RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 CLGNO14967 610 aa11.91□□□□□ -0.5
HTT-203ENST00000506137 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
HTT-203ENST00000506137 SECISBP2LQ93073 1101 aaKnown RBP11.91□□□□□ -0.5
HTT-203ENST00000506137 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
HTT-203ENST00000506137 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
HTT-203ENST00000506137 PTPRMP28827 1452 aa11.89□□□□□ -0.51
HTT-203ENST00000506137 SRCAPQ6ZRS2 3230 aa11.88□□□□□ -0.51
HTT-203ENST00000506137 ERCC3P19447 782 aa11.88□□□□□ -0.51
HTT-203ENST00000506137 MAGI1Q96QZ7 1491 aaPredicted RBP11.88□□□□□ -0.51
HTT-203ENST00000506137 FLIIQ13045 1269 aa11.87□□□□□ -0.51
HTT-203ENST00000506137 SPTY2D1Q68D10 685 aaPredicted RBP11.87□□□□□ -0.51
HTT-203ENST00000506137 ZNF622Q969S3 477 aaKnown RBP eCLIP11.87□□□□□ -0.51
HTT-203ENST00000506137 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
HTT-203ENST00000506137 GORABQ5T7V8 394 aa11.86□□□□□ -0.51
HTT-203ENST00000506137 WDR70Q9NW82 654 aa11.86□□□□□ -0.51
HTT-203ENST00000506137 LAS1LQ9Y4W2 734 aaKnown RBP11.86□□□□□ -0.51
HTT-203ENST00000506137 PPRC1Q5VV67 1664 aaKnown RBP11.86□□□□□ -0.51
HTT-203ENST00000506137 OS9Q13438 667 aaPredicted RBP11.85□□□□□ -0.51
HTT-203ENST00000506137 TMTC2Q8N394 836 aa11.85□□□□□ -0.51
HTT-203ENST00000506137 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
HTT-203ENST00000506137 FAM193AP78312 1265 aa11.84□□□□□ -0.51
HTT-203ENST00000506137 BARGINQ6ZT62 677 aa11.84□□□□□ -0.51
HTT-203ENST00000506137 SLC24A3Q9HC58 644 aa11.83□□□□□ -0.52
HTT-203ENST00000506137 CEP170Q5SW79 1584 aa11.83□□□□□ -0.52
HTT-203ENST00000506137 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
HTT-203ENST00000506137 COL17A1Q9UMD9 1497 aaPredicted RBP11.83□□□□□ -0.52
HTT-203ENST00000506137 CAPN15O75808 1086 aa11.82□□□□□ -0.52
HTT-203ENST00000506137 AXDND1Q5T1B0 1012 aaPredicted RBP11.82□□□□□ -0.52
HTT-203ENST00000506137 IQSEC2Q5JU85 1478 aa11.82□□□□□ -0.52
HTT-203ENST00000506137 ABCC8Q09428 1581 aa11.81□□□□□ -0.52
HTT-203ENST00000506137 MROH2BQ7Z745 1585 aa11.81□□□□□ -0.52
HTT-203ENST00000506137 ZC3H15Q8WU90 426 aaKnown RBP11.81□□□□□ -0.52
HTT-203ENST00000506137 CALRP27797 417 aaKnown RBP11.8□□□□□ -0.52
HTT-203ENST00000506137 HSPA2P54652 639 aa11.8□□□□□ -0.52
HTT-203ENST00000506137 FAM43BQ6ZT52 329 aaPredicted RBP11.8□□□□□ -0.52
HTT-203ENST00000506137 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
HTT-203ENST00000506137 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
HTT-203ENST00000506137 RGL2O15211 777 aa11.78□□□□□ -0.52
HTT-203ENST00000506137 CNGB1Q14028 1251 aaPredicted RBP11.78□□□□□ -0.52
HTT-203ENST00000506137 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
HTT-203ENST00000506137 A6NJR5 290 aa11.77□□□□□ -0.53
HTT-203ENST00000506137 TPD52L2O43399 206 aaKnown RBP11.77□□□□□ -0.53
HTT-203ENST00000506137 ACIN1Q9UKV3 1341 aaKnown RBP11.77□□□□□ -0.53
HTT-203ENST00000506137 ADAMTSL3P82987 1691 aa11.77□□□□□ -0.53
HTT-203ENST00000506137 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
HTT-203ENST00000506137 ZC3H4Q9UPT8 1303 aaKnown RBP11.76□□□□□ -0.53
HTT-203ENST00000506137 SMARCA5O60264 1052 aaPredicted RBP11.75□□□□□ -0.53
HTT-203ENST00000506137 TRAK2O60296 914 aa11.75□□□□□ -0.53
HTT-203ENST00000506137 MCCD1P59942 119 aaPredicted RBP11.75□□□□□ -0.53
HTT-203ENST00000506137 UBA5Q9GZZ9 404 aa11.75□□□□□ -0.53
HTT-203ENST00000506137 TRIM44Q96DX7 344 aaPredicted RBP11.74□□□□□ -0.53
HTT-203ENST00000506137 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
HTT-203ENST00000506137 SERPINA10Q9UK55 444 aa11.74□□□□□ -0.53
HTT-203ENST00000506137 KIF21BO75037 1637 aa11.74□□□□□ -0.53
HTT-203ENST00000506137 SHROOM2Q13796 1616 aa11.74□□□□□ -0.53
HTT-203ENST00000506137 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
HTT-203ENST00000506137 DNMBPQ6XZF7 1577 aa11.72□□□□□ -0.53
HTT-203ENST00000506137 MARCH6O60337 910 aa11.72□□□□□ -0.53
HTT-203ENST00000506137 RALBP1Q15311 655 aa11.72□□□□□ -0.53
HTT-203ENST00000506137 CASC1Q6TDU7 716 aa11.72□□□□□ -0.53
HTT-203ENST00000506137 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
HTT-203ENST00000506137 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
HTT-203ENST00000506137 NOP58Q9Y2X3 529 aaKnown RBP11.72□□□□□ -0.53
HTT-203ENST00000506137 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.53
HTT-203ENST00000506137 CEP120Q8N960 986 aa11.71□□□□□ -0.53
HTT-203ENST00000506137 PPME1Q9Y570 386 aa11.71□□□□□ -0.53
HTT-203ENST00000506137 BRD1O95696 1058 aa11.7□□□□□ -0.54
HTT-203ENST00000506137 TSHZ1Q6ZSZ6 1077 aa11.7□□□□□ -0.54
HTT-203ENST00000506137 SPOCK2Q92563 424 aa11.7□□□□□ -0.54
HTT-203ENST00000506137 LTBP4Q8N2S1 1624 aa11.7□□□□□ -0.54
HTT-203ENST00000506137 ADCY10Q96PN6 1610 aa11.69□□□□□ -0.54
HTT-203ENST00000506137 ANKRD62A6NC57 917 aa11.69□□□□□ -0.54
HTT-203ENST00000506137 NRDCO43847 1150 aa11.69□□□□□ -0.54
HTT-203ENST00000506137 CCDC97Q96F63 343 aaPredicted RBP11.69□□□□□ -0.54
HTT-203ENST00000506137 IGSF5Q9NSI5 407 aa11.69□□□□□ -0.54
HTT-203ENST00000506137 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
HTT-203ENST00000506137 GLI2P10070 1586 aa11.68□□□□□ -0.54
HTT-203ENST00000506137 TTC36A6NLP5 189 aa11.68□□□□□ -0.54
HTT-203ENST00000506137 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
HTT-203ENST00000506137 DRC1Q96MC2 740 aa11.68□□□□□ -0.54
HTT-203ENST00000506137 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.68□□□□□ -0.54
HTT-203ENST00000506137 KCNG1Q9UIX4 513 aa11.68□□□□□ -0.54
HTT-203ENST00000506137 RETREG2Q8NC44 543 aa11.67□□□□□ -0.54
HTT-203ENST00000506137 TEX14Q8IWB6 1497 aa11.66□□□□□ -0.54
HTT-203ENST00000506137 ANP32CO43423 234 aa11.66□□□□□ -0.54
HTT-203ENST00000506137 MMP14P50281 582 aa11.66□□□□□ -0.54
HTT-203ENST00000506137 NBPF11Q86T75 865 aa11.66□□□□□ -0.54
HTT-203ENST00000506137 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
HTT-203ENST00000506137 SGSM3Q96HU1 749 aa11.65□□□□□ -0.54
HTT-203ENST00000506137 RBM27Q9P2N5 1060 aaKnown RBP11.65□□□□□ -0.54
HTT-203ENST00000506137 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
HTT-203ENST00000506137 HIRIP3Q9BW71 556 aaPredicted RBP11.64□□□□□ -0.55
HTT-203ENST00000506137 CHMP4BQ9H444 224 aaKnown RBP11.64□□□□□ -0.55
HTT-203ENST00000506137 LIG1P18858 919 aa11.63□□□□□ -0.55
HTT-203ENST00000506137 IRF5Q13568 498 aa11.63□□□□□ -0.55
HTT-203ENST00000506137 MYBPC2Q14324 1141 aa11.63□□□□□ -0.55
HTT-203ENST00000506137 MAGEC2Q9UBF1 373 aaPredicted RBP11.63□□□□□ -0.55
HTT-203ENST00000506137 PTPRTO14522 1441 aa11.62□□□□□ -0.55
HTT-203ENST00000506137 TSR1Q2NL82 804 aaKnown RBP11.62□□□□□ -0.55
HTT-203ENST00000506137 NBPF1Q3BBV0 1214 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms