RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 E2F4Q16254 413 aa13.63□□□□□ -0.23
LINC01088-203ENST00000507476 EPAS1Q99814 870 aa13.63□□□□□ -0.23
LINC01088-203ENST00000507476 DDX12PQ92771 950 aa13.62□□□□□ -0.23
LINC01088-203ENST00000507476 PROX2Q3B8N5 592 aa13.6□□□□□ -0.23
LINC01088-203ENST00000507476 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
LINC01088-203ENST00000507476 WDR70Q9NW82 654 aa13.58□□□□□ -0.24
LINC01088-203ENST00000507476 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-203ENST00000507476 MRPL50Q8N5N7 158 aaKnown RBP13.57□□□□□ -0.24
LINC01088-203ENST00000507476 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
LINC01088-203ENST00000507476 ARIH1Q9Y4X5 557 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-203ENST00000507476 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
LINC01088-203ENST00000507476 RABGEF1Q9UJ41 708 aa13.55□□□□□ -0.24
LINC01088-203ENST00000507476 NBR1Q14596 966 aa13.54□□□□□ -0.24
LINC01088-203ENST00000507476 THSD4Q6ZMP0 1018 aa13.53□□□□□ -0.24
LINC01088-203ENST00000507476 PLA2G2EQ9NZK7 142 aa13.53□□□□□ -0.24
LINC01088-203ENST00000507476 PTPN5P54829 565 aa13.52□□□□□ -0.25
LINC01088-203ENST00000507476 TSHZ2Q9NRE2 1034 aa13.52□□□□□ -0.25
LINC01088-203ENST00000507476 GOLGA8CPA6NN73 597 aa13.51□□□□□ -0.25
LINC01088-203ENST00000507476 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
LINC01088-203ENST00000507476 WNT2BQ93097 391 aa13.51□□□□□ -0.25
LINC01088-203ENST00000507476 PRIM1P49642 420 aaKnown RBP13.49□□□□□ -0.25
LINC01088-203ENST00000507476 TSR1Q2NL82 804 aaKnown RBP13.49□□□□□ -0.25
LINC01088-203ENST00000507476 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
LINC01088-203ENST00000507476 MAP3K7O43318 606 aa13.47□□□□□ -0.25
LINC01088-203ENST00000507476 ONECUT3O60422 494 aaPredicted RBP13.47□□□□□ -0.25
LINC01088-203ENST00000507476 TRIM6-TRIM34B2RNG4 842 aa13.46□□□□□ -0.25
LINC01088-203ENST00000507476 GRXCR2A6NFK2 248 aa13.45□□□□□ -0.26
LINC01088-203ENST00000507476 LAPTM4BQ86VI4 370 aa13.43□□□□□ -0.26
LINC01088-203ENST00000507476 SEPT9Q9UHD8 586 aaPredicted RBP13.42□□□□□ -0.26
LINC01088-203ENST00000507476 OSBPP22059 807 aa13.4□□□□□ -0.26
LINC01088-203ENST00000507476 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
LINC01088-203ENST00000507476 TSKSQ9UJT2 592 aa13.4□□□□□ -0.26
LINC01088-203ENST00000507476 ZFRQ96KR1 1074 aaKnown RBP13.39□□□□□ -0.27
LINC01088-203ENST00000507476 BCAMP50895 628 aa13.38□□□□□ -0.27
LINC01088-203ENST00000507476 SOWAHBA6NEL2 793 aa13.35□□□□□ -0.27
LINC01088-203ENST00000507476 FAM98CQ17RN3 349 aaKnown RBP13.35□□□□□ -0.27
LINC01088-203ENST00000507476 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
LINC01088-203ENST00000507476 CDHR5Q9HBB8 845 aa13.35□□□□□ -0.27
LINC01088-203ENST00000507476 FAM198AQ9UFP1 575 aa13.35□□□□□ -0.27
LINC01088-203ENST00000507476 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
LINC01088-203ENST00000507476 PRSS12P56730 875 aa13.33□□□□□ -0.28
LINC01088-203ENST00000507476 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
LINC01088-203ENST00000507476 ARHGEF1Q92888 912 aaKnown RBP13.32□□□□□ -0.28
LINC01088-203ENST00000507476 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
LINC01088-203ENST00000507476 C3orf80F5H4A9 247 aa13.3□□□□□ -0.28
LINC01088-203ENST00000507476 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
LINC01088-203ENST00000507476 SMAPO00193 183 aa13.28□□□□□ -0.28
LINC01088-203ENST00000507476 WBP1LQ9NX94 342 aa13.28□□□□□ -0.28
LINC01088-203ENST00000507476 MLLT3P42568 568 aaPredicted RBP13.27□□□□□ -0.29
LINC01088-203ENST00000507476 NPDC1Q9NQX5 325 aaPredicted RBP13.26□□□□□ -0.29
LINC01088-203ENST00000507476 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.26□□□□□ -0.29
LINC01088-203ENST00000507476 LRCH3Q96II8 777 aa13.24□□□□□ -0.29
LINC01088-203ENST00000507476 PLCB2Q00722 1185 aa13.23□□□□□ -0.29
LINC01088-203ENST00000507476 TATDN2Q93075 761 aa13.23□□□□□ -0.29
LINC01088-203ENST00000507476 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
LINC01088-203ENST00000507476 HPS5Q9UPZ3 1129 aa13.23□□□□□ -0.29
LINC01088-203ENST00000507476 PNMA3Q9UL41 463 aa13.22□□□□□ -0.29
LINC01088-203ENST00000507476 NBPF26B4DH59 902 aa13.21□□□□□ -0.29
LINC01088-203ENST00000507476 NYAP1Q6ZVC0 841 aa13.21□□□□□ -0.29
LINC01088-203ENST00000507476 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
LINC01088-203ENST00000507476 TSR3Q9UJK0 312 aaKnown RBP13.21□□□□□ -0.29
LINC01088-203ENST00000507476 ITGBL1O95965 494 aaPredicted RBP13.2□□□□□ -0.3
LINC01088-203ENST00000507476 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
LINC01088-203ENST00000507476 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
LINC01088-203ENST00000507476 A0A0G2JS52 829 aa13.18□□□□□ -0.3
LINC01088-203ENST00000507476 PADI6Q6TGC4 694 aa13.18□□□□□ -0.3
LINC01088-203ENST00000507476 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
LINC01088-203ENST00000507476 SEMA3EO15041 775 aa13.12□□□□□ -0.31
LINC01088-203ENST00000507476 PPP4CP60510 307 aa13.12□□□□□ -0.31
LINC01088-203ENST00000507476 PTGDRQ13258 359 aa13.1□□□□□ -0.31
LINC01088-203ENST00000507476 RGS20O76081 388 aa13.08□□□□□ -0.32
LINC01088-203ENST00000507476 KCNC4Q03721 635 aa13.08□□□□□ -0.32
LINC01088-203ENST00000507476 EYA1Q99502 592 aa13.08□□□□□ -0.32
LINC01088-203ENST00000507476 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
LINC01088-203ENST00000507476 NUTM2FA1L443 756 aa13.04□□□□□ -0.32
LINC01088-203ENST00000507476 RNF40O75150 1001 aa13.03□□□□□ -0.32
LINC01088-203ENST00000507476 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
LINC01088-203ENST00000507476 TJAP1Q5JTD0 557 aa13.03□□□□□ -0.32
LINC01088-203ENST00000507476 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
LINC01088-203ENST00000507476 TESPA1A2RU30 521 aaPredicted RBP13□□□□□ -0.33
LINC01088-203ENST00000507476 APLP1P51693 650 aa13□□□□□ -0.33
LINC01088-203ENST00000507476 MTRQ99707 1265 aa12.99□□□□□ -0.33
LINC01088-203ENST00000507476 ADGRG1Q9Y653 693 aa12.99□□□□□ -0.33
LINC01088-203ENST00000507476 FCHSD2O94868 740 aa12.97□□□□□ -0.33
LINC01088-203ENST00000507476 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
LINC01088-203ENST00000507476 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
LINC01088-203ENST00000507476 KDM2AQ9Y2K7 1162 aa12.97□□□□□ -0.33
LINC01088-203ENST00000507476 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
LINC01088-203ENST00000507476 RBM46Q8TBY0 533 aaKnown RBP12.94□□□□□ -0.34
LINC01088-203ENST00000507476 IL21Q9HBE4 155 aa12.94□□□□□ -0.34
LINC01088-203ENST00000507476 DNAJB2P25686 324 aa12.93□□□□□ -0.34
LINC01088-203ENST00000507476 ZNF516Q92618 1163 aa12.93□□□□□ -0.34
LINC01088-203ENST00000507476 NECTIN2Q92692 538 aa12.92□□□□□ -0.34
LINC01088-203ENST00000507476 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
LINC01088-203ENST00000507476 RCCD1A6NED2 376 aa12.9□□□□□ -0.34
LINC01088-203ENST00000507476 GPR37O15354 613 aa12.88□□□□□ -0.35
LINC01088-203ENST00000507476 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
LINC01088-203ENST00000507476 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
LINC01088-203ENST00000507476 IRX2Q9BZI1 471 aaPredicted RBP12.88□□□□□ -0.35
LINC01088-203ENST00000507476 HIC1Q14526 733 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms