RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 C6orf132Q5T0Z8 1188 aa15.77■□□□□ 0.12
RETREG1-203ENST00000506441 GPR37O15354 613 aa15.76■□□□□ 0.11
RETREG1-203ENST00000506441 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
RETREG1-203ENST00000506441 PRIM1P49642 420 aaKnown RBP15.74■□□□□ 0.11
RETREG1-203ENST00000506441 DAXXQ9UER7 740 aaPredicted RBP15.74■□□□□ 0.11
RETREG1-203ENST00000506441 IRF6O14896 467 aa15.72■□□□□ 0.11
RETREG1-203ENST00000506441 NEUROD2Q15784 382 aa15.72■□□□□ 0.11
RETREG1-203ENST00000506441 TSR1Q2NL82 804 aaKnown RBP15.71■□□□□ 0.11
RETREG1-203ENST00000506441 ADAM33Q9BZ11 813 aa15.7■□□□□ 0.1
RETREG1-203ENST00000506441 PTPREP23469 700 aa15.69■□□□□ 0.1
RETREG1-203ENST00000506441 BCL2L12Q9HB09 334 aa15.69■□□□□ 0.1
RETREG1-203ENST00000506441 CDHR5Q9HBB8 845 aa15.69■□□□□ 0.1
RETREG1-203ENST00000506441 NPDC1Q9NQX5 325 aaPredicted RBP15.68■□□□□ 0.1
RETREG1-203ENST00000506441 TRIM66O15016 1216 aa15.66■□□□□ 0.1
RETREG1-203ENST00000506441 RBM27Q9P2N5 1060 aaKnown RBP15.66■□□□□ 0.1
RETREG1-203ENST00000506441 ERBB3P21860 1342 aa15.66■□□□□ 0.1
RETREG1-203ENST00000506441 BRPF1P55201 1214 aaPredicted RBP15.64■□□□□ 0.09
RETREG1-203ENST00000506441 CCDC102AQ96A19 550 aa15.64■□□□□ 0.09
RETREG1-203ENST00000506441 OATP04181 439 aa15.62■□□□□ 0.09
RETREG1-203ENST00000506441 FECHP22830 423 aa15.61■□□□□ 0.09
RETREG1-203ENST00000506441 PDE4DQ08499 809 aa15.61■□□□□ 0.09
RETREG1-203ENST00000506441 PRSS12P56730 875 aa15.6■□□□□ 0.09
RETREG1-203ENST00000506441 PPP1R3GB7ZBB8 358 aa15.59■□□□□ 0.09
RETREG1-203ENST00000506441 EMP3P54852 163 aa15.59■□□□□ 0.09
RETREG1-203ENST00000506441 TMEM132AQ24JP5 1023 aa15.59■□□□□ 0.09
RETREG1-203ENST00000506441 ST18O60284 1047 aa15.58■□□□□ 0.08
RETREG1-203ENST00000506441 FAM163AQ96GL9 167 aaPredicted RBP15.57■□□□□ 0.08
RETREG1-203ENST00000506441 CDCA7LQ96GN5 454 aa15.57■□□□□ 0.08
RETREG1-203ENST00000506441 AMHR2Q16671 573 aa15.55■□□□□ 0.08
RETREG1-203ENST00000506441 PADI6Q6TGC4 694 aa15.55■□□□□ 0.08
RETREG1-203ENST00000506441 PACS2Q86VP3 889 aa15.54■□□□□ 0.08
RETREG1-203ENST00000506441 RBM46Q8TBY0 533 aaKnown RBP15.54■□□□□ 0.08
RETREG1-203ENST00000506441 VARS2Q5ST30 1063 aaKnown RBP15.53■□□□□ 0.08
RETREG1-203ENST00000506441 ONECUT3O60422 494 aaPredicted RBP15.52■□□□□ 0.08
RETREG1-203ENST00000506441 TTLL12Q14166 644 aaPredicted RBP15.52■□□□□ 0.08
RETREG1-203ENST00000506441 KCNK17Q96T54 332 aa15.52■□□□□ 0.08
RETREG1-203ENST00000506441 PBX2P40425 430 aa15.51■□□□□ 0.07
RETREG1-203ENST00000506441 ARHGAP33O14559 1287 aa15.5■□□□□ 0.07
RETREG1-203ENST00000506441 CLCN1P35523 988 aa15.49■□□□□ 0.07
RETREG1-203ENST00000506441 TTC13Q8NBP0 860 aa15.49■□□□□ 0.07
RETREG1-203ENST00000506441 KDM4CQ9H3R0 1056 aa15.49■□□□□ 0.07
RETREG1-203ENST00000506441 COL9A1P20849 921 aa15.48■□□□□ 0.07
RETREG1-203ENST00000506441 NBPF26B4DH59 902 aa15.47■□□□□ 0.07
RETREG1-203ENST00000506441 ADGRG1Q9Y653 693 aa15.47■□□□□ 0.07
RETREG1-203ENST00000506441 FAM205CA6NFA0 338 aa15.46■□□□□ 0.07
RETREG1-203ENST00000506441 TRIM6-TRIM34B2RNG4 842 aa15.46■□□□□ 0.07
RETREG1-203ENST00000506441 MARVELD3Q96A59 401 aa15.46■□□□□ 0.07
RETREG1-203ENST00000506441 METTL3Q86U44 580 aaKnown RBP15.45■□□□□ 0.06
RETREG1-203ENST00000506441 ZNF687Q8N1G0 1237 aa15.45■□□□□ 0.06
RETREG1-203ENST00000506441 GPBP1L1Q9HC44 474 aaPredicted RBP15.45■□□□□ 0.06
RETREG1-203ENST00000506441 PXYLP1Q8TE99 480 aa15.43■□□□□ 0.06
RETREG1-203ENST00000506441 DDRGK1Q96HY6 314 aa15.43■□□□□ 0.06
RETREG1-203ENST00000506441 GPCPD1Q9NPB8 672 aa15.42■□□□□ 0.06
RETREG1-203ENST00000506441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.41■□□□□ 0.06
RETREG1-203ENST00000506441 SLC4A5Q9BY07 1137 aa15.41■□□□□ 0.06
RETREG1-203ENST00000506441 PARP9Q8IXQ6 854 aa15.4■□□□□ 0.06
RETREG1-203ENST00000506441 PNMA3Q9UL41 463 aa15.4■□□□□ 0.06
RETREG1-203ENST00000506441 MDM2Q00987 491 aaPredicted RBP15.39■□□□□ 0.05
RETREG1-203ENST00000506441 TSKSQ9UJT2 592 aa15.39■□□□□ 0.05
RETREG1-203ENST00000506441 FAM161AQ3B820 660 aa15.38■□□□□ 0.05
RETREG1-203ENST00000506441 TATDN2Q93075 761 aa15.38■□□□□ 0.05
RETREG1-203ENST00000506441 ZBED2Q9BTP6 218 aa15.38■□□□□ 0.05
RETREG1-203ENST00000506441 PSEN2P49810 448 aa15.37■□□□□ 0.05
RETREG1-203ENST00000506441 HDGFP51858 240 aaKnown RBP15.37■□□□□ 0.05
RETREG1-203ENST00000506441 GIGYF2Q6Y7W6 1299 aaKnown RBP15.37■□□□□ 0.05
RETREG1-203ENST00000506441 NUDT18Q6ZVK8 323 aa15.37■□□□□ 0.05
RETREG1-203ENST00000506441 IL27Q8NEV9 243 aa15.36■□□□□ 0.05
RETREG1-203ENST00000506441 HS3ST6Q96QI5 342 aa15.36■□□□□ 0.05
RETREG1-203ENST00000506441 DNAJB2P25686 324 aa15.35■□□□□ 0.05
RETREG1-203ENST00000506441 RABGEF1Q9UJ41 708 aa15.35■□□□□ 0.05
RETREG1-203ENST00000506441 PROX2Q3B8N5 592 aa15.34■□□□□ 0.05
RETREG1-203ENST00000506441 EYA1Q99502 592 aa15.34■□□□□ 0.05
RETREG1-203ENST00000506441 KIAA1468Q9P260 1216 aa15.34■□□□□ 0.05
RETREG1-203ENST00000506441 SLC4A3P48751 1232 aa15.33■□□□□ 0.04
RETREG1-203ENST00000506441 RSPH4AQ5TD94 716 aa15.32■□□□□ 0.04
RETREG1-203ENST00000506441 FAM198AQ9UFP1 575 aa15.32■□□□□ 0.04
RETREG1-203ENST00000506441 RCCD1A6NED2 376 aa15.31■□□□□ 0.04
RETREG1-203ENST00000506441 SSTR3P32745 418 aaPredicted RBP15.31■□□□□ 0.04
RETREG1-203ENST00000506441 PHOX2BQ99453 314 aa15.31■□□□□ 0.04
RETREG1-203ENST00000506441 AXIN2Q9Y2T1 843 aa15.31■□□□□ 0.04
RETREG1-203ENST00000506441 SULF1Q8IWU6 871 aa15.3■□□□□ 0.04
RETREG1-203ENST00000506441 NBPF3Q9H094 633 aa15.3■□□□□ 0.04
RETREG1-203ENST00000506441 TK2O00142 265 aa15.29■□□□□ 0.04
RETREG1-203ENST00000506441 STAC3Q96MF2 364 aa15.29■□□□□ 0.04
RETREG1-203ENST00000506441 TMUB1Q9BVT8 246 aa15.29■□□□□ 0.04
RETREG1-203ENST00000506441 FAM117AQ9C073 453 aa15.28■□□□□ 0.04
RETREG1-203ENST00000506441 DMRTA1Q5VZB9 504 aa15.26■□□□□ 0.03
RETREG1-203ENST00000506441 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
RETREG1-203ENST00000506441 FAM217BQ9NTX9 383 aaPredicted RBP15.26■□□□□ 0.03
RETREG1-203ENST00000506441 VPS9D1Q9Y2B5 631 aa15.26■□□□□ 0.03
RETREG1-203ENST00000506441 DIXDC1Q155Q3 683 aa15.25■□□□□ 0.03
RETREG1-203ENST00000506441 LAPTM4BQ86VI4 370 aa15.25■□□□□ 0.03
RETREG1-203ENST00000506441 GTF3C3Q9Y5Q9 886 aa15.25■□□□□ 0.03
RETREG1-203ENST00000506441 POTEEQ6S8J3 1075 aa15.24■□□□□ 0.03
RETREG1-203ENST00000506441 REPIN1Q9BWE0 567 aaKnown RBP15.24■□□□□ 0.03
RETREG1-203ENST00000506441 ERICH6Q7L0X2 663 aa15.23■□□□□ 0.03
RETREG1-203ENST00000506441 TMEM134Q9H6X4 195 aa15.23■□□□□ 0.03
RETREG1-203ENST00000506441 SMAPO00193 183 aa15.22■□□□□ 0.03
RETREG1-203ENST00000506441 MS4A1P11836 297 aa15.22■□□□□ 0.03
RETREG1-203ENST00000506441 FAM98CQ17RN3 349 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms