RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 ARHGEF1Q92888 912 aaKnown RBP9.37□□□□□ -0.91
CLDND1-212ENST00000506885 FOSBP53539 338 aa9.36□□□□□ -0.91
CLDND1-212ENST00000506885 PDIA6Q15084 440 aa9.36□□□□□ -0.91
CLDND1-212ENST00000506885 PHF14O94880 888 aa9.34□□□□□ -0.91
CLDND1-212ENST00000506885 FBXW7Q969H0 707 aa9.34□□□□□ -0.91
CLDND1-212ENST00000506885 EPAS1Q99814 870 aa9.34□□□□□ -0.91
CLDND1-212ENST00000506885 PSEN2P49810 448 aa9.33□□□□□ -0.92
CLDND1-212ENST00000506885 DMRTA1Q5VZB9 504 aa9.33□□□□□ -0.92
CLDND1-212ENST00000506885 Q6ZNB5 142 aa9.33□□□□□ -0.92
CLDND1-212ENST00000506885 ZDHHC16Q969W1 377 aa9.33□□□□□ -0.92
CLDND1-212ENST00000506885 TK2O00142 265 aa9.31□□□□□ -0.92
CLDND1-212ENST00000506885 TYW1BQ6NUM6 668 aa9.31□□□□□ -0.92
CLDND1-212ENST00000506885 HOMEZQ8IX15 550 aa9.31□□□□□ -0.92
CLDND1-212ENST00000506885 BCL2L12Q9HB09 334 aa9.31□□□□□ -0.92
CLDND1-212ENST00000506885 KCNV2Q8TDN2 545 aa9.3□□□□□ -0.92
CLDND1-212ENST00000506885 PTPREP23469 700 aa9.29□□□□□ -0.92
CLDND1-212ENST00000506885 KCTD12Q96CX2 325 aaKnown RBP9.29□□□□□ -0.92
CLDND1-212ENST00000506885 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
CLDND1-212ENST00000506885 PCDHGA10Q9Y5H3 936 aa9.29□□□□□ -0.92
CLDND1-212ENST00000506885 HRO43593 1189 aa9.28□□□□□ -0.92
CLDND1-212ENST00000506885 DDX12PQ92771 950 aa9.26□□□□□ -0.93
CLDND1-212ENST00000506885 KCNK17Q96T54 332 aa9.26□□□□□ -0.93
CLDND1-212ENST00000506885 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
CLDND1-212ENST00000506885 NBR1Q14596 966 aa9.23□□□□□ -0.93
CLDND1-212ENST00000506885 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
CLDND1-212ENST00000506885 GRXCR2A6NFK2 248 aa9.22□□□□□ -0.93
CLDND1-212ENST00000506885 IFFO2Q5TF58 517 aa9.22□□□□□ -0.93
CLDND1-212ENST00000506885 PPP1R3GB7ZBB8 358 aa9.21□□□□□ -0.94
CLDND1-212ENST00000506885 EN1Q05925 392 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-212ENST00000506885 PTPN5P54829 565 aa9.2□□□□□ -0.94
CLDND1-212ENST00000506885 TMEM132AQ24JP5 1023 aa9.2□□□□□ -0.94
CLDND1-212ENST00000506885 C6orf132Q5T0Z8 1188 aa9.2□□□□□ -0.94
CLDND1-212ENST00000506885 A0A0G2JS52 829 aa9.19□□□□□ -0.94
CLDND1-212ENST00000506885 MAP3K7O43318 606 aa9.19□□□□□ -0.94
CLDND1-212ENST00000506885 SMYD5Q6GMV2 418 aa9.19□□□□□ -0.94
CLDND1-212ENST00000506885 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
CLDND1-212ENST00000506885 RBM33Q96EV2 1170 aaKnown RBP9.18□□□□□ -0.94
CLDND1-212ENST00000506885 VPS9D1Q9Y2B5 631 aa9.18□□□□□ -0.94
CLDND1-212ENST00000506885 OSBPP22059 807 aa9.17□□□□□ -0.94
CLDND1-212ENST00000506885 ZBED2Q9BTP6 218 aa9.17□□□□□ -0.94
CLDND1-212ENST00000506885 ONECUT3O60422 494 aaPredicted RBP9.16□□□□□ -0.94
CLDND1-212ENST00000506885 SEMA3EO15041 775 aa9.13□□□□□ -0.95
CLDND1-212ENST00000506885 C14orf37Q86TY3 774 aa9.13□□□□□ -0.95
CLDND1-212ENST00000506885 NBPF3Q9H094 633 aa9.13□□□□□ -0.95
CLDND1-212ENST00000506885 COL9A1P20849 921 aa9.12□□□□□ -0.95
CLDND1-212ENST00000506885 MLLT3P42568 568 aaPredicted RBP9.12□□□□□ -0.95
CLDND1-212ENST00000506885 RABGEF1Q9UJ41 708 aa9.12□□□□□ -0.95
CLDND1-212ENST00000506885 TESPA1A2RU30 521 aaPredicted RBP9.11□□□□□ -0.95
CLDND1-212ENST00000506885 GOLGA8CPA6NN73 597 aa9.11□□□□□ -0.95
CLDND1-212ENST00000506885 TSR1Q2NL82 804 aaKnown RBP9.1□□□□□ -0.95
CLDND1-212ENST00000506885 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
CLDND1-212ENST00000506885 PACS2Q86VP3 889 aa9.09□□□□□ -0.95
CLDND1-212ENST00000506885 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
CLDND1-212ENST00000506885 RBM27Q9P2N5 1060 aaKnown RBP9.09□□□□□ -0.95
CLDND1-212ENST00000506885 TRIM6-TRIM34B2RNG4 842 aa9.08□□□□□ -0.96
CLDND1-212ENST00000506885 BHMG1C9JSJ3 638 aaPredicted RBP9.08□□□□□ -0.96
CLDND1-212ENST00000506885 LAPTM4AQ15012 233 aa9.08□□□□□ -0.96
CLDND1-212ENST00000506885 WNT2BQ93097 391 aa9.08□□□□□ -0.96
CLDND1-212ENST00000506885 PRSS12P56730 875 aa9.07□□□□□ -0.96
CLDND1-212ENST00000506885 LAPTM4BQ86VI4 370 aa9.07□□□□□ -0.96
CLDND1-212ENST00000506885 PRIM1P49642 420 aaKnown RBP9.06□□□□□ -0.96
CLDND1-212ENST00000506885 PROX2Q3B8N5 592 aa9.06□□□□□ -0.96
CLDND1-212ENST00000506885 CDCA7LQ96GN5 454 aa9.06□□□□□ -0.96
CLDND1-212ENST00000506885 KIAA1468Q9P260 1216 aa9.05□□□□□ -0.96
CLDND1-212ENST00000506885 NUTM2FA1L443 756 aa9.04□□□□□ -0.96
CLDND1-212ENST00000506885 TRAF7Q6Q0C0 670 aa9.03□□□□□ -0.96
CLDND1-212ENST00000506885 NBPF26B4DH59 902 aa9.02□□□□□ -0.97
CLDND1-212ENST00000506885 FCHSD2O94868 740 aa9.02□□□□□ -0.97
CLDND1-212ENST00000506885 RANGAP1P46060 587 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-212ENST00000506885 CDHR5Q9HBB8 845 aa9.02□□□□□ -0.97
CLDND1-212ENST00000506885 NPDC1Q9NQX5 325 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-212ENST00000506885 PTGDRQ13258 359 aa9.01□□□□□ -0.97
CLDND1-212ENST00000506885 FAM98CQ17RN3 349 aaKnown RBP9□□□□□ -0.97
CLDND1-212ENST00000506885 TSKSQ9UJT2 592 aa9□□□□□ -0.97
CLDND1-212ENST00000506885 ANKK1Q8NFD2 765 aa8.99□□□□□ -0.97
CLDND1-212ENST00000506885 HIC1Q14526 733 aa8.98□□□□□ -0.97
CLDND1-212ENST00000506885 RBM26Q5T8P6 1007 aaKnown RBP8.98□□□□□ -0.97
CLDND1-212ENST00000506885 TTC13Q8NBP0 860 aa8.98□□□□□ -0.97
CLDND1-212ENST00000506885 HDGFP51858 240 aaKnown RBP8.97□□□□□ -0.97
CLDND1-212ENST00000506885 TATDN2Q93075 761 aa8.97□□□□□ -0.97
CLDND1-212ENST00000506885 PADI6Q6TGC4 694 aa8.96□□□□□ -0.98
CLDND1-212ENST00000506885 ZFRQ96KR1 1074 aaKnown RBP8.96□□□□□ -0.98
CLDND1-212ENST00000506885 PNMA3Q9UL41 463 aa8.96□□□□□ -0.98
CLDND1-212ENST00000506885 GPIHBP1Q8IV16 184 aa8.95□□□□□ -0.98
CLDND1-212ENST00000506885 PODXL2Q9NZ53 605 aa8.95□□□□□ -0.98
CLDND1-212ENST00000506885 SEPT9Q9UHD8 586 aaPredicted RBP8.95□□□□□ -0.98
CLDND1-212ENST00000506885 NUDT18Q6ZVK8 323 aa8.94□□□□□ -0.98
CLDND1-212ENST00000506885 GNPATO15228 680 aa8.93□□□□□ -0.98
CLDND1-212ENST00000506885 RBM46Q8TBY0 533 aaKnown RBP8.93□□□□□ -0.98
CLDND1-212ENST00000506885 FAM198AQ9UFP1 575 aa8.93□□□□□ -0.98
CLDND1-212ENST00000506885 SOWAHBA6NEL2 793 aa8.92□□□□□ -0.98
CLDND1-212ENST00000506885 SLC4A3P48751 1232 aa8.92□□□□□ -0.98
CLDND1-212ENST00000506885 BCAMP50895 628 aa8.92□□□□□ -0.98
CLDND1-212ENST00000506885 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
CLDND1-212ENST00000506885 NECTIN2Q92692 538 aa8.92□□□□□ -0.98
CLDND1-212ENST00000506885 LRCH3Q96II8 777 aa8.92□□□□□ -0.98
CLDND1-212ENST00000506885 OATP04181 439 aa8.91□□□□□ -0.98
CLDND1-212ENST00000506885 ZNF787Q6DD87 383 aa8.91□□□□□ -0.98
CLDND1-212ENST00000506885 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-212ENST00000506885 ITGBL1O95965 494 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms