RNA–Protein interactions for RNA: ENST00000507879.5

TNIP3-203, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP3, Length 1,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-203ENST00000507879 BECN1Q14457 450 aa12.81□□□□□ -0.36
TNIP3-203ENST00000507879 MYBBP1AQ9BQG0 1328 aaKnown RBP12.81□□□□□ -0.36
TNIP3-203ENST00000507879 MRE11P49959 708 aa12.81□□□□□ -0.36
TNIP3-203ENST00000507879 FGD1P98174 961 aa12.81□□□□□ -0.36
TNIP3-203ENST00000507879 CADPSQ9ULU8 1353 aa12.8□□□□□ -0.36
TNIP3-203ENST00000507879 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
TNIP3-203ENST00000507879 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
TNIP3-203ENST00000507879 BLMP54132 1417 aaPredicted RBP12.8□□□□□ -0.36
TNIP3-203ENST00000507879 CARMIL1Q5VZK9 1371 aa12.8□□□□□ -0.36
TNIP3-203ENST00000507879 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
TNIP3-203ENST00000507879 LRRIQ1Q96JM4 1722 aa12.78□□□□□ -0.36
TNIP3-203ENST00000507879 ESPNB1AK53 854 aa12.78□□□□□ -0.36
TNIP3-203ENST00000507879 ANTXR1Q9H6X2 564 aa12.78□□□□□ -0.36
TNIP3-203ENST00000507879 GAPVD1Q14C86 1478 aa12.77□□□□□ -0.36
TNIP3-203ENST00000507879 NBPF8Q3BBV2 869 aa12.77□□□□□ -0.36
TNIP3-203ENST00000507879 SMAP1Q8IYB5 467 aaPredicted RBP12.76□□□□□ -0.37
TNIP3-203ENST00000507879 CRBNQ96SW2 442 aa12.76□□□□□ -0.37
TNIP3-203ENST00000507879 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
TNIP3-203ENST00000507879 NLRP1Q9C000 1473 aa12.75□□□□□ -0.37
TNIP3-203ENST00000507879 USP19O94966 1318 aa12.75□□□□□ -0.37
TNIP3-203ENST00000507879 MTERF4Q7Z6M4 381 aaKnown RBP12.75□□□□□ -0.37
TNIP3-203ENST00000507879 KDM6BO15054 1643 aa12.75□□□□□ -0.37
TNIP3-203ENST00000507879 UHRF1BP1Q6BDS2 1440 aa12.74□□□□□ -0.37
TNIP3-203ENST00000507879 MPHOSPH9Q99550 1183 aa12.74□□□□□ -0.37
TNIP3-203ENST00000507879 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
TNIP3-203ENST00000507879 MTUS2Q5JR59 1369 aa12.74□□□□□ -0.37
TNIP3-203ENST00000507879 SAMD9Q5K651 1589 aa12.73□□□□□ -0.37
TNIP3-203ENST00000507879 RALGAPBQ86X10 1494 aa12.73□□□□□ -0.37
TNIP3-203ENST00000507879 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
TNIP3-203ENST00000507879 USP47Q96K76 1375 aa12.73□□□□□ -0.37
TNIP3-203ENST00000507879 CLASP1Q7Z460 1538 aa12.73□□□□□ -0.37
TNIP3-203ENST00000507879 CFTRP13569 1480 aa12.72□□□□□ -0.37
TNIP3-203ENST00000507879 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
TNIP3-203ENST00000507879 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
TNIP3-203ENST00000507879 CUL7Q14999 1698 aa12.72□□□□□ -0.37
TNIP3-203ENST00000507879 UTP14CQ5TAP6 766 aaKnown RBP12.71□□□□□ -0.37
TNIP3-203ENST00000507879 MYH16Q9H6N6 1097 aa12.71□□□□□ -0.37
TNIP3-203ENST00000507879 NLRP13Q86W25 1043 aa12.71□□□□□ -0.38
TNIP3-203ENST00000507879 NCLP19338 710 aaKnown RBP12.7□□□□□ -0.38
TNIP3-203ENST00000507879 MCM4P33991 863 aa12.7□□□□□ -0.38
TNIP3-203ENST00000507879 ARHGEF12Q9NZN5 1544 aa12.69□□□□□ -0.38
TNIP3-203ENST00000507879 MAPK8IP3Q9UPT6 1336 aa12.68□□□□□ -0.38
TNIP3-203ENST00000507879 OFD1O75665 1012 aa12.68□□□□□ -0.38
TNIP3-203ENST00000507879 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
TNIP3-203ENST00000507879 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
TNIP3-203ENST00000507879 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.67□□□□□ -0.38
TNIP3-203ENST00000507879 LMTK3Q96Q04 1460 aa12.67□□□□□ -0.38
TNIP3-203ENST00000507879 FANCD2Q9BXW9 1451 aa12.67□□□□□ -0.38
TNIP3-203ENST00000507879 PTMSP20962 102 aa12.66□□□□□ -0.38
TNIP3-203ENST00000507879 PDE4CQ08493 712 aa12.66□□□□□ -0.38
TNIP3-203ENST00000507879 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
TNIP3-203ENST00000507879 ERBB4Q15303 1308 aa12.66□□□□□ -0.38
TNIP3-203ENST00000507879 CHD1O14646 1710 aa12.66□□□□□ -0.38
TNIP3-203ENST00000507879 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
TNIP3-203ENST00000507879 ERCC6L2Q5T890 1561 aa12.66□□□□□ -0.38
TNIP3-203ENST00000507879 KDM4FA0A1W2PPD8 638 aa12.66□□□□□ -0.38
TNIP3-203ENST00000507879 DDX11L8A8MPP1 907 aa12.66□□□□□ -0.38
TNIP3-203ENST00000507879 FBXO41Q8TF61 875 aa12.65□□□□□ -0.38
TNIP3-203ENST00000507879 KIAA1211Q6ZU35 1233 aa12.64□□□□□ -0.39
TNIP3-203ENST00000507879 TRIM44Q96DX7 344 aaPredicted RBP12.64□□□□□ -0.39
TNIP3-203ENST00000507879 PPP1R9BQ96SB3 815 aa12.64□□□□□ -0.39
TNIP3-203ENST00000507879 NINLQ9Y2I6 1382 aa12.64□□□□□ -0.39
TNIP3-203ENST00000507879 DNMT1P26358 1616 aaKnown RBP12.64□□□□□ -0.39
TNIP3-203ENST00000507879 URB2Q14146 1524 aaKnown RBP12.64□□□□□ -0.39
TNIP3-203ENST00000507879 HS1BP3Q53T59 392 aa12.64□□□□□ -0.39
TNIP3-203ENST00000507879 CHMP5Q9NZZ3 219 aa12.64□□□□□ -0.39
TNIP3-203ENST00000507879 TRAK2O60296 914 aa12.63□□□□□ -0.39
TNIP3-203ENST00000507879 RIPK4P57078 832 aa12.62□□□□□ -0.39
TNIP3-203ENST00000507879 CCDC173Q0VFZ6 552 aa12.62□□□□□ -0.39
TNIP3-203ENST00000507879 EPRSP07814 1512 aaKnown RBP12.62□□□□□ -0.39
TNIP3-203ENST00000507879 IBTKQ9P2D0 1353 aaPredicted RBP12.62□□□□□ -0.39
TNIP3-203ENST00000507879 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
TNIP3-203ENST00000507879 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
TNIP3-203ENST00000507879 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
TNIP3-203ENST00000507879 LAMC1P11047 1609 aa12.61□□□□□ -0.39
TNIP3-203ENST00000507879 SOCS7O14512 581 aa12.61□□□□□ -0.39
TNIP3-203ENST00000507879 RGS3P49796 1198 aa12.61□□□□□ -0.39
TNIP3-203ENST00000507879 NCOA3Q9Y6Q9 1424 aa12.6□□□□□ -0.39
TNIP3-203ENST00000507879 A0A0U1RQG5 324 aaPredicted RBP12.6□□□□□ -0.39
TNIP3-203ENST00000507879 PLIN1O60240 522 aa12.6□□□□□ -0.39
TNIP3-203ENST00000507879 CDCA7LQ96GN5 454 aa12.6□□□□□ -0.39
TNIP3-203ENST00000507879 PLXNC1O60486 1568 aa12.6□□□□□ -0.39
TNIP3-203ENST00000507879 PZPP20742 1482 aa12.59□□□□□ -0.39
TNIP3-203ENST00000507879 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
TNIP3-203ENST00000507879 SKOR2Q2VWA4 1001 aaPredicted RBP12.59□□□□□ -0.39
TNIP3-203ENST00000507879 DYNC1I1O14576 645 aa12.58□□□□□ -0.39
TNIP3-203ENST00000507879 DMTNQ08495 405 aa12.58□□□□□ -0.39
TNIP3-203ENST00000507879 UPF2Q9HAU5 1272 aaKnown RBP12.58□□□□□ -0.39
TNIP3-203ENST00000507879 ANKRD30AQ9BXX3 1397 aa12.58□□□□□ -0.4
TNIP3-203ENST00000507879 ARHGAP31Q2M1Z3 1444 aa12.58□□□□□ -0.4
TNIP3-203ENST00000507879 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
TNIP3-203ENST00000507879 ADGBQ8N7X0 1667 aa12.58□□□□□ -0.4
TNIP3-203ENST00000507879 CAMSAP2Q08AD1 1489 aa12.57□□□□□ -0.4
TNIP3-203ENST00000507879 ZNF521Q96K83 1311 aa12.57□□□□□ -0.4
TNIP3-203ENST00000507879 KIAA1107Q9UPP5 1409 aa12.57□□□□□ -0.4
TNIP3-203ENST00000507879 C20orf194Q5TEA3 1177 aa12.57□□□□□ -0.4
TNIP3-203ENST00000507879 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
TNIP3-203ENST00000507879 RRP7BPQ9NSQ0 103 aa12.57□□□□□ -0.4
TNIP3-203ENST00000507879 MAGI3Q5TCQ9 1506 aa12.57□□□□□ -0.4
TNIP3-203ENST00000507879 ZNF500O60304 480 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms