -0.37
CCSER1-208ENST00000509109 KHSRPQ92945 711 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCSER1-208ENST00000509109 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
CCSER1-208ENST00000509109 GPHNQ9NQX3 736 aaPredicted RBP12.7□□□□□ -0.38
CCSER1-208ENST00000509109 POTEB3A0JP26 581 aa12.69□□□□□ -0.38
CCSER1-208ENST00000509109 POTEBQ6S5H4 581 aa12.69□□□□□ -0.38
CCSER1-208ENST00000509109 HS3ST6Q96QI5 342 aa12.69□□□□□ -0.38
CCSER1-208ENST00000509109 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
CCSER1-208ENST00000509109 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
CCSER1-208ENST00000509109 DSG2Q14126 1118 aa12.68□□□□□ -0.38
CCSER1-208ENST00000509109 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
CCSER1-208ENST00000509109 DIP2BQ9P265 1576 aa12.67□□□□□ -0.38
CCSER1-208ENST00000509109 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
CCSER1-208ENST00000509109 ABCC10Q5T3U5 1492 aa12.66□□□□□ -0.38
CCSER1-208ENST00000509109 TNIKQ9UKE5 1360 aa12.66□□□□□ -0.38
CCSER1-208ENST00000509109 ERBB3P21860 1342 aa12.65□□□□□ -0.38
CCSER1-208ENST00000509109 PTPRGP23470 1445 aa12.65□□□□□ -0.38
CCSER1-208ENST00000509109 FOXK1P85037 733 aa12.65□□□□□ -0.38
CCSER1-208ENST00000509109 NCKAP5LQ9HCH0 1330 aa12.63□□□□□ -0.39
CCSER1-208ENST00000509109 UGGT2Q9NYU1 1516 aa12.63□□□□□ -0.39
CCSER1-208ENST00000509109 CRISPLD2Q9H0B8 497 aa12.63□□□□□ -0.39
CCSER1-208ENST00000509109 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
CCSER1-208ENST00000509109 PCDHGA4Q9Y5G9 962 aa12.62□□□□□ -0.39
CCSER1-208ENST00000509109 KIAA0556O60303 1618 aa12.62□□□□□ -0.39
CCSER1-208ENST00000509109 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
CCSER1-208ENST00000509109 NUDT7P0C024 238 aa12.61□□□□□ -0.39
CCSER1-208ENST00000509109 VARS2Q5ST30 1063 aaKnown RBP12.61□□□□□ -0.39
CCSER1-208ENST00000509109 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
CCSER1-208ENST00000509109 DISP1Q96F81 1524 aa12.61□□□□□ -0.39
CCSER1-208ENST00000509109 UHRF1BP1LA0JNW5 1464 aa12.6□□□□□ -0.39
CCSER1-208ENST00000509109 SLC34A2O95436 690 aa12.6□□□□□ -0.39
CCSER1-208ENST00000509109 PDE4AP27815 886 aa12.6□□□□□ -0.39
CCSER1-208ENST00000509109 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
CCSER1-208ENST00000509109 SPRYD3Q8NCJ5 442 aa12.6□□□□□ -0.39
CCSER1-208ENST00000509109 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
CCSER1-208ENST00000509109 LARP6Q9BRS8 491 aaKnown RBP12.59□□□□□ -0.39
CCSER1-208ENST00000509109 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
CCSER1-208ENST00000509109 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
CCSER1-208ENST00000509109 UACAQ9BZF9 1416 aa12.58□□□□□ -0.4
CCSER1-208ENST00000509109 GOLGA3Q08378 1498 aa12.58□□□□□ -0.4
CCSER1-208ENST00000509109 PLB1Q6P1J6 1458 aa12.57□□□□□ -0.4
CCSER1-208ENST00000509109 TTBK1Q5TCY1 1321 aaPredicted RBP12.57□□□□□ -0.4
CCSER1-208ENST00000509109 TSPOAP1O95153 1857 aa12.57□□□□□ -0.4
CCSER1-208ENST00000509109 KDM6BO15054 1643 aa12.56□□□□□ -0.4
CCSER1-208ENST00000509109 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
CCSER1-208ENST00000509109 ASXL2Q76L83 1435 aa12.54□□□□□ -0.4
CCSER1-208ENST00000509109 ZNF316A6NFI3 1004 aaPredicted RBP12.54□□□□□ -0.4
CCSER1-208ENST00000509109 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCSER1-208ENST00000509109 GLI2P10070 1586 aa12.54□□□□□ -0.4
CCSER1-208ENST00000509109 ZCCHC11Q5TAX3 1644 aaKnown RBP12.54□□□□□ -0.4
CCSER1-208ENST00000509109 KDM5BQ9UGL1 1544 aa12.53□□□□□ -0.4
CCSER1-208ENST00000509109 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
CCSER1-208ENST00000509109 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
CCSER1-208ENST00000509109 KRTAP3-3Q9BYR6 98 aa12.52□□□□□ -0.41
CCSER1-208ENST00000509109 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.41
CCSER1-208ENST00000509109 LHX6Q9UPM6 363 aa12.52□□□□□ -0.41
CCSER1-208ENST00000509109 EEA1Q15075 1411 aa12.5□□□□□ -0.41
CCSER1-208ENST00000509109 MAP3K4Q9Y6R4 1608 aa12.49□□□□□ -0.41
CCSER1-208ENST00000509109 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
CCSER1-208ENST00000509109 SPNS2Q8IVW8 549 aa12.48□□□□□ -0.41
CCSER1-208ENST00000509109 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
CCSER1-208ENST00000509109 PPRC1Q5VV67 1664 aaKnown RBP12.48□□□□□ -0.41
CCSER1-208ENST00000509109 EPRSP07814 1512 aaKnown RBP12.47□□□□□ -0.41
CCSER1-208ENST00000509109 TEX14Q8IWB6 1497 aa12.47□□□□□ -0.41
CCSER1-208ENST00000509109 TBC1D12O60347 775 aa12.47□□□□□ -0.41
CCSER1-208ENST00000509109 MFSD10Q14728 455 aa12.47□□□□□ -0.41
CCSER1-208ENST00000509109 ABCA8O94911 1581 aa12.47□□□□□ -0.41
CCSER1-208ENST00000509109 WDR7Q9Y4E6 1490 aa12.46□□□□□ -0.41
CCSER1-208ENST00000509109 ZNF687Q8N1G0 1237 aa12.46□□□□□ -0.41
CCSER1-208ENST00000509109 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
CCSER1-208ENST00000509109 SAMD9Q5K651 1589 aa12.44□□□□□ -0.42
CCSER1-208ENST00000509109 CFAP43Q8NDM7 1665 aa12.44□□□□□ -0.42
CCSER1-208ENST00000509109 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
CCSER1-208ENST00000509109 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
CCSER1-208ENST00000509109 KIF21BO75037 1637 aa12.4□□□□□ -0.42
CCSER1-208ENST00000509109 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
CCSER1-208ENST00000509109 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
CCSER1-208ENST00000509109 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
CCSER1-208ENST00000509109 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
CCSER1-208ENST00000509109 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
CCSER1-208ENST00000509109 CD109Q6YHK3 1445 aa12.35□□□□□ -0.43
CCSER1-208ENST00000509109 EVI5O60447 810 aa12.34□□□□□ -0.43
CCSER1-208ENST00000509109 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
CCSER1-208ENST00000509109 ANKRD13DQ6ZTN6 518 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms