RNA–Protein interactions for RNA: ENST00000506372.5

CDH18-205, Transcript of cadherin 18, humanhuman

TSL 1 (best) BASIC

Gene CDH18, Length 2,432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-205ENST00000506372 MLH3Q9UHC1 1453 aa10.14□□□□□ -0.79
CDH18-205ENST00000506372 DHX29Q7Z478 1369 aaKnown RBP10.14□□□□□ -0.79
CDH18-205ENST00000506372 VWDEQ8N2E2 1590 aa10.12□□□□□ -0.79
CDH18-205ENST00000506372 PLA2R1Q13018 1463 aa10.12□□□□□ -0.79
CDH18-205ENST00000506372 ATP10AO60312 1499 aa10.12□□□□□ -0.79
CDH18-205ENST00000506372 HECW2Q9P2P5 1572 aa10.11□□□□□ -0.79
CDH18-205ENST00000506372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDH18-205ENST00000506372 RICTORQ6R327 1708 aa10.11□□□□□ -0.79
CDH18-205ENST00000506372 MROH1Q8NDA8 1641 aa10.11□□□□□ -0.79
CDH18-205ENST00000506372 PPRC1Q5VV67 1664 aaKnown RBP10.1□□□□□ -0.79
CDH18-205ENST00000506372 PRDM15P57071 1507 aaPredicted RBP10.1□□□□□ -0.79
CDH18-205ENST00000506372 NBPF8Q3BBV2 869 aa10.09□□□□□ -0.79
CDH18-205ENST00000506372 FRMPD1Q5SYB0 1578 aa10.09□□□□□ -0.79
CDH18-205ENST00000506372 FAM69CQ0P6D2 419 aa10.09□□□□□ -0.79
CDH18-205ENST00000506372 A2MP01023 1474 aa10.09□□□□□ -0.79
CDH18-205ENST00000506372 E9PCH4 1651 aa10.09□□□□□ -0.79
CDH18-205ENST00000506372 BCORL1Q5H9F3 1711 aa10.09□□□□□ -0.79
CDH18-205ENST00000506372 TET3O43151 1660 aa10.09□□□□□ -0.79
CDH18-205ENST00000506372 ABCA6Q8N139 1617 aa10.08□□□□□ -0.8
CDH18-205ENST00000506372 RNF17Q9BXT8 1623 aaKnown RBP10.08□□□□□ -0.8
CDH18-205ENST00000506372 KIF3BO15066 747 aa10.07□□□□□ -0.8
CDH18-205ENST00000506372 RAPGEF3O95398 923 aa10.07□□□□□ -0.8
CDH18-205ENST00000506372 UHRF1BP1Q6BDS2 1440 aa10.07□□□□□ -0.8
CDH18-205ENST00000506372 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
CDH18-205ENST00000506372 KIF13AQ9H1H9 1805 aa10.07□□□□□ -0.8
CDH18-205ENST00000506372 CCDC144AA2RUR9 1427 aa10.07□□□□□ -0.8
CDH18-205ENST00000506372 PTPRTO14522 1441 aa10.06□□□□□ -0.8
CDH18-205ENST00000506372 DIP2CQ9Y2E4 1556 aa10.06□□□□□ -0.8
CDH18-205ENST00000506372 TSPOAP1O95153 1857 aa10.05□□□□□ -0.8
CDH18-205ENST00000506372 LMTK2Q8IWU2 1503 aa10.05□□□□□ -0.8
CDH18-205ENST00000506372 KANK1Q14678 1352 aa10.05□□□□□ -0.8
CDH18-205ENST00000506372 MIER1Q8N108 512 aa10.05□□□□□ -0.8
CDH18-205ENST00000506372 SPHKAPQ2M3C7 1700 aa10.05□□□□□ -0.8
CDH18-205ENST00000506372 TRPM2O94759 1503 aa10.04□□□□□ -0.8
CDH18-205ENST00000506372 ZMYM4Q5VZL5 1548 aa10.04□□□□□ -0.8
CDH18-205ENST00000506372 HIRIP3Q9BW71 556 aaPredicted RBP10.04□□□□□ -0.8
CDH18-205ENST00000506372 SPATA31E1Q6ZUB1 1445 aa10.03□□□□□ -0.8
CDH18-205ENST00000506372 EFCAB6Q5THR3 1501 aa10.03□□□□□ -0.8
CDH18-205ENST00000506372 HSPA5P11021 654 aaKnown RBP10.03□□□□□ -0.8
CDH18-205ENST00000506372 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDH18-205ENST00000506372 CEP152O94986 1710 aa10.02□□□□□ -0.81
CDH18-205ENST00000506372 RALGAPBQ86X10 1494 aa10.02□□□□□ -0.81
CDH18-205ENST00000506372 YEATS2Q9ULM3 1422 aa10.02□□□□□ -0.81
CDH18-205ENST00000506372 CLTCL1P53675 1640 aa10.01□□□□□ -0.81
CDH18-205ENST00000506372 DCAF11Q8TEB1 546 aa10.01□□□□□ -0.81
CDH18-205ENST00000506372 NEURL4Q96JN8 1562 aa10□□□□□ -0.81
CDH18-205ENST00000506372 PRAG1Q86YV5 1406 aa10□□□□□ -0.81
CDH18-205ENST00000506372 DDX10Q13206 875 aaKnown RBP9.99□□□□□ -0.81
CDH18-205ENST00000506372 ABCC3O15438 1527 aa9.99□□□□□ -0.81
CDH18-205ENST00000506372 REREQ9P2R6 1566 aa9.99□□□□□ -0.81
CDH18-205ENST00000506372 TRPM1Q7Z4N2 1603 aa9.98□□□□□ -0.81
CDH18-205ENST00000506372 KDM2AQ9Y2K7 1162 aa9.98□□□□□ -0.81
CDH18-205ENST00000506372 COL17A1Q9UMD9 1497 aaPredicted RBP9.98□□□□□ -0.81
CDH18-205ENST00000506372 RGL3Q3MIN7 710 aa9.97□□□□□ -0.81
CDH18-205ENST00000506372 ZNF326Q5BKZ1 582 aaKnown RBP9.97□□□□□ -0.81
CDH18-205ENST00000506372 GGT6Q6P531 493 aa9.97□□□□□ -0.81
CDH18-205ENST00000506372 NPATQ14207 1427 aa9.97□□□□□ -0.81
CDH18-205ENST00000506372 WASHC2AQ641Q2 1341 aa9.97□□□□□ -0.81
CDH18-205ENST00000506372 POLR1AO95602 1720 aaPredicted RBP9.97□□□□□ -0.81
CDH18-205ENST00000506372 CAMSAP1Q5T5Y3 1602 aa9.96□□□□□ -0.81
CDH18-205ENST00000506372 ZC3H13Q5T200 1668 aaKnown RBP9.96□□□□□ -0.81
CDH18-205ENST00000506372 USP47Q96K76 1375 aa9.96□□□□□ -0.81
CDH18-205ENST00000506372 GPRASP1Q5JY77 1395 aa9.96□□□□□ -0.82
CDH18-205ENST00000506372 C11orf95C9JLR9 678 aaPredicted RBP9.95□□□□□ -0.82
CDH18-205ENST00000506372 AGLP35573 1532 aa9.95□□□□□ -0.82
CDH18-205ENST00000506372 WASHC2CQ9Y4E1 1318 aa9.95□□□□□ -0.82
CDH18-205ENST00000506372 UGGT1Q9NYU2 1555 aa9.95□□□□□ -0.82
CDH18-205ENST00000506372 KIF1BO60333 1816 aa9.95□□□□□ -0.82
CDH18-205ENST00000506372 LAMC1P11047 1609 aa9.95□□□□□ -0.82
CDH18-205ENST00000506372 ARHGAP31Q2M1Z3 1444 aa9.95□□□□□ -0.82
CDH18-205ENST00000506372 SIGLEC1Q9BZZ2 1709 aa9.94□□□□□ -0.82
CDH18-205ENST00000506372 STAC3Q96MF2 364 aa9.94□□□□□ -0.82
CDH18-205ENST00000506372 CCDC7Q96M83 1385 aa9.94□□□□□ -0.82
CDH18-205ENST00000506372 CFAP65Q6ZU64 1925 aaKnown RBP9.94□□□□□ -0.82
CDH18-205ENST00000506372 NOS1P29475 1434 aa9.94□□□□□ -0.82
CDH18-205ENST00000506372 CNTLNQ9NXG0 1405 aa9.94□□□□□ -0.82
CDH18-205ENST00000506372 MADDQ8WXG6 1647 aa9.93□□□□□ -0.82
CDH18-205ENST00000506372 CARD11Q9BXL7 1154 aa9.93□□□□□ -0.82
CDH18-205ENST00000506372 ROCK2O75116 1388 aaKnown RBP9.93□□□□□ -0.82
CDH18-205ENST00000506372 ARHGEF40Q8TER5 1519 aa9.93□□□□□ -0.82
CDH18-205ENST00000506372 MROH2AA6NES4 1674 aa9.92□□□□□ -0.82
CDH18-205ENST00000506372 IFT172Q9UG01 1749 aa9.92□□□□□ -0.82
CDH18-205ENST00000506372 PIK3C2BO00750 1634 aa9.92□□□□□ -0.82
CDH18-205ENST00000506372 ADGRB3O60242 1522 aa9.92□□□□□ -0.82
CDH18-205ENST00000506372 NBPF1Q3BBV0 1214 aa9.92□□□□□ -0.82
CDH18-205ENST00000506372 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
CDH18-205ENST00000506372 SYNMO15061 1565 aa9.9□□□□□ -0.82
CDH18-205ENST00000506372 MYOM2P54296 1465 aa9.9□□□□□ -0.82
CDH18-205ENST00000506372 ARID4BQ4LE39 1312 aaPredicted RBP9.9□□□□□ -0.82
CDH18-205ENST00000506372 PPP6R1Q9UPN7 881 aa9.9□□□□□ -0.82
CDH18-205ENST00000506372 KIAA1210Q9ULL0 1709 aa9.9□□□□□ -0.82
CDH18-205ENST00000506372 ST20-MTHFSA0A0A6YYL1 179 aa9.89□□□□□ -0.83
CDH18-205ENST00000506372 NRXN1Q9ULB1 1477 aa9.89□□□□□ -0.83
CDH18-205ENST00000506372 PREX1Q8TCU6 1659 aa9.89□□□□□ -0.83
CDH18-205ENST00000506372 PPLO60437 1756 aa9.88□□□□□ -0.83
CDH18-205ENST00000506372 IQGAP1P46940 1657 aa9.87□□□□□ -0.83
CDH18-205ENST00000506372 ANP32CO43423 234 aa9.86□□□□□ -0.83
CDH18-205ENST00000506372 CLTCQ00610 1675 aaKnown RBP9.86□□□□□ -0.83
CDH18-205ENST00000506372 CCER2I3L3R5 266 aa9.85□□□□□ -0.83
CDH18-205ENST00000506372 RPGRIP1LQ68CZ1 1315 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms