RNA–Protein interactions for RNA: ENST00000504953.5

SPOCK3-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SPOCK3, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-207ENST00000504953 TSC1Q92574 1164 aa15.68■□□□□ 0.1
SPOCK3-207ENST00000504953 GTPBP4Q9BZE4 634 aaKnown RBP15.68■□□□□ 0.1
SPOCK3-207ENST00000504953 SPDYE4A6NLX3 237 aa15.67■□□□□ 0.1
SPOCK3-207ENST00000504953 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
SPOCK3-207ENST00000504953 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
SPOCK3-207ENST00000504953 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
SPOCK3-207ENST00000504953 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.67■□□□□ 0.1
SPOCK3-207ENST00000504953 XPCQ01831 940 aaPredicted RBP15.66■□□□□ 0.1
SPOCK3-207ENST00000504953 MSNP26038 577 aaKnown RBP15.65■□□□□ 0.1
SPOCK3-207ENST00000504953 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
SPOCK3-207ENST00000504953 FAM43BQ6ZT52 329 aaPredicted RBP15.64■□□□□ 0.09
SPOCK3-207ENST00000504953 ZNF771Q7L3S4 317 aaPredicted RBP15.64■□□□□ 0.09
SPOCK3-207ENST00000504953 ATP2B3Q16720 1220 aa15.63■□□□□ 0.09
SPOCK3-207ENST00000504953 RIMBP3CA6NJZ7 1639 aa15.62■□□□□ 0.09
SPOCK3-207ENST00000504953 RIMBP3BA6NNM3 1639 aa15.62■□□□□ 0.09
SPOCK3-207ENST00000504953 RIMBP3Q9UFD9 1639 aa15.62■□□□□ 0.09
SPOCK3-207ENST00000504953 TRIM6-TRIM34B2RNG4 842 aa15.62■□□□□ 0.09
SPOCK3-207ENST00000504953 TRERF1Q96PN7 1200 aa15.62■□□□□ 0.09
SPOCK3-207ENST00000504953 TRIM34Q9BYJ4 488 aa15.62■□□□□ 0.09
SPOCK3-207ENST00000504953 FAM177BA6PVY3 158 aa15.61■□□□□ 0.09
SPOCK3-207ENST00000504953 MTERF4Q7Z6M4 381 aaKnown RBP15.61■□□□□ 0.09
SPOCK3-207ENST00000504953 PSEN1P49768 467 aa15.61■□□□□ 0.09
SPOCK3-207ENST00000504953 CFAP44Q96MT7 982 aa15.61■□□□□ 0.09
SPOCK3-207ENST00000504953 RNF123Q5XPI4 1314 aa15.6■□□□□ 0.09
SPOCK3-207ENST00000504953 TRAK2O60296 914 aa15.59■□□□□ 0.09
SPOCK3-207ENST00000504953 HSP90B1P14625 803 aaKnown RBP15.59■□□□□ 0.09
SPOCK3-207ENST00000504953 ZSCAN30Q86W11 494 aa15.58■□□□□ 0.09
SPOCK3-207ENST00000504953 TNIKQ9UKE5 1360 aa15.58■□□□□ 0.08
SPOCK3-207ENST00000504953 LOC102724159A0A0B4J2E5 919 aa15.58■□□□□ 0.08
SPOCK3-207ENST00000504953 PWP2Q15269 919 aaKnown RBP15.58■□□□□ 0.08
SPOCK3-207ENST00000504953 SMG6Q86US8 1419 aaKnown RBP15.58■□□□□ 0.08
SPOCK3-207ENST00000504953 CLGNO14967 610 aa15.57■□□□□ 0.08
SPOCK3-207ENST00000504953 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
SPOCK3-207ENST00000504953 PLIN1O60240 522 aa15.57■□□□□ 0.08
SPOCK3-207ENST00000504953 GAS2L3Q86XJ1 694 aa15.57■□□□□ 0.08
SPOCK3-207ENST00000504953 DYNC1I1O14576 645 aa15.57■□□□□ 0.08
SPOCK3-207ENST00000504953 TAF3Q5VWG9 929 aa15.56■□□□□ 0.08
SPOCK3-207ENST00000504953 DNAJC2Q99543 621 aaKnown RBP15.56■□□□□ 0.08
SPOCK3-207ENST00000504953 C8orf34Q49A92 452 aa15.55■□□□□ 0.08
SPOCK3-207ENST00000504953 RRP1P56182 461 aaKnown RBP15.55■□□□□ 0.08
SPOCK3-207ENST00000504953 PANK3Q9H999 370 aa15.54■□□□□ 0.08
SPOCK3-207ENST00000504953 MCM4P33991 863 aa15.54■□□□□ 0.08
SPOCK3-207ENST00000504953 MMP14P50281 582 aa15.54■□□□□ 0.08
SPOCK3-207ENST00000504953 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
SPOCK3-207ENST00000504953 VGFO15240 615 aaPredicted RBP15.52■□□□□ 0.08
SPOCK3-207ENST00000504953 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
SPOCK3-207ENST00000504953 TERF1P54274 439 aa15.52■□□□□ 0.07
SPOCK3-207ENST00000504953 MPNDQ8N594 471 aa15.51■□□□□ 0.07
SPOCK3-207ENST00000504953 PRKRIP1Q9H875 184 aaPredicted RBP15.5■□□□□ 0.07
SPOCK3-207ENST00000504953 BECN1Q14457 450 aa15.5■□□□□ 0.07
SPOCK3-207ENST00000504953 ZNF526Q8TF50 670 aaPredicted RBP15.5■□□□□ 0.07
SPOCK3-207ENST00000504953 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
SPOCK3-207ENST00000504953 CC2D1BQ5T0F9 858 aaKnown RBP15.49■□□□□ 0.07
SPOCK3-207ENST00000504953 MAPKBP1O60336 1514 aa15.49■□□□□ 0.07
SPOCK3-207ENST00000504953 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
SPOCK3-207ENST00000504953 CAPN2P17655 700 aa15.48■□□□□ 0.07
SPOCK3-207ENST00000504953 TMX1Q9H3N1 280 aa15.48■□□□□ 0.07
SPOCK3-207ENST00000504953 ZNF710Q8N1W2 664 aa15.47■□□□□ 0.07
SPOCK3-207ENST00000504953 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
SPOCK3-207ENST00000504953 ANTXR1Q9H6X2 564 aa15.46■□□□□ 0.06
SPOCK3-207ENST00000504953 ZNF608Q9ULD9 1512 aaPredicted RBP15.46■□□□□ 0.06
SPOCK3-207ENST00000504953 C20orf194Q5TEA3 1177 aa15.45■□□□□ 0.06
SPOCK3-207ENST00000504953 RAB3GAP2Q9H2M9 1393 aa15.45■□□□□ 0.06
SPOCK3-207ENST00000504953 SEC24BO95487 1268 aa15.44■□□□□ 0.06
SPOCK3-207ENST00000504953 ZNF622Q969S3 477 aaKnown RBP eCLIP15.44■□□□□ 0.06
SPOCK3-207ENST00000504953 CRBNQ96SW2 442 aa15.44■□□□□ 0.06
SPOCK3-207ENST00000504953 U2AF2P26368 475 aaKnown RBP eCLIP15.43■□□□□ 0.06
SPOCK3-207ENST00000504953 ERICH4A6NGS2 130 aa15.43■□□□□ 0.06
SPOCK3-207ENST00000504953 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
SPOCK3-207ENST00000504953 SASS6Q6UVJ0 657 aa15.43■□□□□ 0.06
SPOCK3-207ENST00000504953 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
SPOCK3-207ENST00000504953 PTMAP06454 111 aaKnown RBP15.42■□□□□ 0.06
SPOCK3-207ENST00000504953 NASPP49321 788 aaPredicted RBP15.42■□□□□ 0.06
SPOCK3-207ENST00000504953 RALBP1Q15311 655 aa15.42■□□□□ 0.06
SPOCK3-207ENST00000504953 RCAN3Q9UKA8 241 aa15.42■□□□□ 0.06
SPOCK3-207ENST00000504953 CCDC173Q0VFZ6 552 aa15.41■□□□□ 0.06
SPOCK3-207ENST00000504953 BANK1Q8NDB2 785 aa15.41■□□□□ 0.06
SPOCK3-207ENST00000504953 SOGA1O94964 1423 aa15.41■□□□□ 0.06
SPOCK3-207ENST00000504953 KANK4Q5T7N3 995 aaPredicted RBP15.41■□□□□ 0.06
SPOCK3-207ENST00000504953 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
SPOCK3-207ENST00000504953 TNNT3P45378 269 aaPredicted RBP15.4■□□□□ 0.06
SPOCK3-207ENST00000504953 CLIP1P30622 1438 aa15.4■□□□□ 0.06
SPOCK3-207ENST00000504953 TNNT1P13805 278 aa15.39■□□□□ 0.05
SPOCK3-207ENST00000504953 STK26Q9P289 416 aa15.39■□□□□ 0.05
SPOCK3-207ENST00000504953 TIGD1Q96MW7 591 aa15.39■□□□□ 0.05
SPOCK3-207ENST00000504953 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.38■□□□□ 0.05
SPOCK3-207ENST00000504953 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.38■□□□□ 0.05
SPOCK3-207ENST00000504953 SLC20A2Q08357 652 aa15.38■□□□□ 0.05
SPOCK3-207ENST00000504953 CCDC9Q9Y3X0 531 aaKnown RBP15.37■□□□□ 0.05
SPOCK3-207ENST00000504953 ARAP1Q96P48 1450 aa15.37■□□□□ 0.05
SPOCK3-207ENST00000504953 LMOD3Q0VAK6 560 aa15.37■□□□□ 0.05
SPOCK3-207ENST00000504953 USP19O94966 1318 aa15.36■□□□□ 0.05
SPOCK3-207ENST00000504953 PTMSP20962 102 aa15.36■□□□□ 0.05
SPOCK3-207ENST00000504953 NBPF1Q3BBV0 1214 aa15.36■□□□□ 0.05
SPOCK3-207ENST00000504953 CARD10Q9BWT7 1032 aa15.36■□□□□ 0.05
SPOCK3-207ENST00000504953 GEMIN8Q9NWZ8 242 aaKnown RBP15.36■□□□□ 0.05
SPOCK3-207ENST00000504953 IRF6O14896 467 aa15.35■□□□□ 0.05
SPOCK3-207ENST00000504953 GRIPAP1Q4V328 841 aa15.35■□□□□ 0.05
SPOCK3-207ENST00000504953 HSPA5P11021 654 aaKnown RBP15.35■□□□□ 0.05
SPOCK3-207ENST00000504953 AXDND1Q5T1B0 1012 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms