RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 CALD1Q05682 793 aaKnown RBP3.18□□□□□ -1.9
ITGA1-204ENST00000506275 CEP89Q96ST8 783 aa3.18□□□□□ -1.9
ITGA1-204ENST00000506275 TMX4Q9H1E5 349 aaPredicted RBP3.18□□□□□ -1.9
ITGA1-204ENST00000506275 MAPK8IP2Q13387 824 aaPredicted RBP3.18□□□□□ -1.9
ITGA1-204ENST00000506275 KRI1Q8N9T8 703 aaKnown RBP3.18□□□□□ -1.9
ITGA1-204ENST00000506275 FYB1O15117 783 aa3.18□□□□□ -1.9
ITGA1-204ENST00000506275 APPP05067 770 aa3.18□□□□□ -1.9
ITGA1-204ENST00000506275 IBSPP21815 317 aaPredicted RBP3.18□□□□□ -1.9
ITGA1-204ENST00000506275 VSIG10Q8N0Z9 540 aa3.18□□□□□ -1.9
ITGA1-204ENST00000506275 HSPA5P11021 654 aaKnown RBP3.18□□□□□ -1.9
ITGA1-204ENST00000506275 AMPHP49418 695 aa3.18□□□□□ -1.9
ITGA1-204ENST00000506275 TPD52L1Q16890 204 aaPredicted RBP3.18□□□□□ -1.9
ITGA1-204ENST00000506275 NUTM2GQ5VZR2 741 aa3.18□□□□□ -1.9
ITGA1-204ENST00000506275 MYO15BQ96JP2 1530 aa3.18□□□□□ -1.9
ITGA1-204ENST00000506275 ANKRD45Q5TZF3 282 aa3.17□□□□□ -1.9
ITGA1-204ENST00000506275 TTLL5Q6EMB2 1281 aa3.17□□□□□ -1.9
ITGA1-204ENST00000506275 DHX16O60231 1041 aaKnown RBP3.17□□□□□ -1.9
ITGA1-204ENST00000506275 PKD2Q13563 968 aa3.17□□□□□ -1.9
ITGA1-204ENST00000506275 ATRXP46100 2492 aa3.17□□□□□ -1.9
ITGA1-204ENST00000506275 STK31Q9BXU1 1019 aa3.17□□□□□ -1.9
ITGA1-204ENST00000506275 PCMTD1Q96MG8 357 aaPredicted RBP3.17□□□□□ -1.9
ITGA1-204ENST00000506275 H3BQV1 296 aa3.17□□□□□ -1.9
ITGA1-204ENST00000506275 IFFO2Q5TF58 517 aa3.17□□□□□ -1.9
ITGA1-204ENST00000506275 GBP4Q96PP9 640 aa3.17□□□□□ -1.9
ITGA1-204ENST00000506275 EVA1CP58658 441 aa3.16□□□□□ -1.9
ITGA1-204ENST00000506275 FAM13BQ9NYF5 915 aa3.16□□□□□ -1.9
ITGA1-204ENST00000506275 DDX49Q9Y6V7 483 aaKnown RBP3.16□□□□□ -1.9
ITGA1-204ENST00000506275 GOLGA6L3A6NEY3 463 aa3.16□□□□□ -1.9
ITGA1-204ENST00000506275 ATP2B1P20020 1258 aa3.16□□□□□ -1.9
ITGA1-204ENST00000506275 GOLGA6L1Q8N7Z2 621 aa3.16□□□□□ -1.9
ITGA1-204ENST00000506275 ZFYVE27Q5T4F4 411 aa3.16□□□□□ -1.9
ITGA1-204ENST00000506275 HDGFL2Q7Z4V5 671 aaPredicted RBP3.16□□□□□ -1.9
ITGA1-204ENST00000506275 FAM184AQ8NB25 1140 aa3.16□□□□□ -1.9
ITGA1-204ENST00000506275 COG6Q9Y2V7 657 aa3.16□□□□□ -1.9
ITGA1-204ENST00000506275 AIMP1Q12904 312 aaKnown RBP3.16□□□□□ -1.9
ITGA1-204ENST00000506275 KIF3BO15066 747 aa3.15□□□□□ -1.9
ITGA1-204ENST00000506275 CIZ1Q9ULV3 898 aaPredicted RBP3.15□□□□□ -1.9
ITGA1-204ENST00000506275 IPO8O15397 1037 aaKnown RBP3.15□□□□□ -1.9
ITGA1-204ENST00000506275 BECN2A8MW95 431 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 TPM3P06753 285 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 HNRNPMP52272 730 aaKnown RBP eCLIP3.15□□□□□ -1.914e-6■■■■□ 22.8
ITGA1-204ENST00000506275 HSP90AA2PQ14568 343 aaPredicted RBP3.15□□□□□ -1.91
ITGA1-204ENST00000506275 KIF16BQ96L93 1317 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 TCEAL9Q9UHQ7 104 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 SPAG9O60271 1321 aaKnown RBP3.15□□□□□ -1.91
ITGA1-204ENST00000506275 MS4A1P11836 297 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 NAP1L1P55209 391 aaKnown RBP3.15□□□□□ -1.91
ITGA1-204ENST00000506275 GOLGA6L19H0YKK7 550 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 NPM3O75607 178 aaKnown RBP3.15□□□□□ -1.91
ITGA1-204ENST00000506275 VPS37DQ86XT2 251 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 RNF214Q8ND24 703 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 FMNL2Q96PY5 1086 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 TSHZ2Q9NRE2 1034 aa3.15□□□□□ -1.91
ITGA1-204ENST00000506275 HMOX1P09601 288 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 RWDD1Q9H446 243 aaPredicted RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 VPS37CA5D8V6 355 aaPredicted RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 PAF1Q8N7H5 531 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 AKAP17AQ02040 695 aaKnown RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 FAM161AQ3B820 660 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 KANK4Q5T7N3 995 aaPredicted RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 HOMER1Q86YM7 354 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 C9orf78Q9NZ63 289 aaPredicted RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 ROCK2O75116 1388 aaKnown RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 ZNF771Q7L3S4 317 aaPredicted RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 CHMP4BQ9H444 224 aaKnown RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 CEP162Q5TB80 1403 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 TPM4P67936 248 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 CEBPZQ03701 1054 aaKnown RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 GPATCH3Q96I76 525 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 CCDC27Q2M243 656 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 TSR1Q2NL82 804 aaKnown RBP3.14□□□□□ -1.91
ITGA1-204ENST00000506275 EXOC6Q8TAG9 804 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 PLCD4Q9BRC7 762 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 LNPKQ9C0E8 428 aa3.14□□□□□ -1.91
ITGA1-204ENST00000506275 MINK1Q8N4C8 1332 aaPredicted RBP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 URB1O60287 2271 aaKnown RBP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 BRPF1P55201 1214 aaPredicted RBP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 ZBTB9Q96C00 473 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 EIF4G1Q04637 1599 aaKnown RBP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 IKQ13123 557 aaPredicted RBP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 BICD2Q8TD16 824 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 SYAP1Q96A49 352 aaPredicted RBP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 NEUROD6Q96NK8 337 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 ATP2B2Q01814 1243 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 TEFQ10587 303 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 WDR70Q9NW82 654 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 CTDP1Q9Y5B0 961 aaPredicted RBP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 APAF1O14727 1248 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 CHMP4BP1P59074 171 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 CRBNQ96SW2 442 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 CWC22Q9HCG8 908 aaKnown RBP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 IPO9Q96P70 1041 aaKnown RBP3.13□□□□□ -1.91
ITGA1-204ENST00000506275 TRIM34Q9BYJ4 488 aa3.13□□□□□ -1.91
ITGA1-204ENST00000506275 ST20-MTHFSA0A0A6YYL1 179 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 ST18O60284 1047 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 CYB5RLQ6IPT4 315 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 NFXL1Q6ZNB6 911 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 PIBF1Q8WXW3 757 aa3.12□□□□□ -1.91
ITGA1-204ENST00000506275 ANO2Q9NQ90 1003 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms