RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 WDR78Q5VTH9 848 aa6.56□□□□□ -1.36
MATR3-211ENST00000505625 KIAA1211Q6ZU35 1233 aa6.56□□□□□ -1.36
MATR3-211ENST00000505625 TRIM6-TRIM34B2RNG4 842 aa6.55□□□□□ -1.36
MATR3-211ENST00000505625 NOL8Q76FK4 1167 aaKnown RBP6.54□□□□□ -1.36
MATR3-211ENST00000505625 CARD11Q9BXL7 1154 aa6.54□□□□□ -1.36
MATR3-211ENST00000505625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.54□□□□□ -1.36
MATR3-211ENST00000505625 APPP05067 770 aa6.54□□□□□ -1.36
MATR3-211ENST00000505625 E9PSI1 815 aa6.54□□□□□ -1.36
MATR3-211ENST00000505625 MPHOSPH10O00566 681 aaKnown RBP6.54□□□□□ -1.36
MATR3-211ENST00000505625 EP400NLQ6ZTU2 488 aa6.54□□□□□ -1.36
MATR3-211ENST00000505625 TTC5Q8N0Z6 440 aa6.54□□□□□ -1.36
MATR3-211ENST00000505625 VTI1AQ96AJ9 217 aa6.54□□□□□ -1.36
MATR3-211ENST00000505625 MORC1Q86VD1 984 aa6.53□□□□□ -1.36
MATR3-211ENST00000505625 FAM69CQ0P6D2 419 aa6.53□□□□□ -1.36
MATR3-211ENST00000505625 ZFYVE27Q5T4F4 411 aa6.53□□□□□ -1.36
MATR3-211ENST00000505625 ZMYND15Q9H091 742 aa6.53□□□□□ -1.36
MATR3-211ENST00000505625 STK11IPQ8N1F8 1099 aa6.53□□□□□ -1.36
MATR3-211ENST00000505625 SPAG9O60271 1321 aaKnown RBP6.53□□□□□ -1.36
MATR3-211ENST00000505625 GPATCH3Q96I76 525 aa6.53□□□□□ -1.36
MATR3-211ENST00000505625 TPD52L1Q16890 204 aaPredicted RBP6.52□□□□□ -1.37
MATR3-211ENST00000505625 RBM42Q9BTD8 480 aaKnown RBP6.52□□□□□ -1.37
MATR3-211ENST00000505625 MCCP23508 829 aa6.52□□□□□ -1.37
MATR3-211ENST00000505625 BECN1Q14457 450 aa6.52□□□□□ -1.37
MATR3-211ENST00000505625 EIF2S2P20042 333 aaKnown RBP6.52□□□□□ -1.37
MATR3-211ENST00000505625 MATR3P43243 847 aaKnown RBP eCLIP6.52□□□□□ -1.37
MATR3-211ENST00000505625 AKAP17AQ02040 695 aaKnown RBP6.52□□□□□ -1.37
MATR3-211ENST00000505625 ADAMTS2O95450 1211 aa6.51□□□□□ -1.37
MATR3-211ENST00000505625 BIN2Q9UBW5 565 aaPredicted RBP6.51□□□□□ -1.37
MATR3-211ENST00000505625 RGS3P49796 1198 aa6.51□□□□□ -1.37
MATR3-211ENST00000505625 PDE3BQ13370 1112 aa6.51□□□□□ -1.37
MATR3-211ENST00000505625 IL27Q8NEV9 243 aa6.51□□□□□ -1.37
MATR3-211ENST00000505625 WDHD1O75717 1129 aaPredicted RBP6.51□□□□□ -1.37
MATR3-211ENST00000505625 BICDL1Q6ZP65 573 aa6.51□□□□□ -1.37
MATR3-211ENST00000505625 ODF2Q5BJF6 829 aa6.51□□□□□ -1.37
MATR3-211ENST00000505625 CDCA8Q53HL2 280 aa6.5□□□□□ -1.37
MATR3-211ENST00000505625 PCMTD1Q96MG8 357 aaPredicted RBP6.5□□□□□ -1.37
MATR3-211ENST00000505625 WASHC2CQ9Y4E1 1318 aa6.5□□□□□ -1.37
MATR3-211ENST00000505625 MIER1Q8N108 512 aa6.5□□□□□ -1.37
MATR3-211ENST00000505625 CHMP4CQ96CF2 233 aa6.5□□□□□ -1.37
MATR3-211ENST00000505625 CIZ1Q9ULV3 898 aaPredicted RBP6.5□□□□□ -1.37
MATR3-211ENST00000505625 B4GALNT3Q6L9W6 998 aa6.49□□□□□ -1.37
MATR3-211ENST00000505625 DCAF11Q8TEB1 546 aa6.49□□□□□ -1.37
MATR3-211ENST00000505625 FOSBP53539 338 aa6.49□□□□□ -1.37
MATR3-211ENST00000505625 BEGAINQ9BUH8 593 aa6.49□□□□□ -1.37
MATR3-211ENST00000505625 PRDM2Q13029 1718 aa6.49□□□□□ -1.37
MATR3-211ENST00000505625 NRDCO43847 1150 aa6.49□□□□□ -1.37
MATR3-211ENST00000505625 ARID3AQ99856 593 aa6.49□□□□□ -1.37
MATR3-211ENST00000505625 ZSCAN29Q8IWY8 852 aaPredicted RBP6.48□□□□□ -1.37
MATR3-211ENST00000505625 CAPN15O75808 1086 aa6.48□□□□□ -1.37
MATR3-211ENST00000505625 PSMD1Q99460 953 aa6.48□□□□□ -1.37
MATR3-211ENST00000505625 WASHC2AQ641Q2 1341 aa6.48□□□□□ -1.37
MATR3-211ENST00000505625 CBX1P83916 185 aa6.48□□□□□ -1.37
MATR3-211ENST00000505625 STK31Q9BXU1 1019 aa6.48□□□□□ -1.37
MATR3-211ENST00000505625 DRC1Q96MC2 740 aa6.48□□□□□ -1.37
MATR3-211ENST00000505625 DDX54Q8TDD1 881 aaKnown RBP6.47□□□□□ -1.37
MATR3-211ENST00000505625 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.47□□□□□ -1.37
MATR3-211ENST00000505625 SLKQ9H2G2 1235 aaPredicted RBP6.47□□□□□ -1.37
MATR3-211ENST00000505625 CT47A1Q5JQC4 288 aaPredicted RBP6.47□□□□□ -1.37
MATR3-211ENST00000505625 FOXD4L5Q5VV16 416 aaPredicted RBP6.46□□□□□ -1.37
MATR3-211ENST00000505625 FOXD4L4Q8WXT5 416 aaPredicted RBP6.46□□□□□ -1.37
MATR3-211ENST00000505625 GTF3C3Q9Y5Q9 886 aa6.46□□□□□ -1.37
MATR3-211ENST00000505625 AIMP1Q12904 312 aaKnown RBP6.46□□□□□ -1.37
MATR3-211ENST00000505625 ZNF526Q8TF50 670 aaPredicted RBP6.46□□□□□ -1.37
MATR3-211ENST00000505625 BAZ1BQ9UIG0 1483 aaKnown RBP6.46□□□□□ -1.37
MATR3-211ENST00000505625 PHF14O94880 888 aa6.46□□□□□ -1.38
MATR3-211ENST00000505625 SCLT1Q96NL6 688 aa6.46□□□□□ -1.38
MATR3-211ENST00000505625 CECR2Q9BXF3 1484 aa6.46□□□□□ -1.38
MATR3-211ENST00000505625 KIF3BO15066 747 aa6.46□□□□□ -1.38
MATR3-211ENST00000505625 ESCO1Q5FWF5 840 aa6.45□□□□□ -1.38
MATR3-211ENST00000505625 NFXL1Q6ZNB6 911 aa6.45□□□□□ -1.38
MATR3-211ENST00000505625 ITPRIPQ8IWB1 547 aa6.45□□□□□ -1.38
MATR3-211ENST00000505625 SYNE3Q6ZMZ3 975 aa6.45□□□□□ -1.38
MATR3-211ENST00000505625 NEBLO76041 1014 aa6.44□□□□□ -1.38
MATR3-211ENST00000505625 NLRP2Q9NX02 1062 aa6.44□□□□□ -1.38
MATR3-211ENST00000505625 CLIP1P30622 1438 aa6.44□□□□□ -1.38
MATR3-211ENST00000505625 U2AF1L5P0DN76 240 aaPredicted RBP6.44□□□□□ -1.38
MATR3-211ENST00000505625 U2AF1Q01081 240 aaKnown RBP eCLIP6.44□□□□□ -1.38
MATR3-211ENST00000505625 KIF6Q6ZMV9 814 aa6.44□□□□□ -1.38
MATR3-211ENST00000505625 TPM4P67936 248 aa6.44□□□□□ -1.38
MATR3-211ENST00000505625 OSCARQ8IYS5 282 aa6.44□□□□□ -1.38
MATR3-211ENST00000505625 ZCCHC6Q5VYS8 1495 aaKnown RBP6.44□□□□□ -1.38
MATR3-211ENST00000505625 TPM2P07951 284 aa6.44□□□□□ -1.38
MATR3-211ENST00000505625 SART3Q15020 963 aaKnown RBP6.44□□□□□ -1.38
MATR3-211ENST00000505625 BCL11BQ9C0K0 894 aaPredicted RBP6.43□□□□□ -1.38
MATR3-211ENST00000505625 EPS15P42566 896 aa6.43□□□□□ -1.38
MATR3-211ENST00000505625 PROSER2Q86WR7 435 aaPredicted RBP6.43□□□□□ -1.38
MATR3-211ENST00000505625 ZNF408Q9H9D4 720 aa6.43□□□□□ -1.38
MATR3-211ENST00000505625 SMARCA2P51531 1590 aa6.43□□□□□ -1.38
MATR3-211ENST00000505625 NGLY1Q96IV0 654 aa6.43□□□□□ -1.38
MATR3-211ENST00000505625 SF3A1Q15459 793 aaKnown RBP6.42□□□□□ -1.38
MATR3-211ENST00000505625 TEFQ10587 303 aa6.42□□□□□ -1.38
MATR3-211ENST00000505625 HSP90AB2PQ58FF8 381 aa6.42□□□□□ -1.38
MATR3-211ENST00000505625 FOXD4L6Q3SYB3 417 aaPredicted RBP6.42□□□□□ -1.38
MATR3-211ENST00000505625 FOXD4L3Q6VB84 417 aaPredicted RBP6.42□□□□□ -1.38
MATR3-211ENST00000505625 RILPL2Q969X0 211 aa6.42□□□□□ -1.38
MATR3-211ENST00000505625 CSPG5O95196 566 aa6.42□□□□□ -1.38
MATR3-211ENST00000505625 XPCQ01831 940 aaPredicted RBP6.42□□□□□ -1.38
MATR3-211ENST00000505625 MCTP1Q6DN14 999 aa6.42□□□□□ -1.38
MATR3-211ENST00000505625 ERICH2A1L162 156 aa6.42□□□□□ -1.38
MATR3-211ENST00000505625 TMF1P82094 1093 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms