RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ZNF142P52746 1687 aaPredicted RBP26.31■■□□□ 1.8
PDLIM7-215ENST00000506161 NPATQ14207 1427 aa26.31■■□□□ 1.8
PDLIM7-215ENST00000506161 IQSEC2Q5JU85 1478 aa26.31■■□□□ 1.8
PDLIM7-215ENST00000506161 RNF17Q9BXT8 1623 aaKnown RBP26.31■■□□□ 1.8
PDLIM7-215ENST00000506161 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
PDLIM7-215ENST00000506161 DNMT1P26358 1616 aaKnown RBP26.3■■□□□ 1.8
PDLIM7-215ENST00000506161 LTBP4Q8N2S1 1624 aa26.3■■□□□ 1.8
PDLIM7-215ENST00000506161 ABCC5O15440 1437 aa26.3■■□□□ 1.8
PDLIM7-215ENST00000506161 FGD6Q6ZV73 1430 aa26.3■■□□□ 1.8
PDLIM7-215ENST00000506161 APLP2Q06481 763 aa26.28■■□□□ 1.8
PDLIM7-215ENST00000506161 KDM5DQ9BY66 1539 aa26.28■■□□□ 1.8
PDLIM7-215ENST00000506161 TSPY4P0CV99 314 aa26.27■■□□□ 1.8
PDLIM7-215ENST00000506161 TSPY10P0CW01 314 aa26.27■■□□□ 1.8
PDLIM7-215ENST00000506161 EIF2AK4Q9P2K8 1649 aaKnown RBP26.26■■□□□ 1.79
PDLIM7-215ENST00000506161 CEP152O94986 1710 aa26.25■■□□□ 1.79
PDLIM7-215ENST00000506161 CEP170BQ9Y4F5 1589 aaPredicted RBP26.24■■□□□ 1.79
PDLIM7-215ENST00000506161 CAMSAP1Q5T5Y3 1602 aa26.24■■□□□ 1.79
PDLIM7-215ENST00000506161 DAPK1P53355 1430 aa26.23■■□□□ 1.79
PDLIM7-215ENST00000506161 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
PDLIM7-215ENST00000506161 SHANK2Q9UPX8 1470 aa26.22■■□□□ 1.79
PDLIM7-215ENST00000506161 FBXO31Q5XUX0 539 aaPredicted RBP26.21■■□□□ 1.79
PDLIM7-215ENST00000506161 PPP6R1Q9UPN7 881 aa26.21■■□□□ 1.79
PDLIM7-215ENST00000506161 FAM135AQ9P2D6 1515 aa26.2■■□□□ 1.79
PDLIM7-215ENST00000506161 ABCC3O15438 1527 aa26.19■■□□□ 1.78
PDLIM7-215ENST00000506161 DUOX2Q9NRD8 1548 aa26.19■■□□□ 1.78
PDLIM7-215ENST00000506161 PZPP20742 1482 aa26.19■■□□□ 1.78
PDLIM7-215ENST00000506161 CFAP65Q6ZU64 1925 aaKnown RBP26.18■■□□□ 1.78
PDLIM7-215ENST00000506161 ZC3H13Q5T200 1668 aaKnown RBP26.18■■□□□ 1.78
PDLIM7-215ENST00000506161 KIF15Q9NS87 1388 aa26.15■■□□□ 1.78
PDLIM7-215ENST00000506161 WASHC2CQ9Y4E1 1318 aa26.14■■□□□ 1.77
PDLIM7-215ENST00000506161 DEPDC5O75140 1603 aa26.13■■□□□ 1.77
PDLIM7-215ENST00000506161 RRP7BPQ9NSQ0 103 aa26.12■■□□□ 1.77
PDLIM7-215ENST00000506161 A2ML1A8K2U0 1454 aa26.11■■□□□ 1.77
PDLIM7-215ENST00000506161 PRDM15P57071 1507 aaPredicted RBP26.11■■□□□ 1.77
PDLIM7-215ENST00000506161 UBAP1LF5GYI3 381 aa26.11■■□□□ 1.77
PDLIM7-215ENST00000506161 TNRQ92752 1358 aa26.1■■□□□ 1.77
PDLIM7-215ENST00000506161 CHIC2Q9UKJ5 165 aa26.1■■□□□ 1.77
PDLIM7-215ENST00000506161 NCKAP5LQ9HCH0 1330 aa26.1■■□□□ 1.77
PDLIM7-215ENST00000506161 ZNF335Q9H4Z2 1342 aaPredicted RBP26.08■■□□□ 1.77
PDLIM7-215ENST00000506161 ERBINQ96RT1 1412 aa26.07■■□□□ 1.76
PDLIM7-215ENST00000506161 PLA2R1Q13018 1463 aa26.07■■□□□ 1.76
PDLIM7-215ENST00000506161 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
PDLIM7-215ENST00000506161 POLR1AO95602 1720 aaPredicted RBP26.06■■□□□ 1.76
PDLIM7-215ENST00000506161 ADGRL2O95490 1459 aa26.04■■□□□ 1.76
PDLIM7-215ENST00000506161 NEURL4Q96JN8 1562 aa26.04■■□□□ 1.76
PDLIM7-215ENST00000506161 ERVK-7P63135 1459 aa26.04■■□□□ 1.76
PDLIM7-215ENST00000506161 FAM50AQ14320 339 aaKnown RBP26.02■■□□□ 1.76
PDLIM7-215ENST00000506161 VWDEQ8N2E2 1590 aa26.01■■□□□ 1.75
PDLIM7-215ENST00000506161 ANKRD30AQ9BXX3 1397 aa25.99■■□□□ 1.75
PDLIM7-215ENST00000506161 PKD2Q13563 968 aa25.99■■□□□ 1.75
PDLIM7-215ENST00000506161 NLRP1Q9C000 1473 aa25.97■■□□□ 1.75
PDLIM7-215ENST00000506161 UBR1Q8IWV7 1749 aa25.97■■□□□ 1.75
PDLIM7-215ENST00000506161 UGGT1Q9NYU2 1555 aa25.96■■□□□ 1.75
PDLIM7-215ENST00000506161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.95■■□□□ 1.74
PDLIM7-215ENST00000506161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.95■■□□□ 1.742e-6■■■■□ 23.1
PDLIM7-215ENST00000506161 LMTK2Q8IWU2 1503 aa25.92■■□□□ 1.74
PDLIM7-215ENST00000506161 ARHGAP31Q2M1Z3 1444 aa25.91■■□□□ 1.74
PDLIM7-215ENST00000506161 PIK3C2BO00750 1634 aa25.89■■□□□ 1.74
PDLIM7-215ENST00000506161 SYNMO15061 1565 aa25.88■■□□□ 1.73
PDLIM7-215ENST00000506161 MED1Q15648 1581 aaPredicted RBP25.88■■□□□ 1.73
PDLIM7-215ENST00000506161 SCAF1Q9H7N4 1312 aaKnown RBP25.88■■□□□ 1.73
PDLIM7-215ENST00000506161 EFCAB6Q5THR3 1501 aa25.87■■□□□ 1.73
PDLIM7-215ENST00000506161 ANKRD50Q9ULJ7 1429 aa25.87■■□□□ 1.73
PDLIM7-215ENST00000506161 UNC13BO14795 1591 aa25.86■■□□□ 1.73
PDLIM7-215ENST00000506161 HSPA1LP34931 641 aa25.86■■□□□ 1.73
PDLIM7-215ENST00000506161 PIP4K2BP78356 416 aa25.84■■□□□ 1.73
PDLIM7-215ENST00000506161 STRCP1A6NGW2 1772 aa25.84■■□□□ 1.73
PDLIM7-215ENST00000506161 IQGAP1P46940 1657 aa25.83■■□□□ 1.73
PDLIM7-215ENST00000506161 MED14O60244 1454 aa25.81■■□□□ 1.72
PDLIM7-215ENST00000506161 TOM1O60784 492 aa25.81■■□□□ 1.72
PDLIM7-215ENST00000506161 KANK1Q14678 1352 aa25.81■■□□□ 1.72
PDLIM7-215ENST00000506161 TET3O43151 1660 aa25.8■■□□□ 1.72
PDLIM7-215ENST00000506161 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
PDLIM7-215ENST00000506161 GCC2Q8IWJ2 1684 aa25.8■■□□□ 1.72
PDLIM7-215ENST00000506161 MYO5BQ9ULV0 1848 aa25.79■■□□□ 1.72
PDLIM7-215ENST00000506161 ITGAEP38570 1179 aa25.78■■□□□ 1.72
PDLIM7-215ENST00000506161 NPHP4O75161 1426 aaPredicted RBP25.78■■□□□ 1.72
PDLIM7-215ENST00000506161 NOS1P29475 1434 aa25.78■■□□□ 1.72
PDLIM7-215ENST00000506161 ARHGAP23Q9P227 1491 aa25.78■■□□□ 1.72
PDLIM7-215ENST00000506161 E9PCH4 1651 aa25.77■■□□□ 1.72
PDLIM7-215ENST00000506161 ROCK1Q13464 1354 aa25.77■■□□□ 1.72
PDLIM7-215ENST00000506161 CPS1P31327 1500 aa25.77■■□□□ 1.72
PDLIM7-215ENST00000506161 ANKLE2Q86XL3 938 aa25.76■■□□□ 1.71
PDLIM7-215ENST00000506161 SLIT1O75093 1534 aa25.76■■□□□ 1.71
PDLIM7-215ENST00000506161 IQGAP3Q86VI3 1631 aa25.74■■□□□ 1.71
PDLIM7-215ENST00000506161 RRBP1Q9P2E9 1410 aaKnown RBP25.74■■□□□ 1.71
PDLIM7-215ENST00000506161 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
PDLIM7-215ENST00000506161 KDM5AP29375 1690 aaKnown RBP25.74■■□□□ 1.71
PDLIM7-215ENST00000506161 LTKP29376 864 aa25.72■■□□□ 1.71
PDLIM7-215ENST00000506161 IDI1Q13907 227 aa25.71■■□□□ 1.71
PDLIM7-215ENST00000506161 SCAF11Q99590 1463 aaKnown RBP25.7■■□□□ 1.7
PDLIM7-215ENST00000506161 ADGRB3O60242 1522 aa25.68■■□□□ 1.7
PDLIM7-215ENST00000506161 RPRD2Q5VT52 1461 aaKnown RBP25.66■■□□□ 1.7
PDLIM7-215ENST00000506161 ALKQ9UM73 1620 aa25.64■■□□□ 1.7
PDLIM7-215ENST00000506161 XIRP1Q702N8 1843 aaKnown RBP25.64■■□□□ 1.7
PDLIM7-215ENST00000506161 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
PDLIM7-215ENST00000506161 TMEM131LA2VDJ0 1609 aa25.63■■□□□ 1.69
PDLIM7-215ENST00000506161 TXNDC2Q86VQ3 553 aa25.61■■□□□ 1.69
PDLIM7-215ENST00000506161 NUP155O75694 1391 aa25.58■■□□□ 1.69
PDLIM7-215ENST00000506161 LRRC7Q96NW7 1537 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms