RNA–Protein interactions for RNA: ENST00000505795.1

HMGN1P13-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 13, humanhuman

BASIC

Gene HMGN1P13, Length 138 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P13-201ENST00000505795 FBXW7Q969H0 707 aa9.59□□□□□ -0.87
HMGN1P13-201ENST00000505795 A0A0G2JS52 829 aa9.58□□□□□ -0.88
HMGN1P13-201ENST00000505795 CAMK2BQ13554 666 aa9.58□□□□□ -0.88
HMGN1P13-201ENST00000505795 ANKK1Q8NFD2 765 aa9.55□□□□□ -0.88
HMGN1P13-201ENST00000505795 LAPTM4BQ86VI4 370 aa9.54□□□□□ -0.88
HMGN1P13-201ENST00000505795 DPYSL4O14531 572 aa9.53□□□□□ -0.88
HMGN1P13-201ENST00000505795 BCAMP50895 628 aa9.53□□□□□ -0.88
HMGN1P13-201ENST00000505795 EPAS1Q99814 870 aa9.53□□□□□ -0.88
HMGN1P13-201ENST00000505795 KIAA1468Q9P260 1216 aa9.53□□□□□ -0.88
HMGN1P13-201ENST00000505795 SOWAHBA6NEL2 793 aa9.52□□□□□ -0.89
HMGN1P13-201ENST00000505795 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
HMGN1P13-201ENST00000505795 ITGBL1O95965 494 aaPredicted RBP9.52□□□□□ -0.89
HMGN1P13-201ENST00000505795 C6orf132Q5T0Z8 1188 aa9.52□□□□□ -0.89
HMGN1P13-201ENST00000505795 ZFRQ96KR1 1074 aaKnown RBP9.5□□□□□ -0.89
HMGN1P13-201ENST00000505795 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
HMGN1P13-201ENST00000505795 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
HMGN1P13-201ENST00000505795 IRX2Q9BZI1 471 aaPredicted RBP9.47□□□□□ -0.89
HMGN1P13-201ENST00000505795 SEPT9Q9UHD8 586 aaPredicted RBP9.47□□□□□ -0.89
HMGN1P13-201ENST00000505795 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
HMGN1P13-201ENST00000505795 DDX12PQ92771 950 aa9.46□□□□□ -0.9
HMGN1P13-201ENST00000505795 WBP1LQ9NX94 342 aa9.46□□□□□ -0.9
HMGN1P13-201ENST00000505795 FAM98CQ17RN3 349 aaKnown RBP9.44□□□□□ -0.9
HMGN1P13-201ENST00000505795 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
HMGN1P13-201ENST00000505795 PDIA6Q15084 440 aa9.42□□□□□ -0.9
HMGN1P13-201ENST00000505795 BBXQ8WY36 941 aaPredicted RBP9.42□□□□□ -0.9
HMGN1P13-201ENST00000505795 TSR1Q2NL82 804 aaKnown RBP9.41□□□□□ -0.9
HMGN1P13-201ENST00000505795 NBR1Q14596 966 aa9.4□□□□□ -0.9
HMGN1P13-201ENST00000505795 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.9
HMGN1P13-201ENST00000505795 TSR3Q9UJK0 312 aaKnown RBP9.4□□□□□ -0.9
HMGN1P13-201ENST00000505795 TSKSQ9UJT2 592 aa9.4□□□□□ -0.9
HMGN1P13-201ENST00000505795 LRCH3Q96II8 777 aa9.39□□□□□ -0.91
HMGN1P13-201ENST00000505795 MAP3K7O43318 606 aa9.38□□□□□ -0.91
HMGN1P13-201ENST00000505795 KCNC4Q03721 635 aa9.38□□□□□ -0.91
HMGN1P13-201ENST00000505795 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
HMGN1P13-201ENST00000505795 SPDYE16A6NNV3 312 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P13-201ENST00000505795 PRIM1P49642 420 aaKnown RBP9.36□□□□□ -0.91
HMGN1P13-201ENST00000505795 PACS2Q86VP3 889 aa9.36□□□□□ -0.91
HMGN1P13-201ENST00000505795 FAM198AQ9UFP1 575 aa9.34□□□□□ -0.91
HMGN1P13-201ENST00000505795 CDCA7LQ96GN5 454 aa9.33□□□□□ -0.92
HMGN1P13-201ENST00000505795 PRSS12P56730 875 aa9.32□□□□□ -0.92
HMGN1P13-201ENST00000505795 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
HMGN1P13-201ENST00000505795 ARIH1Q9Y4X5 557 aaPredicted RBP9.32□□□□□ -0.92
HMGN1P13-201ENST00000505795 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
HMGN1P13-201ENST00000505795 SMAPO00193 183 aa9.31□□□□□ -0.92
HMGN1P13-201ENST00000505795 E2F4Q16254 413 aa9.31□□□□□ -0.92
HMGN1P13-201ENST00000505795 PPP4CP60510 307 aa9.3□□□□□ -0.92
HMGN1P13-201ENST00000505795 SAMD7Q7Z3H4 446 aa9.3□□□□□ -0.92
HMGN1P13-201ENST00000505795 CERKQ8TCT0 537 aa9.3□□□□□ -0.92
HMGN1P13-201ENST00000505795 TJAP1Q5JTD0 557 aa9.28□□□□□ -0.92
HMGN1P13-201ENST00000505795 GRXCR2A6NFK2 248 aa9.27□□□□□ -0.93
HMGN1P13-201ENST00000505795 OSBPP22059 807 aa9.27□□□□□ -0.93
HMGN1P13-201ENST00000505795 TATDN2Q93075 761 aa9.27□□□□□ -0.93
HMGN1P13-201ENST00000505795 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
HMGN1P13-201ENST00000505795 Q6ZNB5 142 aa9.26□□□□□ -0.93
HMGN1P13-201ENST00000505795 NBPF26B4DH59 902 aa9.25□□□□□ -0.93
HMGN1P13-201ENST00000505795 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.25□□□□□ -0.93
HMGN1P13-201ENST00000505795 PNMA3Q9UL41 463 aa9.25□□□□□ -0.93
HMGN1P13-201ENST00000505795 MTRQ99707 1265 aa9.24□□□□□ -0.93
HMGN1P13-201ENST00000505795 NUDT18Q6ZVK8 323 aa9.22□□□□□ -0.93
HMGN1P13-201ENST00000505795 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
HMGN1P13-201ENST00000505795 LCE2BO14633 110 aa9.21□□□□□ -0.94
HMGN1P13-201ENST00000505795 TTC13Q8NBP0 860 aa9.21□□□□□ -0.94
HMGN1P13-201ENST00000505795 IL21Q9HBE4 155 aa9.21□□□□□ -0.94
HMGN1P13-201ENST00000505795 WDR70Q9NW82 654 aa9.21□□□□□ -0.94
HMGN1P13-201ENST00000505795 APLP1P51693 650 aa9.2□□□□□ -0.94
HMGN1P13-201ENST00000505795 LAPTM4AQ15012 233 aa9.2□□□□□ -0.94
HMGN1P13-201ENST00000505795 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
HMGN1P13-201ENST00000505795 ZNF516Q92618 1163 aa9.19□□□□□ -0.94
HMGN1P13-201ENST00000505795 CFAP44Q96MT7 982 aa9.19□□□□□ -0.94
HMGN1P13-201ENST00000505795 NPDC1Q9NQX5 325 aaPredicted RBP9.19□□□□□ -0.94
HMGN1P13-201ENST00000505795 PPP1R18Q6NYC8 613 aa9.18□□□□□ -0.94
HMGN1P13-201ENST00000505795 PRKD2Q9BZL6 878 aa9.18□□□□□ -0.94
HMGN1P13-201ENST00000505795 GFRA3O60609 400 aa9.17□□□□□ -0.94
HMGN1P13-201ENST00000505795 RNF40O75150 1001 aa9.17□□□□□ -0.94
HMGN1P13-201ENST00000505795 PADI6Q6TGC4 694 aa9.16□□□□□ -0.94
HMGN1P13-201ENST00000505795 HDGFP51858 240 aaKnown RBP9.15□□□□□ -0.94
HMGN1P13-201ENST00000505795 SWT1Q5T5J6 900 aaKnown RBP9.14□□□□□ -0.95
HMGN1P13-201ENST00000505795 NKX2-3Q8TAU0 364 aa9.14□□□□□ -0.95
HMGN1P13-201ENST00000505795 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.14□□□□□ -0.95
HMGN1P13-201ENST00000505795 V9GY48 417 aaPredicted RBP9.14□□□□□ -0.95
HMGN1P13-201ENST00000505795 NRG2O14511 850 aaPredicted RBP9.12□□□□□ -0.95
HMGN1P13-201ENST00000505795 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
HMGN1P13-201ENST00000505795 TRAF7Q6Q0C0 670 aa9.12□□□□□ -0.95
HMGN1P13-201ENST00000505795 SLF2Q8IX21 1173 aa9.12□□□□□ -0.95
HMGN1P13-201ENST00000505795 EYA1Q99502 592 aa9.12□□□□□ -0.95
HMGN1P13-201ENST00000505795 NECTIN2Q92692 538 aa9.11□□□□□ -0.95
HMGN1P13-201ENST00000505795 COPS2P61201 443 aa9.1□□□□□ -0.95
HMGN1P13-201ENST00000505795 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
HMGN1P13-201ENST00000505795 MLLT3P42568 568 aaPredicted RBP9.08□□□□□ -0.96
HMGN1P13-201ENST00000505795 ZPR1O75312 459 aa9.06□□□□□ -0.96
HMGN1P13-201ENST00000505795 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
HMGN1P13-201ENST00000505795 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
HMGN1P13-201ENST00000505795 GGCXP38435 758 aa9.04□□□□□ -0.96
HMGN1P13-201ENST00000505795 PTGDRQ13258 359 aa9.04□□□□□ -0.96
HMGN1P13-201ENST00000505795 PDZRN3Q9UPQ7 1066 aa9.04□□□□□ -0.96
HMGN1P13-201ENST00000505795 SLC4A3P48751 1232 aa9.03□□□□□ -0.96
HMGN1P13-201ENST00000505795 PRR14Q9BWN1 585 aa9.02□□□□□ -0.97
HMGN1P13-201ENST00000505795 PCDHB3Q9Y5E6 796 aa9.02□□□□□ -0.97
HMGN1P13-201ENST00000505795 DNAJB2P25686 324 aa9.01□□□□□ -0.97
HMGN1P13-201ENST00000505795 BLOC1S3Q6QNY0 202 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms