RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 BOLA1Q9Y3E2 137 aa10.2□□□□□ -0.78
VEGFC-201ENST00000507638 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
VEGFC-201ENST00000507638 MADDQ8WXG6 1647 aa10.18□□□□□ -0.78
VEGFC-201ENST00000507638 MED1Q15648 1581 aaPredicted RBP10.18□□□□□ -0.78
VEGFC-201ENST00000507638 ABCC2Q92887 1545 aa10.17□□□□□ -0.78
VEGFC-201ENST00000507638 UBAP1LF5GYI3 381 aa10.17□□□□□ -0.78
VEGFC-201ENST00000507638 C3orf67Q6ZVT6 689 aa10.17□□□□□ -0.78
VEGFC-201ENST00000507638 PTPRGP23470 1445 aa10.16□□□□□ -0.78
VEGFC-201ENST00000507638 CUL7Q14999 1698 aa10.16□□□□□ -0.78
VEGFC-201ENST00000507638 TMEM121BQ9BXQ6 578 aaPredicted RBP10.16□□□□□ -0.78
VEGFC-201ENST00000507638 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.16□□□□□ -0.78
VEGFC-201ENST00000507638 BCORL1Q5H9F3 1711 aa10.16□□□□□ -0.78
VEGFC-201ENST00000507638 MS4A4AQ96JQ5 239 aa10.15□□□□□ -0.78
VEGFC-201ENST00000507638 KIAA0586Q9BVV6 1533 aa10.15□□□□□ -0.78
VEGFC-201ENST00000507638 RIMS1Q86UR5 1692 aaKnown RBP10.15□□□□□ -0.79
VEGFC-201ENST00000507638 YEATS2Q9ULM3 1422 aa10.15□□□□□ -0.79
VEGFC-201ENST00000507638 NKX1-1Q15270 411 aaPredicted RBP10.14□□□□□ -0.79
VEGFC-201ENST00000507638 SPRYD3Q8NCJ5 442 aa10.13□□□□□ -0.79
VEGFC-201ENST00000507638 STRCQ7RTU9 1775 aa10.13□□□□□ -0.79
VEGFC-201ENST00000507638 POTEB2H3BUK9 544 aa10.12□□□□□ -0.79
VEGFC-201ENST00000507638 GTPBP6O43824 516 aaPredicted RBP10.11□□□□□ -0.79
VEGFC-201ENST00000507638 HSPA1LP34931 641 aa10.11□□□□□ -0.79
VEGFC-201ENST00000507638 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
VEGFC-201ENST00000507638 IQSEC2Q5JU85 1478 aa10.1□□□□□ -0.79
VEGFC-201ENST00000507638 DPY19L2Q6NUT2 758 aa10.1□□□□□ -0.79
VEGFC-201ENST00000507638 RUSC2Q8N2Y8 1516 aa10.1□□□□□ -0.79
VEGFC-201ENST00000507638 LTBP4Q8N2S1 1624 aa10.1□□□□□ -0.79
VEGFC-201ENST00000507638 CD109Q6YHK3 1445 aa10.09□□□□□ -0.79
VEGFC-201ENST00000507638 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
VEGFC-201ENST00000507638 MAGI3Q5TCQ9 1506 aa10.07□□□□□ -0.8
VEGFC-201ENST00000507638 POTEJP0CG39 1038 aa10.06□□□□□ -0.8
VEGFC-201ENST00000507638 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
VEGFC-201ENST00000507638 RAPGEF3O95398 923 aa10.05□□□□□ -0.8
VEGFC-201ENST00000507638 PTPRTO14522 1441 aa10.05□□□□□ -0.8
VEGFC-201ENST00000507638 SNPHO15079 494 aa10.04□□□□□ -0.8
VEGFC-201ENST00000507638 UHRF1BP1LA0JNW5 1464 aa10.04□□□□□ -0.8
VEGFC-201ENST00000507638 TNIKQ9UKE5 1360 aa10.03□□□□□ -0.8
VEGFC-201ENST00000507638 ERICH3Q5RHP9 1530 aa10.03□□□□□ -0.8
VEGFC-201ENST00000507638 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
VEGFC-201ENST00000507638 SLAIN1Q8ND83 568 aa10.03□□□□□ -0.8
VEGFC-201ENST00000507638 RGS17Q9UGC6 210 aaPredicted RBP10.03□□□□□ -0.8
VEGFC-201ENST00000507638 ARAP3Q8WWN8 1544 aa10.02□□□□□ -0.8
VEGFC-201ENST00000507638 UACAQ9BZF9 1416 aa10.02□□□□□ -0.81
VEGFC-201ENST00000507638 CFAP43Q8NDM7 1665 aa10.01□□□□□ -0.81
VEGFC-201ENST00000507638 KDM5BQ9UGL1 1544 aa10.01□□□□□ -0.81
VEGFC-201ENST00000507638 PPP1R37O75864 691 aa10□□□□□ -0.81
VEGFC-201ENST00000507638 CEBPAP49715 358 aaPredicted RBP10□□□□□ -0.81
VEGFC-201ENST00000507638 MLECQ14165 292 aa10□□□□□ -0.81
VEGFC-201ENST00000507638 PAXIP1Q6ZW49 1069 aaPredicted RBP10□□□□□ -0.81
VEGFC-201ENST00000507638 TMC2Q8TDI7 906 aa10□□□□□ -0.81
VEGFC-201ENST00000507638 ZCCHC11Q5TAX3 1644 aaKnown RBP9.99□□□□□ -0.81
VEGFC-201ENST00000507638 PREX1Q8TCU6 1659 aa9.99□□□□□ -0.81
VEGFC-201ENST00000507638 WRNQ14191 1432 aaPredicted RBP eCLIP9.99□□□□□ -0.81
VEGFC-201ENST00000507638 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
VEGFC-201ENST00000507638 WDR7Q9Y4E6 1490 aa9.98□□□□□ -0.81
VEGFC-201ENST00000507638 POTEMA6NI47 508 aa9.97□□□□□ -0.81
VEGFC-201ENST00000507638 SETD1BQ9UPS6 1966 aaKnown RBP9.96□□□□□ -0.81
VEGFC-201ENST00000507638 PDE4AP27815 886 aa9.96□□□□□ -0.82
VEGFC-201ENST00000507638 CARMIL2Q6F5E8 1435 aa9.96□□□□□ -0.82
VEGFC-201ENST00000507638 PLCB2Q00722 1185 aa9.95□□□□□ -0.82
VEGFC-201ENST00000507638 ZNF335Q9H4Z2 1342 aaPredicted RBP9.95□□□□□ -0.82
VEGFC-201ENST00000507638 POTEAQ6S8J7 498 aa9.94□□□□□ -0.82
VEGFC-201ENST00000507638 GPHNQ9NQX3 736 aaPredicted RBP9.94□□□□□ -0.82
VEGFC-201ENST00000507638 POGZQ7Z3K3 1410 aa9.93□□□□□ -0.82
VEGFC-201ENST00000507638 KIF3CO14782 793 aa9.93□□□□□ -0.82
VEGFC-201ENST00000507638 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
VEGFC-201ENST00000507638 TOM1O60784 492 aa9.93□□□□□ -0.82
VEGFC-201ENST00000507638 DOK7Q18PE1 504 aa9.92□□□□□ -0.82
VEGFC-201ENST00000507638 UHRF1BP1Q6BDS2 1440 aa9.91□□□□□ -0.82
VEGFC-201ENST00000507638 POTEGQ6S5H5 508 aa9.91□□□□□ -0.82
VEGFC-201ENST00000507638 FER1L4A9Z1Z3 1794 aa9.91□□□□□ -0.82
VEGFC-201ENST00000507638 PHLDB1Q86UU1 1377 aa9.9□□□□□ -0.82
VEGFC-201ENST00000507638 FOXK1P85037 733 aa9.9□□□□□ -0.82
VEGFC-201ENST00000507638 CRISPLD2Q9H0B8 497 aa9.9□□□□□ -0.82
VEGFC-201ENST00000507638 ZSWIM6Q9HCJ5 1215 aa9.9□□□□□ -0.82
VEGFC-201ENST00000507638 C2orf72A6NCS6 295 aa9.89□□□□□ -0.83
VEGFC-201ENST00000507638 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.83
VEGFC-201ENST00000507638 TTC37Q6PGP7 1564 aa9.88□□□□□ -0.83
VEGFC-201ENST00000507638 TMEM92Q6UXU6 159 aa9.87□□□□□ -0.83
VEGFC-201ENST00000507638 FANCAO15360 1455 aa9.86□□□□□ -0.83
VEGFC-201ENST00000507638 SLC34A2O95436 690 aa9.86□□□□□ -0.83
VEGFC-201ENST00000507638 SRCAPQ6ZRS2 3230 aa9.86□□□□□ -0.83
VEGFC-201ENST00000507638 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
VEGFC-201ENST00000507638 MFSD10Q14728 455 aa9.85□□□□□ -0.83
VEGFC-201ENST00000507638 IFFO2Q5TF58 517 aa9.85□□□□□ -0.83
VEGFC-201ENST00000507638 ZNF710Q8N1W2 664 aa9.85□□□□□ -0.83
VEGFC-201ENST00000507638 DDX27Q96GQ7 796 aaKnown RBP9.85□□□□□ -0.83
VEGFC-201ENST00000507638 SIGLEC1Q9BZZ2 1709 aa9.85□□□□□ -0.83
VEGFC-201ENST00000507638 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
VEGFC-201ENST00000507638 FRMPD1Q5SYB0 1578 aa9.84□□□□□ -0.83
VEGFC-201ENST00000507638 NCOA1Q15788 1441 aa9.82□□□□□ -0.84
VEGFC-201ENST00000507638 PPP1R15BQ5SWA1 713 aa9.82□□□□□ -0.84
VEGFC-201ENST00000507638 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
VEGFC-201ENST00000507638 WDR70Q9NW82 654 aa9.82□□□□□ -0.84
VEGFC-201ENST00000507638 ARHGEF40Q8TER5 1519 aa9.82□□□□□ -0.84
VEGFC-201ENST00000507638 AKNAQ7Z591 1439 aa9.82□□□□□ -0.84
VEGFC-201ENST00000507638 TBC1D12O60347 775 aa9.81□□□□□ -0.84
VEGFC-201ENST00000507638 PLPP6Q8IY26 295 aa9.81□□□□□ -0.84
VEGFC-201ENST00000507638 PCDH10Q9P2E7 1040 aa9.81□□□□□ -0.84
VEGFC-201ENST00000507638 DISP1Q96F81 1524 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms