RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 FAM9BQ8IZU0 186 aa26.9■■□□□ 1.9
SDHA-206ENST00000505555 UNC13BO14795 1591 aa26.88■■□□□ 1.89
SDHA-206ENST00000505555 CCDC144AA2RUR9 1427 aa26.88■■□□□ 1.89
SDHA-206ENST00000505555 PLXNC1O60486 1568 aa26.88■■□□□ 1.89
SDHA-206ENST00000505555 PLA2R1Q13018 1463 aa26.88■■□□□ 1.89
SDHA-206ENST00000505555 TRAPPC8Q9Y2L5 1435 aa26.87■■□□□ 1.89
SDHA-206ENST00000505555 NEFLP07196 543 aa26.86■■□□□ 1.89
SDHA-206ENST00000505555 ST20-MTHFSA0A0A6YYL1 179 aa26.86■■□□□ 1.89
SDHA-206ENST00000505555 DHX29Q7Z478 1369 aaKnown RBP26.85■■□□□ 1.89
SDHA-206ENST00000505555 DUOX2Q9NRD8 1548 aa26.84■■□□□ 1.89
SDHA-206ENST00000505555 AFAP1Q8N556 730 aa26.82■■□□□ 1.88
SDHA-206ENST00000505555 ABCC1P33527 1531 aa26.82■■□□□ 1.88
SDHA-206ENST00000505555 ROCK2O75116 1388 aaKnown RBP26.82■■□□□ 1.88
SDHA-206ENST00000505555 ARID4BQ4LE39 1312 aaPredicted RBP26.8■■□□□ 1.88
SDHA-206ENST00000505555 IQGAP3Q86VI3 1631 aa26.79■■□□□ 1.88
SDHA-206ENST00000505555 ERBINQ96RT1 1412 aa26.78■■□□□ 1.88
SDHA-206ENST00000505555 SPAG9O60271 1321 aaKnown RBP26.77■■□□□ 1.88
SDHA-206ENST00000505555 PRAG1Q86YV5 1406 aa26.77■■□□□ 1.88
SDHA-206ENST00000505555 NBPF1Q3BBV0 1214 aa26.77■■□□□ 1.88
SDHA-206ENST00000505555 A2MP01023 1474 aa26.74■■□□□ 1.87
SDHA-206ENST00000505555 MAGI2Q86UL8 1455 aa26.73■■□□□ 1.87
SDHA-206ENST00000505555 WDR7Q9Y4E6 1490 aa26.72■■□□□ 1.87
SDHA-206ENST00000505555 TRPM1Q7Z4N2 1603 aa26.69■■□□□ 1.86
SDHA-206ENST00000505555 IRX6P78412 446 aaPredicted RBP26.67■■□□□ 1.86
SDHA-206ENST00000505555 TSHZ2Q9NRE2 1034 aa26.67■■□□□ 1.86
SDHA-206ENST00000505555 ATP10AO60312 1499 aa26.65■■□□□ 1.86
SDHA-206ENST00000505555 ARAP3Q8WWN8 1544 aa26.65■■□□□ 1.86
SDHA-206ENST00000505555 FANCAO15360 1455 aa26.65■■□□□ 1.86
SDHA-206ENST00000505555 RTEL1-TNFRSF6BF6WH68 1400 aa26.65■■□□□ 1.86
SDHA-206ENST00000505555 ZFYVE16Q7Z3T8 1539 aa26.64■■□□□ 1.86
SDHA-206ENST00000505555 ZBED9Q6R2W3 1325 aa26.64■■□□□ 1.85
SDHA-206ENST00000505555 MYT1LQ9UL68 1186 aa26.63■■□□□ 1.85
SDHA-206ENST00000505555 GPRASP1Q5JY77 1395 aa26.61■■□□□ 1.85
SDHA-206ENST00000505555 ASXL2Q76L83 1435 aa26.59■■□□□ 1.85
SDHA-206ENST00000505555 SCAPERQ9BY12 1400 aa26.57■■□□□ 1.84
SDHA-206ENST00000505555 ABCA9Q8IUA7 1624 aa26.57■■□□□ 1.84
SDHA-206ENST00000505555 MYT1Q01538 1121 aa26.57■■□□□ 1.84
SDHA-206ENST00000505555 SENP3-EIF4A1A0A087X0R7 540 aa26.56■■□□□ 1.84
SDHA-206ENST00000505555 TMC1Q8TDI8 760 aa26.56■■□□□ 1.84
SDHA-206ENST00000505555 E9PCH4 1651 aa26.56■■□□□ 1.84
SDHA-206ENST00000505555 ADGRL1O94910 1474 aa26.55■■□□□ 1.84
SDHA-206ENST00000505555 KIF3BO15066 747 aa26.55■■□□□ 1.84
SDHA-206ENST00000505555 ATP7AQ04656 1500 aa26.55■■□□□ 1.84
SDHA-206ENST00000505555 TESK2Q96S53 571 aa26.54■■□□□ 1.84
SDHA-206ENST00000505555 PNISRQ8TF01 805 aaKnown RBP26.54■■□□□ 1.84
SDHA-206ENST00000505555 PRDM15P57071 1507 aaPredicted RBP26.52■■□□□ 1.84
SDHA-206ENST00000505555 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
SDHA-206ENST00000505555 DISP3Q9P2K9 1392 aa26.51■■□□□ 1.84
SDHA-206ENST00000505555 INO80Q9ULG1 1556 aaPredicted RBP26.5■■□□□ 1.83
SDHA-206ENST00000505555 EIF2AK4Q9P2K8 1649 aaKnown RBP26.49■■□□□ 1.83
SDHA-206ENST00000505555 RALBP1Q15311 655 aa26.49■■□□□ 1.83
SDHA-206ENST00000505555 MYBBP1AQ9BQG0 1328 aaKnown RBP26.48■■□□□ 1.83
SDHA-206ENST00000505555 LAMC1P11047 1609 aa26.48■■□□□ 1.83
SDHA-206ENST00000505555 DEPDC5O75140 1603 aa26.47■■□□□ 1.83
SDHA-206ENST00000505555 TRPM2O94759 1503 aa26.47■■□□□ 1.83
SDHA-206ENST00000505555 NPM1P06748 294 aaKnown RBP eCLIP26.47■■□□□ 1.83
SDHA-206ENST00000505555 KANK1Q14678 1352 aa26.47■■□□□ 1.83
SDHA-206ENST00000505555 PTPRTO14522 1441 aa26.47■■□□□ 1.83
SDHA-206ENST00000505555 COL17A1Q9UMD9 1497 aaPredicted RBP26.46■■□□□ 1.83
SDHA-206ENST00000505555 PER1O15534 1290 aaPredicted RBP26.46■■□□□ 1.83
SDHA-206ENST00000505555 CLTCL1P53675 1640 aa26.43■■□□□ 1.82
SDHA-206ENST00000505555 SPHKAPQ2M3C7 1700 aa26.43■■□□□ 1.82
SDHA-206ENST00000505555 KTN1Q86UP2 1357 aaKnown RBP26.42■■□□□ 1.82
SDHA-206ENST00000505555 TMF1P82094 1093 aa26.42■■□□□ 1.82
SDHA-206ENST00000505555 BRD4O60885 1362 aaPredicted RBP26.42■■□□□ 1.82
SDHA-206ENST00000505555 TET3O43151 1660 aa26.41■■□□□ 1.82
SDHA-206ENST00000505555 PANK3Q9H999 370 aa26.41■■□□□ 1.82
SDHA-206ENST00000505555 VWDEQ8N2E2 1590 aa26.4■■□□□ 1.82
SDHA-206ENST00000505555 MADDQ8WXG6 1647 aa26.4■■□□□ 1.82
SDHA-206ENST00000505555 CC2D1BQ5T0F9 858 aaKnown RBP26.39■■□□□ 1.81
SDHA-206ENST00000505555 RNF17Q9BXT8 1623 aaKnown RBP26.38■■□□□ 1.81
SDHA-206ENST00000505555 PARD3Q8TEW0 1356 aa26.38■■□□□ 1.81
SDHA-206ENST00000505555 CEP152O94986 1710 aa26.37■■□□□ 1.81
SDHA-206ENST00000505555 LRPPRCP42704 1394 aaKnown RBP26.37■■□□□ 1.81
SDHA-206ENST00000505555 SMG6Q86US8 1419 aaKnown RBP26.36■■□□□ 1.81
SDHA-206ENST00000505555 MROH1Q8NDA8 1641 aa26.36■■□□□ 1.81
SDHA-206ENST00000505555 NLRP13Q86W25 1043 aa26.35■■□□□ 1.81
SDHA-206ENST00000505555 KIDINS220Q9ULH0 1771 aa26.35■■□□□ 1.81
SDHA-206ENST00000505555 CD109Q6YHK3 1445 aa26.34■■□□□ 1.81
SDHA-206ENST00000505555 NUDCQ9Y266 331 aa26.34■■□□□ 1.81
SDHA-206ENST00000505555 UGGT1Q9NYU2 1555 aa26.33■■□□□ 1.81
SDHA-206ENST00000505555 ERICH6BQ5W0A0 696 aa26.33■■□□□ 1.81
SDHA-206ENST00000505555 ZNF518AQ6AHZ1 1483 aa26.32■■□□□ 1.8
SDHA-206ENST00000505555 PPP4R2Q9NY27 417 aa26.32■■□□□ 1.8
SDHA-206ENST00000505555 STAC3Q96MF2 364 aa26.3■■□□□ 1.8
SDHA-206ENST00000505555 WASHC2CQ9Y4E1 1318 aa26.27■■□□□ 1.8
SDHA-206ENST00000505555 IQGAP1P46940 1657 aa26.27■■□□□ 1.8
SDHA-206ENST00000505555 SCAF11Q99590 1463 aaKnown RBP26.27■■□□□ 1.8
SDHA-206ENST00000505555 SALL2Q9Y467 1007 aaPredicted RBP26.26■■□□□ 1.79
SDHA-206ENST00000505555 CFAP70Q5T0N1 1121 aa26.26■■□□□ 1.79
SDHA-206ENST00000505555 ADGRF5Q8IZF2 1346 aa26.25■■□□□ 1.79
SDHA-206ENST00000505555 B4GALNT3Q6L9W6 998 aa26.24■■□□□ 1.79
SDHA-206ENST00000505555 GGT6Q6P531 493 aa26.24■■□□□ 1.79
SDHA-206ENST00000505555 EFCAB6Q5THR3 1501 aa26.24■■□□□ 1.79
SDHA-206ENST00000505555 POGZQ7Z3K3 1410 aa26.24■■□□□ 1.79
SDHA-206ENST00000505555 RBM19Q9Y4C8 960 aaKnown RBP26.23■■□□□ 1.79
SDHA-206ENST00000505555 PPRC1Q5VV67 1664 aaKnown RBP26.23■■□□□ 1.79
SDHA-206ENST00000505555 RAPGEF3O95398 923 aa26.2■■□□□ 1.78
SDHA-206ENST00000505555 CHGAP10645 457 aaKnown RBP26.2■■□□□ 1.78
SDHA-206ENST00000505555 KNSTRNQ9Y448 316 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms