RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 EPAS1Q99814 870 aa12.43□□□□□ -0.42
UBE2D3-225ENST00000508476 ADGRD1Q6QNK2 874 aa12.42□□□□□ -0.42
UBE2D3-225ENST00000508476 P3H3Q8IVL6 736 aa12.42□□□□□ -0.42
UBE2D3-225ENST00000508476 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
UBE2D3-225ENST00000508476 COL9A1P20849 921 aa12.4□□□□□ -0.42
UBE2D3-225ENST00000508476 MLLT3P42568 568 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-225ENST00000508476 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
UBE2D3-225ENST00000508476 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-225ENST00000508476 C6orf132Q5T0Z8 1188 aa12.38□□□□□ -0.43
UBE2D3-225ENST00000508476 OSBPP22059 807 aa12.37□□□□□ -0.43
UBE2D3-225ENST00000508476 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-225ENST00000508476 VPS9D1Q9Y2B5 631 aa12.37□□□□□ -0.43
UBE2D3-225ENST00000508476 TK2O00142 265 aa12.36□□□□□ -0.43
UBE2D3-225ENST00000508476 MAP3K7O43318 606 aa12.36□□□□□ -0.43
UBE2D3-225ENST00000508476 ZBED2Q9BTP6 218 aa12.36□□□□□ -0.43
UBE2D3-225ENST00000508476 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
UBE2D3-225ENST00000508476 SEMA3EO15041 775 aa12.35□□□□□ -0.43
UBE2D3-225ENST00000508476 HRO43593 1189 aa12.34□□□□□ -0.43
UBE2D3-225ENST00000508476 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
UBE2D3-225ENST00000508476 PROX2Q3B8N5 592 aa12.33□□□□□ -0.44
UBE2D3-225ENST00000508476 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
UBE2D3-225ENST00000508476 CDHR5Q9HBB8 845 aa12.31□□□□□ -0.44
UBE2D3-225ENST00000508476 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-225ENST00000508476 BHMG1C9JSJ3 638 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-225ENST00000508476 TESPA1A2RU30 521 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-225ENST00000508476 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
UBE2D3-225ENST00000508476 TRIM6-TRIM34B2RNG4 842 aa12.21□□□□□ -0.45
UBE2D3-225ENST00000508476 NPDC1Q9NQX5 325 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-225ENST00000508476 RABGEF1Q9UJ41 708 aa12.21□□□□□ -0.45
UBE2D3-225ENST00000508476 TSKSQ9UJT2 592 aa12.21□□□□□ -0.45
UBE2D3-225ENST00000508476 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
UBE2D3-225ENST00000508476 FAM198AQ9UFP1 575 aa12.2□□□□□ -0.46
UBE2D3-225ENST00000508476 CDCA7LQ96GN5 454 aa12.19□□□□□ -0.46
UBE2D3-225ENST00000508476 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-225ENST00000508476 PRSS12P56730 875 aa12.17□□□□□ -0.46
UBE2D3-225ENST00000508476 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-225ENST00000508476 KCTD12Q96CX2 325 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-225ENST00000508476 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
UBE2D3-225ENST00000508476 SEPT9Q9UHD8 586 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-225ENST00000508476 C3orf80F5H4A9 247 aa12.16□□□□□ -0.46
UBE2D3-225ENST00000508476 NUTM2FA1L443 756 aa12.15□□□□□ -0.46
UBE2D3-225ENST00000508476 CERKQ8TCT0 537 aa12.15□□□□□ -0.46
UBE2D3-225ENST00000508476 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-225ENST00000508476 SMAPO00193 183 aa12.12□□□□□ -0.47
UBE2D3-225ENST00000508476 PTGDRQ13258 359 aa12.12□□□□□ -0.47
UBE2D3-225ENST00000508476 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
UBE2D3-225ENST00000508476 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
UBE2D3-225ENST00000508476 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
UBE2D3-225ENST00000508476 WNT2BQ93097 391 aa12.1□□□□□ -0.47
UBE2D3-225ENST00000508476 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
UBE2D3-225ENST00000508476 TTC13Q8NBP0 860 aa12.09□□□□□ -0.47
UBE2D3-225ENST00000508476 LAPTM4BQ86VI4 370 aa12.07□□□□□ -0.48
UBE2D3-225ENST00000508476 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-225ENST00000508476 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-225ENST00000508476 PTPN5P54829 565 aa12.06□□□□□ -0.48
UBE2D3-225ENST00000508476 FAM98CQ17RN3 349 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-225ENST00000508476 THSD4Q6ZMP0 1018 aa12.06□□□□□ -0.48
UBE2D3-225ENST00000508476 NUDT18Q6ZVK8 323 aa12.06□□□□□ -0.48
UBE2D3-225ENST00000508476 TATDN2Q93075 761 aa12.06□□□□□ -0.48
UBE2D3-225ENST00000508476 PNMA3Q9UL41 463 aa12.06□□□□□ -0.48
UBE2D3-225ENST00000508476 GPR37O15354 613 aa12.04□□□□□ -0.48
UBE2D3-225ENST00000508476 BCAMP50895 628 aa12.04□□□□□ -0.48
UBE2D3-225ENST00000508476 NBPF26B4DH59 902 aa12.03□□□□□ -0.48
UBE2D3-225ENST00000508476 FCHSD2O94868 740 aa12.03□□□□□ -0.48
UBE2D3-225ENST00000508476 ANKK1Q8NFD2 765 aa12.03□□□□□ -0.48
UBE2D3-225ENST00000508476 HCSTQ9UBK5 93 aa12.03□□□□□ -0.48
UBE2D3-225ENST00000508476 FAM161AQ3B820 660 aa12.02□□□□□ -0.49
UBE2D3-225ENST00000508476 FECHP22830 423 aa12□□□□□ -0.49
UBE2D3-225ENST00000508476 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
UBE2D3-225ENST00000508476 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
UBE2D3-225ENST00000508476 GPIHBP1Q8IV16 184 aa11.98□□□□□ -0.49
UBE2D3-225ENST00000508476 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
UBE2D3-225ENST00000508476 EYA1Q99502 592 aa11.97□□□□□ -0.49
UBE2D3-225ENST00000508476 ADGRG1Q9Y653 693 aa11.97□□□□□ -0.49
UBE2D3-225ENST00000508476 HIC1Q14526 733 aa11.96□□□□□ -0.49
UBE2D3-225ENST00000508476 LRCH3Q96II8 777 aa11.95□□□□□ -0.5
UBE2D3-225ENST00000508476 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.95□□□□□ -0.5
UBE2D3-225ENST00000508476 GNPATO15228 680 aa11.94□□□□□ -0.5
UBE2D3-225ENST00000508476 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBE2D3-225ENST00000508476 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
UBE2D3-225ENST00000508476 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
UBE2D3-225ENST00000508476 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
UBE2D3-225ENST00000508476 SWT1Q5T5J6 900 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-225ENST00000508476 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
UBE2D3-225ENST00000508476 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-225ENST00000508476 RNF40O75150 1001 aa11.88□□□□□ -0.51
UBE2D3-225ENST00000508476 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-225ENST00000508476 RCCD1A6NED2 376 aa11.87□□□□□ -0.51
UBE2D3-225ENST00000508476 PXYLP1Q8TE99 480 aa11.86□□□□□ -0.51
UBE2D3-225ENST00000508476 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
UBE2D3-225ENST00000508476 DNAJB2P25686 324 aa11.85□□□□□ -0.51
UBE2D3-225ENST00000508476 METTL3Q86U44 580 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-225ENST00000508476 PPP4CP60510 307 aa11.84□□□□□ -0.51
UBE2D3-225ENST00000508476 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
UBE2D3-225ENST00000508476 TMEM134Q9H6X4 195 aa11.84□□□□□ -0.51
UBE2D3-225ENST00000508476 OATP04181 439 aa11.83□□□□□ -0.52
UBE2D3-225ENST00000508476 HDGFP51858 240 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-225ENST00000508476 PHOX2BQ99453 314 aa11.82□□□□□ -0.52
UBE2D3-225ENST00000508476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-225ENST00000508476 SLF2Q8IX21 1173 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms