RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 ITGBL1O95965 494 aaPredicted RBP7.57□□□□□ -1.2
DEPDC1B-204ENST00000509006 SOWAHBA6NEL2 793 aa7.54□□□□□ -1.2
DEPDC1B-204ENST00000509006 TYW1BQ6NUM6 668 aa7.54□□□□□ -1.2
DEPDC1B-204ENST00000509006 PHF14O94880 888 aa7.53□□□□□ -1.2
DEPDC1B-204ENST00000509006 CADPS2Q86UW7 1296 aa7.53□□□□□ -1.2
DEPDC1B-204ENST00000509006 FBXW7Q969H0 707 aa7.53□□□□□ -1.2
DEPDC1B-204ENST00000509006 ZFRQ96KR1 1074 aaKnown RBP7.53□□□□□ -1.2
DEPDC1B-204ENST00000509006 KIAA1468Q9P260 1216 aa7.53□□□□□ -1.2
DEPDC1B-204ENST00000509006 SEPT9Q9UHD8 586 aaPredicted RBP7.53□□□□□ -1.2
DEPDC1B-204ENST00000509006 LAPTM4BQ86VI4 370 aa7.52□□□□□ -1.21
DEPDC1B-204ENST00000509006 WBP1LQ9NX94 342 aa7.52□□□□□ -1.21
DEPDC1B-204ENST00000509006 Q6ZNB5 142 aa7.5□□□□□ -1.21
DEPDC1B-204ENST00000509006 C6orf132Q5T0Z8 1188 aa7.49□□□□□ -1.21
DEPDC1B-204ENST00000509006 NYAP1Q6ZVC0 841 aa7.48□□□□□ -1.21
DEPDC1B-204ENST00000509006 TRIM6-TRIM34B2RNG4 842 aa7.47□□□□□ -1.21
DEPDC1B-204ENST00000509006 DPYSL4O14531 572 aa7.47□□□□□ -1.21
DEPDC1B-204ENST00000509006 KCNC4Q03721 635 aa7.47□□□□□ -1.21
DEPDC1B-204ENST00000509006 RBM33Q96EV2 1170 aaKnown RBP7.47□□□□□ -1.21
DEPDC1B-204ENST00000509006 FAM98CQ17RN3 349 aaKnown RBP7.46□□□□□ -1.22
DEPDC1B-204ENST00000509006 HPS5Q9UPZ3 1129 aa7.46□□□□□ -1.22
DEPDC1B-204ENST00000509006 ONECUT3O60422 494 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-204ENST00000509006 CAMK2BQ13554 666 aa7.45□□□□□ -1.22
DEPDC1B-204ENST00000509006 EPAS1Q99814 870 aa7.45□□□□□ -1.22
DEPDC1B-204ENST00000509006 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-204ENST00000509006 DCAF8L2P0C7V8 631 aa7.44□□□□□ -1.22
DEPDC1B-204ENST00000509006 DDX12PQ92771 950 aa7.44□□□□□ -1.22
DEPDC1B-204ENST00000509006 LRCH3Q96II8 777 aa7.44□□□□□ -1.22
DEPDC1B-204ENST00000509006 TSR3Q9UJK0 312 aaKnown RBP7.44□□□□□ -1.22
DEPDC1B-204ENST00000509006 LCE2BO14633 110 aa7.42□□□□□ -1.22
DEPDC1B-204ENST00000509006 TSR1Q2NL82 804 aaKnown RBP7.42□□□□□ -1.22
DEPDC1B-204ENST00000509006 TSKSQ9UJT2 592 aa7.41□□□□□ -1.22
DEPDC1B-204ENST00000509006 NBR1Q14596 966 aa7.4□□□□□ -1.22
DEPDC1B-204ENST00000509006 EN1Q05925 392 aaPredicted RBP7.39□□□□□ -1.23
DEPDC1B-204ENST00000509006 SMAPO00193 183 aa7.38□□□□□ -1.23
DEPDC1B-204ENST00000509006 MAP3K7O43318 606 aa7.38□□□□□ -1.23
DEPDC1B-204ENST00000509006 GFRA3O60609 400 aa7.37□□□□□ -1.23
DEPDC1B-204ENST00000509006 PPP4CP60510 307 aa7.37□□□□□ -1.23
DEPDC1B-204ENST00000509006 PACS2Q86VP3 889 aa7.37□□□□□ -1.23
DEPDC1B-204ENST00000509006 LAPTM4AQ15012 233 aa7.36□□□□□ -1.23
DEPDC1B-204ENST00000509006 TJAP1Q5JTD0 557 aa7.36□□□□□ -1.23
DEPDC1B-204ENST00000509006 SAMD7Q7Z3H4 446 aa7.36□□□□□ -1.23
DEPDC1B-204ENST00000509006 PRKD2Q9BZL6 878 aa7.35□□□□□ -1.23
DEPDC1B-204ENST00000509006 FAM198AQ9UFP1 575 aa7.35□□□□□ -1.23
DEPDC1B-204ENST00000509006 C3orf80F5H4A9 247 aa7.34□□□□□ -1.23
DEPDC1B-204ENST00000509006 PRIM1P49642 420 aaKnown RBP7.34□□□□□ -1.23
DEPDC1B-204ENST00000509006 PDIA6Q15084 440 aa7.34□□□□□ -1.23
DEPDC1B-204ENST00000509006 TRAF7Q6Q0C0 670 aa7.34□□□□□ -1.23
DEPDC1B-204ENST00000509006 CDCA7LQ96GN5 454 aa7.34□□□□□ -1.23
DEPDC1B-204ENST00000509006 MTRQ99707 1265 aa7.34□□□□□ -1.23
DEPDC1B-204ENST00000509006 PRSS12P56730 875 aa7.32□□□□□ -1.24
DEPDC1B-204ENST00000509006 PPP1R18Q6NYC8 613 aa7.32□□□□□ -1.24
DEPDC1B-204ENST00000509006 IL21Q9HBE4 155 aa7.31□□□□□ -1.24
DEPDC1B-204ENST00000509006 NRG2O14511 850 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1B-204ENST00000509006 RNF40O75150 1001 aa7.3□□□□□ -1.24
DEPDC1B-204ENST00000509006 ZNF516Q92618 1163 aa7.3□□□□□ -1.24
DEPDC1B-204ENST00000509006 TATDN2Q93075 761 aa7.3□□□□□ -1.24
DEPDC1B-204ENST00000509006 PNMA3Q9UL41 463 aa7.3□□□□□ -1.24
DEPDC1B-204ENST00000509006 CDHR5Q9HBB8 845 aa7.29□□□□□ -1.24
DEPDC1B-204ENST00000509006 NBPF26B4DH59 902 aa7.28□□□□□ -1.24
DEPDC1B-204ENST00000509006 APLP1P51693 650 aa7.28□□□□□ -1.24
DEPDC1B-204ENST00000509006 GRXCR2A6NFK2 248 aa7.27□□□□□ -1.25
DEPDC1B-204ENST00000509006 SPDYE16A6NNV3 312 aaPredicted RBP7.27□□□□□ -1.25
DEPDC1B-204ENST00000509006 NKX2-3Q8TAU0 364 aa7.27□□□□□ -1.25
DEPDC1B-204ENST00000509006 NUDT18Q6ZVK8 323 aa7.26□□□□□ -1.25
DEPDC1B-204ENST00000509006 CERKQ8TCT0 537 aa7.26□□□□□ -1.25
DEPDC1B-204ENST00000509006 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.26□□□□□ -1.25
DEPDC1B-204ENST00000509006 V9GY48 417 aaPredicted RBP7.26□□□□□ -1.25
DEPDC1B-204ENST00000509006 COPS2P61201 443 aa7.23□□□□□ -1.25
DEPDC1B-204ENST00000509006 PDZRN3Q9UPQ7 1066 aa7.23□□□□□ -1.25
DEPDC1B-204ENST00000509006 OSBPP22059 807 aa7.22□□□□□ -1.25
DEPDC1B-204ENST00000509006 E2F4Q16254 413 aa7.22□□□□□ -1.25
DEPDC1B-204ENST00000509006 SWT1Q5T5J6 900 aaKnown RBP7.21□□□□□ -1.26
DEPDC1B-204ENST00000509006 HDGFP51858 240 aaKnown RBP7.2□□□□□ -1.26
DEPDC1B-204ENST00000509006 ZNF787Q6DD87 383 aa7.2□□□□□ -1.26
DEPDC1B-204ENST00000509006 PADI6Q6TGC4 694 aa7.2□□□□□ -1.26
DEPDC1B-204ENST00000509006 BBXQ8WY36 941 aaPredicted RBP7.2□□□□□ -1.26
DEPDC1B-204ENST00000509006 RBM27Q9P2N5 1060 aaKnown RBP7.2□□□□□ -1.26
DEPDC1B-204ENST00000509006 ARIH1Q9Y4X5 557 aaPredicted RBP7.19□□□□□ -1.26
DEPDC1B-204ENST00000509006 GGCXP38435 758 aa7.18□□□□□ -1.26
DEPDC1B-204ENST00000509006 TTC13Q8NBP0 860 aa7.18□□□□□ -1.26
DEPDC1B-204ENST00000509006 SLF2Q8IX21 1173 aa7.17□□□□□ -1.26
DEPDC1B-204ENST00000509006 NPDC1Q9NQX5 325 aaPredicted RBP7.17□□□□□ -1.26
DEPDC1B-204ENST00000509006 ZPR1O75312 459 aa7.16□□□□□ -1.26
DEPDC1B-204ENST00000509006 TRIM67Q6ZTA4 783 aa7.16□□□□□ -1.26
DEPDC1B-204ENST00000509006 NECTIN2Q92692 538 aa7.16□□□□□ -1.26
DEPDC1B-204ENST00000509006 ZNF775Q96BV0 537 aaPredicted RBP7.16□□□□□ -1.26
DEPDC1B-204ENST00000509006 EMID1Q96A84 441 aaPredicted RBP7.15□□□□□ -1.26
DEPDC1B-204ENST00000509006 RNF223E7ERA6 249 aa7.14□□□□□ -1.27
DEPDC1B-204ENST00000509006 TLL1O43897 1013 aa7.14□□□□□ -1.27
DEPDC1B-204ENST00000509006 SPRYD3Q8NCJ5 442 aa7.14□□□□□ -1.27
DEPDC1B-204ENST00000509006 TMUB1Q9BVT8 246 aa7.14□□□□□ -1.27
DEPDC1B-204ENST00000509006 AMER1Q5JTC6 1135 aaPredicted RBP7.13□□□□□ -1.27
DEPDC1B-204ENST00000509006 BLOC1S3Q6QNY0 202 aa7.13□□□□□ -1.27
DEPDC1B-204ENST00000509006 EYA1Q99502 592 aa7.13□□□□□ -1.27
DEPDC1B-204ENST00000509006 WDR70Q9NW82 654 aa7.13□□□□□ -1.27
DEPDC1B-204ENST00000509006 PCDHB3Q9Y5E6 796 aa7.13□□□□□ -1.27
DEPDC1B-204ENST00000509006 SLC19A1P41440 591 aa7.12□□□□□ -1.27
DEPDC1B-204ENST00000509006 RTN4Q9NQC3 1192 aaKnown RBP7.12□□□□□ -1.27
DEPDC1B-204ENST00000509006 SLC4A3P48751 1232 aa7.11□□□□□ -1.27
DEPDC1B-204ENST00000509006 PPEF1O14829 653 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms