RNA–Protein interactions for RNA: ENST00000506357.5

SGCB-202, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-202ENST00000506357 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
SGCB-202ENST00000506357 TSR1Q2NL82 804 aaKnown RBP10.62□□□□□ -0.71
SGCB-202ENST00000506357 CERKQ8TCT0 537 aa10.62□□□□□ -0.71
SGCB-202ENST00000506357 CDHR5Q9HBB8 845 aa10.62□□□□□ -0.71
SGCB-202ENST00000506357 C6orf132Q5T0Z8 1188 aa10.6□□□□□ -0.71
SGCB-202ENST00000506357 ADAM33Q9BZ11 813 aa10.59□□□□□ -0.71
SGCB-202ENST00000506357 IRF6O14896 467 aa10.58□□□□□ -0.72
SGCB-202ENST00000506357 BRPF1P55201 1214 aaPredicted RBP10.58□□□□□ -0.72
SGCB-202ENST00000506357 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
SGCB-202ENST00000506357 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
SGCB-202ENST00000506357 TRIM66O15016 1216 aa10.56□□□□□ -0.72
SGCB-202ENST00000506357 FECHP22830 423 aa10.56□□□□□ -0.72
SGCB-202ENST00000506357 NPDC1Q9NQX5 325 aaPredicted RBP10.56□□□□□ -0.72
SGCB-202ENST00000506357 BCL2L12Q9HB09 334 aa10.55□□□□□ -0.72
SGCB-202ENST00000506357 PTPREP23469 700 aa10.54□□□□□ -0.72
SGCB-202ENST00000506357 PDE4DQ08499 809 aa10.52□□□□□ -0.73
SGCB-202ENST00000506357 RBM27Q9P2N5 1060 aaKnown RBP10.52□□□□□ -0.73
SGCB-202ENST00000506357 ERBB3P21860 1342 aa10.52□□□□□ -0.73
SGCB-202ENST00000506357 EMP3P54852 163 aa10.5□□□□□ -0.73
SGCB-202ENST00000506357 PADI6Q6TGC4 694 aa10.5□□□□□ -0.73
SGCB-202ENST00000506357 PPP1R3GB7ZBB8 358 aa10.49□□□□□ -0.73
SGCB-202ENST00000506357 ST18O60284 1047 aa10.49□□□□□ -0.73
SGCB-202ENST00000506357 PRSS12P56730 875 aa10.49□□□□□ -0.73
SGCB-202ENST00000506357 TMEM132AQ24JP5 1023 aa10.49□□□□□ -0.73
SGCB-202ENST00000506357 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
SGCB-202ENST00000506357 OATP04181 439 aa10.48□□□□□ -0.73
SGCB-202ENST00000506357 TTLL12Q14166 644 aaPredicted RBP10.48□□□□□ -0.73
SGCB-202ENST00000506357 AMHR2Q16671 573 aa10.48□□□□□ -0.73
SGCB-202ENST00000506357 CDCA7LQ96GN5 454 aa10.48□□□□□ -0.73
SGCB-202ENST00000506357 KCNK17Q96T54 332 aa10.48□□□□□ -0.73
SGCB-202ENST00000506357 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
SGCB-202ENST00000506357 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
SGCB-202ENST00000506357 COL9A1P20849 921 aa10.46□□□□□ -0.73
SGCB-202ENST00000506357 FAM163AQ96GL9 167 aaPredicted RBP10.46□□□□□ -0.73
SGCB-202ENST00000506357 KDM4CQ9H3R0 1056 aa10.46□□□□□ -0.73
SGCB-202ENST00000506357 RBM46Q8TBY0 533 aaKnown RBP10.44□□□□□ -0.74
SGCB-202ENST00000506357 MARVELD3Q96A59 401 aa10.44□□□□□ -0.74
SGCB-202ENST00000506357 ADGRG1Q9Y653 693 aa10.44□□□□□ -0.74
SGCB-202ENST00000506357 TTC13Q8NBP0 860 aa10.43□□□□□ -0.74
SGCB-202ENST00000506357 CLCN1P35523 988 aa10.42□□□□□ -0.74
SGCB-202ENST00000506357 FAM161AQ3B820 660 aa10.42□□□□□ -0.74
SGCB-202ENST00000506357 METTL3Q86U44 580 aaKnown RBP10.42□□□□□ -0.74
SGCB-202ENST00000506357 PACS2Q86VP3 889 aa10.42□□□□□ -0.74
SGCB-202ENST00000506357 PARP9Q8IXQ6 854 aa10.42□□□□□ -0.74
SGCB-202ENST00000506357 FAM205CA6NFA0 338 aa10.41□□□□□ -0.74
SGCB-202ENST00000506357 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
SGCB-202ENST00000506357 TRIM6-TRIM34B2RNG4 842 aa10.4□□□□□ -0.74
SGCB-202ENST00000506357 ARHGAP33O14559 1287 aa10.4□□□□□ -0.74
SGCB-202ENST00000506357 PBX2P40425 430 aa10.4□□□□□ -0.74
SGCB-202ENST00000506357 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
SGCB-202ENST00000506357 PXYLP1Q8TE99 480 aa10.39□□□□□ -0.75
SGCB-202ENST00000506357 GPCPD1Q9NPB8 672 aa10.39□□□□□ -0.75
SGCB-202ENST00000506357 GIGYF2Q6Y7W6 1299 aaKnown RBP10.38□□□□□ -0.75
SGCB-202ENST00000506357 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
SGCB-202ENST00000506357 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
SGCB-202ENST00000506357 PSEN2P49810 448 aa10.37□□□□□ -0.75
SGCB-202ENST00000506357 IL27Q8NEV9 243 aa10.37□□□□□ -0.75
SGCB-202ENST00000506357 DDRGK1Q96HY6 314 aa10.37□□□□□ -0.75
SGCB-202ENST00000506357 PROX2Q3B8N5 592 aa10.36□□□□□ -0.75
SGCB-202ENST00000506357 ZNF687Q8N1G0 1237 aa10.36□□□□□ -0.75
SGCB-202ENST00000506357 FAM198AQ9UFP1 575 aa10.36□□□□□ -0.75
SGCB-202ENST00000506357 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
SGCB-202ENST00000506357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.35□□□□□ -0.75
SGCB-202ENST00000506357 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
SGCB-202ENST00000506357 TATDN2Q93075 761 aa10.35□□□□□ -0.75
SGCB-202ENST00000506357 PHOX2BQ99453 314 aa10.35□□□□□ -0.75
SGCB-202ENST00000506357 ZBED2Q9BTP6 218 aa10.35□□□□□ -0.75
SGCB-202ENST00000506357 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
SGCB-202ENST00000506357 AXIN2Q9Y2T1 843 aa10.34□□□□□ -0.75
SGCB-202ENST00000506357 RCCD1A6NED2 376 aa10.32□□□□□ -0.76
SGCB-202ENST00000506357 DNAJB2P25686 324 aa10.32□□□□□ -0.76
SGCB-202ENST00000506357 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
SGCB-202ENST00000506357 EYA1Q99502 592 aa10.32□□□□□ -0.76
SGCB-202ENST00000506357 SLC4A5Q9BY07 1137 aa10.32□□□□□ -0.76
SGCB-202ENST00000506357 FAM117AQ9C073 453 aa10.32□□□□□ -0.76
SGCB-202ENST00000506357 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
SGCB-202ENST00000506357 RABGEF1Q9UJ41 708 aa10.31□□□□□ -0.76
SGCB-202ENST00000506357 SSTR3P32745 418 aaPredicted RBP10.3□□□□□ -0.76
SGCB-202ENST00000506357 DMRTA1Q5VZB9 504 aa10.3□□□□□ -0.76
SGCB-202ENST00000506357 TMUB1Q9BVT8 246 aa10.3□□□□□ -0.76
SGCB-202ENST00000506357 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
SGCB-202ENST00000506357 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
SGCB-202ENST00000506357 SMAPO00193 183 aa10.28□□□□□ -0.76
SGCB-202ENST00000506357 MS4A1P11836 297 aa10.28□□□□□ -0.76
SGCB-202ENST00000506357 NBPF3Q9H094 633 aa10.28□□□□□ -0.76
SGCB-202ENST00000506357 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
SGCB-202ENST00000506357 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
SGCB-202ENST00000506357 HDGFP51858 240 aaKnown RBP10.27□□□□□ -0.77
SGCB-202ENST00000506357 SULF1Q8IWU6 871 aa10.27□□□□□ -0.77
SGCB-202ENST00000506357 VPS9D1Q9Y2B5 631 aa10.27□□□□□ -0.77
SGCB-202ENST00000506357 SLC4A3P48751 1232 aa10.26□□□□□ -0.77
SGCB-202ENST00000506357 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
SGCB-202ENST00000506357 C3orf80F5H4A9 247 aa10.25□□□□□ -0.77
SGCB-202ENST00000506357 TK2O00142 265 aa10.25□□□□□ -0.77
SGCB-202ENST00000506357 BEGAINQ9BUH8 593 aa10.25□□□□□ -0.77
SGCB-202ENST00000506357 SEPT9Q9UHD8 586 aaPredicted RBP10.25□□□□□ -0.77
SGCB-202ENST00000506357 PLEKHG3A1L390 1219 aa10.24□□□□□ -0.77
SGCB-202ENST00000506357 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
SGCB-202ENST00000506357 RSPH4AQ5TD94 716 aa10.24□□□□□ -0.77
SGCB-202ENST00000506357 POTEB3A0JP26 581 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms