RNA–Protein interactions for RNA: ENST00000506552.1

PACRGL-213, Transcript of parkin coregulated like, humanhuman

TSL 3

Gene PACRGL, Length 414 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-213ENST00000506552 E2F4Q16254 413 aa10.4□□□□□ -0.74
PACRGL-213ENST00000506552 WNT2BQ93097 391 aa10.4□□□□□ -0.74
PACRGL-213ENST00000506552 PCDHGA10Q9Y5H3 936 aa10.4□□□□□ -0.74
PACRGL-213ENST00000506552 PPP1R3GB7ZBB8 358 aa10.39□□□□□ -0.75
PACRGL-213ENST00000506552 PHF14O94880 888 aa10.39□□□□□ -0.75
PACRGL-213ENST00000506552 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
PACRGL-213ENST00000506552 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
PACRGL-213ENST00000506552 TSHZ2Q9NRE2 1034 aa10.37□□□□□ -0.75
PACRGL-213ENST00000506552 TYW1BQ6NUM6 668 aa10.36□□□□□ -0.75
PACRGL-213ENST00000506552 RABGEF1Q9UJ41 708 aa10.35□□□□□ -0.75
PACRGL-213ENST00000506552 RGS20O76081 388 aa10.34□□□□□ -0.75
PACRGL-213ENST00000506552 DDX12PQ92771 950 aa10.34□□□□□ -0.75
PACRGL-213ENST00000506552 EPAS1Q99814 870 aa10.34□□□□□ -0.75
PACRGL-213ENST00000506552 SPDYE16A6NNV3 312 aaPredicted RBP10.33□□□□□ -0.76
PACRGL-213ENST00000506552 PDIA6Q15084 440 aa10.32□□□□□ -0.76
PACRGL-213ENST00000506552 ANKK1Q8NFD2 765 aa10.31□□□□□ -0.76
PACRGL-213ENST00000506552 LAPTM4BQ86VI4 370 aa10.3□□□□□ -0.76
PACRGL-213ENST00000506552 ARIH1Q9Y4X5 557 aaPredicted RBP10.3□□□□□ -0.76
PACRGL-213ENST00000506552 COL9A1P20849 921 aa10.29□□□□□ -0.76
PACRGL-213ENST00000506552 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
PACRGL-213ENST00000506552 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
PACRGL-213ENST00000506552 ONECUT3O60422 494 aaPredicted RBP10.28□□□□□ -0.76
PACRGL-213ENST00000506552 C6orf132Q5T0Z8 1188 aa10.28□□□□□ -0.76
PACRGL-213ENST00000506552 A0A0G2JS52 829 aa10.27□□□□□ -0.77
PACRGL-213ENST00000506552 NBR1Q14596 966 aa10.27□□□□□ -0.77
PACRGL-213ENST00000506552 GRXCR2A6NFK2 248 aa10.24□□□□□ -0.77
PACRGL-213ENST00000506552 NYAP1Q6ZVC0 841 aa10.24□□□□□ -0.77
PACRGL-213ENST00000506552 SOWAHBA6NEL2 793 aa10.23□□□□□ -0.77
PACRGL-213ENST00000506552 EN1Q05925 392 aaPredicted RBP10.23□□□□□ -0.77
PACRGL-213ENST00000506552 KIAA1468Q9P260 1216 aa10.23□□□□□ -0.77
PACRGL-213ENST00000506552 MAP3K7O43318 606 aa10.22□□□□□ -0.77
PACRGL-213ENST00000506552 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
PACRGL-213ENST00000506552 PLCB2Q00722 1185 aa10.22□□□□□ -0.77
PACRGL-213ENST00000506552 ZFRQ96KR1 1074 aaKnown RBP10.21□□□□□ -0.77
PACRGL-213ENST00000506552 TRIM6-TRIM34B2RNG4 842 aa10.2□□□□□ -0.78
PACRGL-213ENST00000506552 BCAMP50895 628 aa10.2□□□□□ -0.78
PACRGL-213ENST00000506552 TSR1Q2NL82 804 aaKnown RBP10.19□□□□□ -0.78
PACRGL-213ENST00000506552 ARHGEF1Q92888 912 aaKnown RBP10.19□□□□□ -0.78
PACRGL-213ENST00000506552 IRX2Q9BZI1 471 aaPredicted RBP10.18□□□□□ -0.78
PACRGL-213ENST00000506552 FAM98CQ17RN3 349 aaKnown RBP10.17□□□□□ -0.78
PACRGL-213ENST00000506552 KCNV2Q8TDN2 545 aa10.17□□□□□ -0.78
PACRGL-213ENST00000506552 OSBPP22059 807 aa10.16□□□□□ -0.78
PACRGL-213ENST00000506552 PRIM1P49642 420 aaKnown RBP10.16□□□□□ -0.78
PACRGL-213ENST00000506552 SEPT9Q9UHD8 586 aaPredicted RBP10.16□□□□□ -0.78
PACRGL-213ENST00000506552 LRCH3Q96II8 777 aa10.14□□□□□ -0.79
PACRGL-213ENST00000506552 WBP1LQ9NX94 342 aa10.14□□□□□ -0.79
PACRGL-213ENST00000506552 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
PACRGL-213ENST00000506552 CERKQ8TCT0 537 aa10.13□□□□□ -0.79
PACRGL-213ENST00000506552 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.13□□□□□ -0.79
PACRGL-213ENST00000506552 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
PACRGL-213ENST00000506552 P3H3Q8IVL6 736 aa10.12□□□□□ -0.79
PACRGL-213ENST00000506552 KCNC4Q03721 635 aa10.11□□□□□ -0.79
PACRGL-213ENST00000506552 CDCA7LQ96GN5 454 aa10.11□□□□□ -0.79
PACRGL-213ENST00000506552 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
PACRGL-213ENST00000506552 HAP1P54257 671 aaPredicted RBP10.1□□□□□ -0.79
PACRGL-213ENST00000506552 PRSS12P56730 875 aa10.1□□□□□ -0.79
PACRGL-213ENST00000506552 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
PACRGL-213ENST00000506552 CDHR5Q9HBB8 845 aa10.09□□□□□ -0.79
PACRGL-213ENST00000506552 MLLT3P42568 568 aaPredicted RBP10.08□□□□□ -0.8
PACRGL-213ENST00000506552 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
PACRGL-213ENST00000506552 SMAPO00193 183 aa10.03□□□□□ -0.8
PACRGL-213ENST00000506552 PPP4CP60510 307 aa10.03□□□□□ -0.8
PACRGL-213ENST00000506552 TATDN2Q93075 761 aa10.03□□□□□ -0.8
PACRGL-213ENST00000506552 NPDC1Q9NQX5 325 aaPredicted RBP10.03□□□□□ -0.8
PACRGL-213ENST00000506552 PNMA3Q9UL41 463 aa10.03□□□□□ -0.8
PACRGL-213ENST00000506552 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
PACRGL-213ENST00000506552 SEMA3EO15041 775 aa10.01□□□□□ -0.81
PACRGL-213ENST00000506552 RBM27Q9P2N5 1060 aaKnown RBP10.01□□□□□ -0.81
PACRGL-213ENST00000506552 C3orf80F5H4A9 247 aa9.99□□□□□ -0.81
PACRGL-213ENST00000506552 PADI6Q6TGC4 694 aa9.99□□□□□ -0.81
PACRGL-213ENST00000506552 NUDT18Q6ZVK8 323 aa9.99□□□□□ -0.81
PACRGL-213ENST00000506552 SAMD7Q7Z3H4 446 aa9.99□□□□□ -0.81
PACRGL-213ENST00000506552 NUTM2FA1L443 756 aa9.97□□□□□ -0.81
PACRGL-213ENST00000506552 KDM2AQ9Y2K7 1162 aa9.97□□□□□ -0.81
PACRGL-213ENST00000506552 HDGFP51858 240 aaKnown RBP9.96□□□□□ -0.82
PACRGL-213ENST00000506552 TTC13Q8NBP0 860 aa9.96□□□□□ -0.82
PACRGL-213ENST00000506552 LAPTM4AQ15012 233 aa9.95□□□□□ -0.82
PACRGL-213ENST00000506552 Q6ZNB5 142 aa9.95□□□□□ -0.82
PACRGL-213ENST00000506552 PTGDRQ13258 359 aa9.94□□□□□ -0.82
PACRGL-213ENST00000506552 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
PACRGL-213ENST00000506552 NECTIN2Q92692 538 aa9.94□□□□□ -0.82
PACRGL-213ENST00000506552 SMYD5Q6GMV2 418 aa9.93□□□□□ -0.82
PACRGL-213ENST00000506552 IL21Q9HBE4 155 aa9.93□□□□□ -0.82
PACRGL-213ENST00000506552 TESPA1A2RU30 521 aaPredicted RBP9.92□□□□□ -0.82
PACRGL-213ENST00000506552 MTRQ99707 1265 aa9.92□□□□□ -0.82
PACRGL-213ENST00000506552 RNF40O75150 1001 aa9.91□□□□□ -0.82
PACRGL-213ENST00000506552 VSIG10Q8N0Z9 540 aa9.9□□□□□ -0.82
PACRGL-213ENST00000506552 SLC24A1O60721 1099 aa9.89□□□□□ -0.83
PACRGL-213ENST00000506552 FCHSD2O94868 740 aa9.89□□□□□ -0.83
PACRGL-213ENST00000506552 EYA1Q99502 592 aa9.89□□□□□ -0.83
PACRGL-213ENST00000506552 RBM26Q5T8P6 1007 aaKnown RBP9.88□□□□□ -0.83
PACRGL-213ENST00000506552 SLC4A3P48751 1232 aa9.87□□□□□ -0.83
PACRGL-213ENST00000506552 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
PACRGL-213ENST00000506552 SLF2Q8IX21 1173 aa9.87□□□□□ -0.83
PACRGL-213ENST00000506552 RBM46Q8TBY0 533 aaKnown RBP9.86□□□□□ -0.83
PACRGL-213ENST00000506552 APLP1P51693 650 aa9.85□□□□□ -0.83
PACRGL-213ENST00000506552 PPP1R18Q6NYC8 613 aa9.85□□□□□ -0.83
PACRGL-213ENST00000506552 PRKD2Q9BZL6 878 aa9.85□□□□□ -0.83
PACRGL-213ENST00000506552 V9GY48 417 aaPredicted RBP9.85□□□□□ -0.83
PACRGL-213ENST00000506552 GFRA3O60609 400 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms