RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 AFAP1Q8N556 730 aa16.29■□□□□ 0.2
PRPF40B-203ENST00000508736 IQGAP3Q86VI3 1631 aa16.29■□□□□ 0.2
PRPF40B-203ENST00000508736 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
PRPF40B-203ENST00000508736 DDX10Q13206 875 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-203ENST00000508736 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.19
PRPF40B-203ENST00000508736 INO80Q9ULG1 1556 aaPredicted RBP16.27■□□□□ 0.19
PRPF40B-203ENST00000508736 MYT1LQ9UL68 1186 aa16.25■□□□□ 0.19
PRPF40B-203ENST00000508736 ATP7AQ04656 1500 aa16.24■□□□□ 0.19
PRPF40B-203ENST00000508736 COL17A1Q9UMD9 1497 aaPredicted RBP16.23■□□□□ 0.19
PRPF40B-203ENST00000508736 ATP10AO60312 1499 aa16.22■□□□□ 0.19
PRPF40B-203ENST00000508736 ANP32CO43423 234 aa16.21■□□□□ 0.19
PRPF40B-203ENST00000508736 DEPDC5O75140 1603 aa16.21■□□□□ 0.19
PRPF40B-203ENST00000508736 UHRF1BP1Q6BDS2 1440 aa16.21■□□□□ 0.19
PRPF40B-203ENST00000508736 POGZQ7Z3K3 1410 aa16.21■□□□□ 0.19
PRPF40B-203ENST00000508736 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
PRPF40B-203ENST00000508736 EIF4G2P78344 907 aaKnown RBP eCLIP16.2■□□□□ 0.18
PRPF40B-203ENST00000508736 ZNF518AQ6AHZ1 1483 aa16.2■□□□□ 0.18
PRPF40B-203ENST00000508736 NBPF8Q3BBV2 869 aa16.2■□□□□ 0.18
PRPF40B-203ENST00000508736 EIF2AK4Q9P2K8 1649 aaKnown RBP16.19■□□□□ 0.18
PRPF40B-203ENST00000508736 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
PRPF40B-203ENST00000508736 KDM5CP41229 1560 aa16.17■□□□□ 0.18
PRPF40B-203ENST00000508736 CCDC144AA2RUR9 1427 aa16.17■□□□□ 0.18
PRPF40B-203ENST00000508736 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
PRPF40B-203ENST00000508736 HSPA5P11021 654 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-203ENST00000508736 DHX29Q7Z478 1369 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-203ENST00000508736 SPATA31E1Q6ZUB1 1445 aa16.15■□□□□ 0.18
PRPF40B-203ENST00000508736 RICTORQ6R327 1708 aa16.15■□□□□ 0.18
PRPF40B-203ENST00000508736 VWDEQ8N2E2 1590 aa16.15■□□□□ 0.18
PRPF40B-203ENST00000508736 KIDINS220Q9ULH0 1771 aa16.14■□□□□ 0.17
PRPF40B-203ENST00000508736 MLH3Q9UHC1 1453 aa16.14■□□□□ 0.17
PRPF40B-203ENST00000508736 FRMPD1Q5SYB0 1578 aa16.14■□□□□ 0.17
PRPF40B-203ENST00000508736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRPF40B-203ENST00000508736 RALGAPBQ86X10 1494 aa16.13■□□□□ 0.17
PRPF40B-203ENST00000508736 POLR1AO95602 1720 aaPredicted RBP16.13■□□□□ 0.17
PRPF40B-203ENST00000508736 PRDM15P57071 1507 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-203ENST00000508736 TET3O43151 1660 aa16.11■□□□□ 0.17
PRPF40B-203ENST00000508736 KANK1Q14678 1352 aa16.1■□□□□ 0.17
PRPF40B-203ENST00000508736 YEATS2Q9ULM3 1422 aa16.09■□□□□ 0.17
PRPF40B-203ENST00000508736 HECW2Q9P2P5 1572 aa16.09■□□□□ 0.17
PRPF40B-203ENST00000508736 E9PCH4 1651 aa16.09■□□□□ 0.17
PRPF40B-203ENST00000508736 PTPRTO14522 1441 aa16.09■□□□□ 0.17
PRPF40B-203ENST00000508736 MROH1Q8NDA8 1641 aa16.09■□□□□ 0.17
PRPF40B-203ENST00000508736 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.17
PRPF40B-203ENST00000508736 ZMYM4Q5VZL5 1548 aa16.08■□□□□ 0.17
PRPF40B-203ENST00000508736 TRPM2O94759 1503 aa16.08■□□□□ 0.16
PRPF40B-203ENST00000508736 A2MP01023 1474 aa16.08■□□□□ 0.16
PRPF40B-203ENST00000508736 BCORL1Q5H9F3 1711 aa16.07■□□□□ 0.16
PRPF40B-203ENST00000508736 RNF17Q9BXT8 1623 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-203ENST00000508736 SUPT16HQ9Y5B9 1047 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-203ENST00000508736 LMTK2Q8IWU2 1503 aa16.06■□□□□ 0.16
PRPF40B-203ENST00000508736 KIF3BO15066 747 aa16.05■□□□□ 0.16
PRPF40B-203ENST00000508736 DCAF11Q8TEB1 546 aa16.05■□□□□ 0.16
PRPF40B-203ENST00000508736 CCDC7Q96M83 1385 aa16.05■□□□□ 0.16
PRPF40B-203ENST00000508736 NEURL4Q96JN8 1562 aa16.05■□□□□ 0.16
PRPF40B-203ENST00000508736 PRAG1Q86YV5 1406 aa16.04■□□□□ 0.16
PRPF40B-203ENST00000508736 CNTLNQ9NXG0 1405 aa16.04■□□□□ 0.16
PRPF40B-203ENST00000508736 SPHKAPQ2M3C7 1700 aa16.04■□□□□ 0.16
PRPF40B-203ENST00000508736 USP47Q96K76 1375 aa16.04■□□□□ 0.16
PRPF40B-203ENST00000508736 ARID4BQ4LE39 1312 aaPredicted RBP16.03■□□□□ 0.16
PRPF40B-203ENST00000508736 ABCA6Q8N139 1617 aa16.03■□□□□ 0.16
PRPF40B-203ENST00000508736 STAC3Q96MF2 364 aa16.02■□□□□ 0.16
PRPF40B-203ENST00000508736 DIP2CQ9Y2E4 1556 aa16.02■□□□□ 0.15
PRPF40B-203ENST00000508736 TRPM1Q7Z4N2 1603 aa16.02■□□□□ 0.15
PRPF40B-203ENST00000508736 LAMC1P11047 1609 aa16.01■□□□□ 0.15
PRPF40B-203ENST00000508736 EFCAB6Q5THR3 1501 aa16.01■□□□□ 0.15
PRPF40B-203ENST00000508736 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
PRPF40B-203ENST00000508736 GPRASP1Q5JY77 1395 aa16■□□□□ 0.15
PRPF40B-203ENST00000508736 CEP152O94986 1710 aa16■□□□□ 0.15
PRPF40B-203ENST00000508736 ARHGEF40Q8TER5 1519 aa15.99■□□□□ 0.15
PRPF40B-203ENST00000508736 C11orf95C9JLR9 678 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-203ENST00000508736 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
PRPF40B-203ENST00000508736 KDM2AQ9Y2K7 1162 aa15.98■□□□□ 0.15
PRPF40B-203ENST00000508736 KIF7Q2M1P5 1343 aa15.98■□□□□ 0.15
PRPF40B-203ENST00000508736 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
PRPF40B-203ENST00000508736 GGT6Q6P531 493 aa15.97■□□□□ 0.15
PRPF40B-203ENST00000508736 ROCK2O75116 1388 aaKnown RBP15.97■□□□□ 0.15
PRPF40B-203ENST00000508736 MLECQ14165 292 aa15.96■□□□□ 0.15
PRPF40B-203ENST00000508736 RGL3Q3MIN7 710 aa15.95■□□□□ 0.14
PRPF40B-203ENST00000508736 NEFLP07196 543 aa15.94■□□□□ 0.14
PRPF40B-203ENST00000508736 MADDQ8WXG6 1647 aa15.92■□□□□ 0.14
PRPF40B-203ENST00000508736 REREQ9P2R6 1566 aa15.91■□□□□ 0.14
PRPF40B-203ENST00000508736 SIGLEC1Q9BZZ2 1709 aa15.91■□□□□ 0.14
PRPF40B-203ENST00000508736 ABCC3O15438 1527 aa15.91■□□□□ 0.14
PRPF40B-203ENST00000508736 AGLP35573 1532 aa15.9■□□□□ 0.14
PRPF40B-203ENST00000508736 ZC3H13Q5T200 1668 aaKnown RBP15.9■□□□□ 0.14
PRPF40B-203ENST00000508736 NPATQ14207 1427 aa15.89■□□□□ 0.13
PRPF40B-203ENST00000508736 MYOM2P54296 1465 aa15.88■□□□□ 0.13
PRPF40B-203ENST00000508736 ARHGAP31Q2M1Z3 1444 aa15.88■□□□□ 0.13
PRPF40B-203ENST00000508736 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
PRPF40B-203ENST00000508736 KIF1BO60333 1816 aa15.88■□□□□ 0.13
PRPF40B-203ENST00000508736 KIAA1210Q9ULL0 1709 aa15.87■□□□□ 0.13
PRPF40B-203ENST00000508736 WASHC2CQ9Y4E1 1318 aa15.87■□□□□ 0.13
PRPF40B-203ENST00000508736 CAMSAP1Q5T5Y3 1602 aa15.87■□□□□ 0.13
PRPF40B-203ENST00000508736 NBPF1Q3BBV0 1214 aa15.86■□□□□ 0.13
PRPF40B-203ENST00000508736 PRKRIP1Q9H875 184 aaPredicted RBP15.86■□□□□ 0.13
PRPF40B-203ENST00000508736 HNRNPUQ00839 825 aaKnown RBP eCLIP15.85■□□□□ 0.13
PRPF40B-203ENST00000508736 FKBP8Q14318 412 aa15.85■□□□□ 0.13
PRPF40B-203ENST00000508736 ESF1Q9H501 851 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-203ENST00000508736 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
PRPF40B-203ENST00000508736 NOS1P29475 1434 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms