RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
TRAPPC11-204ENST00000505676 SCAPERQ9BY12 1400 aa24.17■■□□□ 1.46
TRAPPC11-204ENST00000505676 ZNF518AQ6AHZ1 1483 aa24.16■■□□□ 1.46
TRAPPC11-204ENST00000505676 ARID4BQ4LE39 1312 aaPredicted RBP24.15■■□□□ 1.46
TRAPPC11-204ENST00000505676 WASHC2AQ641Q2 1341 aa24.15■■□□□ 1.46
TRAPPC11-204ENST00000505676 CCDC7Q96M83 1385 aa24.13■■□□□ 1.45
TRAPPC11-204ENST00000505676 AFAP1Q8N556 730 aa24.12■■□□□ 1.45
TRAPPC11-204ENST00000505676 KANK1Q14678 1352 aa24.12■■□□□ 1.45
TRAPPC11-204ENST00000505676 CNTLNQ9NXG0 1405 aa24.12■■□□□ 1.45
TRAPPC11-204ENST00000505676 PLA2R1Q13018 1463 aa24.12■■□□□ 1.45
TRAPPC11-204ENST00000505676 CD109Q6YHK3 1445 aa24.11■■□□□ 1.45
TRAPPC11-204ENST00000505676 DHX29Q7Z478 1369 aaKnown RBP24.1■■□□□ 1.45
TRAPPC11-204ENST00000505676 KDM5CP41229 1560 aa24.1■■□□□ 1.45
TRAPPC11-204ENST00000505676 VWDEQ8N2E2 1590 aa24.1■■□□□ 1.45
TRAPPC11-204ENST00000505676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.1■■□□□ 1.45
TRAPPC11-204ENST00000505676 NEO1Q92859 1461 aa24.09■■□□□ 1.45
TRAPPC11-204ENST00000505676 USP47Q96K76 1375 aa24.09■■□□□ 1.45
TRAPPC11-204ENST00000505676 TET3O43151 1660 aa24.09■■□□□ 1.45
TRAPPC11-204ENST00000505676 PRDM15P57071 1507 aaPredicted RBP24.07■■□□□ 1.44
TRAPPC11-204ENST00000505676 STAC3Q96MF2 364 aa24.06■■□□□ 1.44
TRAPPC11-204ENST00000505676 POGZQ7Z3K3 1410 aa24.05■■□□□ 1.44
TRAPPC11-204ENST00000505676 TRPM2O94759 1503 aa24.05■■□□□ 1.44
TRAPPC11-204ENST00000505676 MLH3Q9UHC1 1453 aa24.05■■□□□ 1.44
TRAPPC11-204ENST00000505676 LAMC1P11047 1609 aa24.05■■□□□ 1.44
TRAPPC11-204ENST00000505676 NEURL4Q96JN8 1562 aa24.04■■□□□ 1.44
TRAPPC11-204ENST00000505676 PTPRTO14522 1441 aa24.04■■□□□ 1.44
TRAPPC11-204ENST00000505676 PRAG1Q86YV5 1406 aa24.04■■□□□ 1.44
TRAPPC11-204ENST00000505676 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
TRAPPC11-204ENST00000505676 DCAF11Q8TEB1 546 aa24.02■■□□□ 1.44
TRAPPC11-204ENST00000505676 ROCK2O75116 1388 aaKnown RBP24.02■■□□□ 1.44
TRAPPC11-204ENST00000505676 E9PCH4 1651 aa24.02■■□□□ 1.44
TRAPPC11-204ENST00000505676 GTF3C3Q9Y5Q9 886 aa24.01■■□□□ 1.43
TRAPPC11-204ENST00000505676 TRPM1Q7Z4N2 1603 aa24■■□□□ 1.43
TRAPPC11-204ENST00000505676 A2MP01023 1474 aa24■■□□□ 1.43
TRAPPC11-204ENST00000505676 GPRASP1Q5JY77 1395 aa24■■□□□ 1.43
TRAPPC11-204ENST00000505676 LMTK2Q8IWU2 1503 aa23.99■■□□□ 1.43
TRAPPC11-204ENST00000505676 GLI2P10070 1586 aa23.99■■□□□ 1.43
TRAPPC11-204ENST00000505676 KIF7Q2M1P5 1343 aa23.99■■□□□ 1.43
TRAPPC11-204ENST00000505676 HECW2Q9P2P5 1572 aa23.99■■□□□ 1.43
TRAPPC11-204ENST00000505676 CARD11Q9BXL7 1154 aa23.99■■□□□ 1.43
TRAPPC11-204ENST00000505676 RNF17Q9BXT8 1623 aaKnown RBP23.99■■□□□ 1.43
TRAPPC11-204ENST00000505676 SPHKAPQ2M3C7 1700 aa23.99■■□□□ 1.43
TRAPPC11-204ENST00000505676 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
TRAPPC11-204ENST00000505676 BCORL1Q5H9F3 1711 aa23.98■■□□□ 1.43
TRAPPC11-204ENST00000505676 MROH1Q8NDA8 1641 aa23.96■■□□□ 1.43
TRAPPC11-204ENST00000505676 CEP152O94986 1710 aa23.95■■□□□ 1.42
TRAPPC11-204ENST00000505676 MYT1LQ9UL68 1186 aa23.95■■□□□ 1.42
TRAPPC11-204ENST00000505676 C11orf95C9JLR9 678 aaPredicted RBP23.94■■□□□ 1.42
TRAPPC11-204ENST00000505676 MAP3K4Q9Y6R4 1608 aa23.93■■□□□ 1.42
TRAPPC11-204ENST00000505676 KIF3BO15066 747 aa23.92■■□□□ 1.42
TRAPPC11-204ENST00000505676 KDM2AQ9Y2K7 1162 aa23.92■■□□□ 1.42
TRAPPC11-204ENST00000505676 EFCAB6Q5THR3 1501 aa23.91■■□□□ 1.42
TRAPPC11-204ENST00000505676 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
TRAPPC11-204ENST00000505676 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
TRAPPC11-204ENST00000505676 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
TRAPPC11-204ENST00000505676 CLTCL1P53675 1640 aa23.86■■□□□ 1.41
TRAPPC11-204ENST00000505676 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
TRAPPC11-204ENST00000505676 FRMPD1Q5SYB0 1578 aa23.84■■□□□ 1.41
TRAPPC11-204ENST00000505676 PRKRIP1Q9H875 184 aaPredicted RBP23.84■■□□□ 1.41
TRAPPC11-204ENST00000505676 ABCA6Q8N139 1617 aa23.82■■□□□ 1.4
TRAPPC11-204ENST00000505676 MADDQ8WXG6 1647 aa23.82■■□□□ 1.4
TRAPPC11-204ENST00000505676 KTN1Q86UP2 1357 aaKnown RBP23.8■■□□□ 1.4
TRAPPC11-204ENST00000505676 RICTORQ6R327 1708 aa23.8■■□□□ 1.4
TRAPPC11-204ENST00000505676 PPRC1Q5VV67 1664 aaKnown RBP23.8■■□□□ 1.4
TRAPPC11-204ENST00000505676 ST20-MTHFSA0A0A6YYL1 179 aa23.8■■□□□ 1.4
TRAPPC11-204ENST00000505676 KIAA1210Q9ULL0 1709 aa23.79■■□□□ 1.4
TRAPPC11-204ENST00000505676 MYOM2P54296 1465 aa23.79■■□□□ 1.4
TRAPPC11-204ENST00000505676 DIP2CQ9Y2E4 1556 aa23.77■■□□□ 1.4
TRAPPC11-204ENST00000505676 CYB5RLQ6IPT4 315 aa23.76■■□□□ 1.39
TRAPPC11-204ENST00000505676 ZMYM4Q5VZL5 1548 aa23.75■■□□□ 1.39
TRAPPC11-204ENST00000505676 KIF1BO60333 1816 aa23.75■■□□□ 1.39
TRAPPC11-204ENST00000505676 DIP2BQ9P265 1576 aa23.75■■□□□ 1.39
TRAPPC11-204ENST00000505676 ZC3H13Q5T200 1668 aaKnown RBP23.75■■□□□ 1.39
TRAPPC11-204ENST00000505676 COL17A1Q9UMD9 1497 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC11-204ENST00000505676 ABCC3O15438 1527 aa23.72■■□□□ 1.39
TRAPPC11-204ENST00000505676 SLC24A1O60721 1099 aa23.72■■□□□ 1.39
TRAPPC11-204ENST00000505676 IQGAP1P46940 1657 aa23.7■■□□□ 1.38
TRAPPC11-204ENST00000505676 NBPF1Q3BBV0 1214 aa23.7■■□□□ 1.38
TRAPPC11-204ENST00000505676 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
TRAPPC11-204ENST00000505676 ADGRB3O60242 1522 aa23.69■■□□□ 1.38
TRAPPC11-204ENST00000505676 SCAF11Q99590 1463 aaKnown RBP23.69■■□□□ 1.38
TRAPPC11-204ENST00000505676 NPATQ14207 1427 aa23.68■■□□□ 1.38
TRAPPC11-204ENST00000505676 EIF3AQ14152 1382 aaKnown RBP23.68■■□□□ 1.38
TRAPPC11-204ENST00000505676 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
TRAPPC11-204ENST00000505676 CAMSAP1Q5T5Y3 1602 aa23.67■■□□□ 1.38
TRAPPC11-204ENST00000505676 TMF1P82094 1093 aa23.67■■□□□ 1.38
TRAPPC11-204ENST00000505676 WASHC2CQ9Y4E1 1318 aa23.66■■□□□ 1.38
TRAPPC11-204ENST00000505676 NRXN1Q9ULB1 1477 aa23.66■■□□□ 1.38
TRAPPC11-204ENST00000505676 REREQ9P2R6 1566 aa23.65■■□□□ 1.38
TRAPPC11-204ENST00000505676 RAPGEF3O95398 923 aa23.65■■□□□ 1.38
TRAPPC11-204ENST00000505676 TESK2Q96S53 571 aa23.65■■□□□ 1.38
TRAPPC11-204ENST00000505676 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.38
TRAPPC11-204ENST00000505676 CDCA8Q53HL2 280 aa23.64■■□□□ 1.37
TRAPPC11-204ENST00000505676 RALBP1Q15311 655 aa23.63■■□□□ 1.37
TRAPPC11-204ENST00000505676 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
TRAPPC11-204ENST00000505676 NOS1P29475 1434 aa23.63■■□□□ 1.37
TRAPPC11-204ENST00000505676 POLR3GLQ9BT43 218 aa23.63■■□□□ 1.37
TRAPPC11-204ENST00000505676 FAM69CQ0P6D2 419 aa23.62■■□□□ 1.37
TRAPPC11-204ENST00000505676 GGT6Q6P531 493 aa23.61■■□□□ 1.37
TRAPPC11-204ENST00000505676 UGGT1Q9NYU2 1555 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms