RNA–Protein interactions for RNA: ENST00000504919.1

RAPGEF6-206, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 3

Gene RAPGEF6, Length 581 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-206ENST00000504919 THSD4Q6ZMP0 1018 aa10.63□□□□□ -0.71
RAPGEF6-206ENST00000504919 WNT2BQ93097 391 aa10.63□□□□□ -0.71
RAPGEF6-206ENST00000504919 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
RAPGEF6-206ENST00000504919 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
RAPGEF6-206ENST00000504919 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
RAPGEF6-206ENST00000504919 DDX12PQ92771 950 aa10.6□□□□□ -0.71
RAPGEF6-206ENST00000504919 RBM33Q96EV2 1170 aaKnown RBP10.59□□□□□ -0.71
RAPGEF6-206ENST00000504919 CFAP44Q96MT7 982 aa10.59□□□□□ -0.71
RAPGEF6-206ENST00000504919 RABGEF1Q9UJ41 708 aa10.59□□□□□ -0.71
RAPGEF6-206ENST00000504919 C6orf132Q5T0Z8 1188 aa10.58□□□□□ -0.72
RAPGEF6-206ENST00000504919 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
RAPGEF6-206ENST00000504919 EPAS1Q99814 870 aa10.57□□□□□ -0.72
RAPGEF6-206ENST00000504919 KIAA1468Q9P260 1216 aa10.55□□□□□ -0.72
RAPGEF6-206ENST00000504919 PDIA6Q15084 440 aa10.53□□□□□ -0.72
RAPGEF6-206ENST00000504919 NBR1Q14596 966 aa10.52□□□□□ -0.73
RAPGEF6-206ENST00000504919 BCAMP50895 628 aa10.51□□□□□ -0.73
RAPGEF6-206ENST00000504919 E2F4Q16254 413 aa10.51□□□□□ -0.73
RAPGEF6-206ENST00000504919 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
RAPGEF6-206ENST00000504919 SEPT9Q9UHD8 586 aaPredicted RBP10.51□□□□□ -0.73
RAPGEF6-206ENST00000504919 ANKK1Q8NFD2 765 aa10.5□□□□□ -0.73
RAPGEF6-206ENST00000504919 TRIM6-TRIM34B2RNG4 842 aa10.49□□□□□ -0.73
RAPGEF6-206ENST00000504919 EN1Q05925 392 aaPredicted RBP10.49□□□□□ -0.73
RAPGEF6-206ENST00000504919 ZFRQ96KR1 1074 aaKnown RBP10.49□□□□□ -0.73
RAPGEF6-206ENST00000504919 MAP3K7O43318 606 aa10.48□□□□□ -0.73
RAPGEF6-206ENST00000504919 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
RAPGEF6-206ENST00000504919 ONECUT3O60422 494 aaPredicted RBP10.47□□□□□ -0.73
RAPGEF6-206ENST00000504919 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
RAPGEF6-206ENST00000504919 LAPTM4BQ86VI4 370 aa10.47□□□□□ -0.73
RAPGEF6-206ENST00000504919 WDR70Q9NW82 654 aa10.47□□□□□ -0.73
RAPGEF6-206ENST00000504919 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
RAPGEF6-206ENST00000504919 GRXCR2A6NFK2 248 aa10.45□□□□□ -0.74
RAPGEF6-206ENST00000504919 TSKSQ9UJT2 592 aa10.45□□□□□ -0.74
RAPGEF6-206ENST00000504919 IFFO2Q5TF58 517 aa10.43□□□□□ -0.74
RAPGEF6-206ENST00000504919 FAM98CQ17RN3 349 aaKnown RBP10.42□□□□□ -0.74
RAPGEF6-206ENST00000504919 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
RAPGEF6-206ENST00000504919 ARIH1Q9Y4X5 557 aaPredicted RBP10.41□□□□□ -0.74
RAPGEF6-206ENST00000504919 A0A0G2JS52 829 aa10.39□□□□□ -0.75
RAPGEF6-206ENST00000504919 SMAPO00193 183 aa10.39□□□□□ -0.75
RAPGEF6-206ENST00000504919 CDCA7LQ96GN5 454 aa10.39□□□□□ -0.75
RAPGEF6-206ENST00000504919 FAM198AQ9UFP1 575 aa10.39□□□□□ -0.75
RAPGEF6-206ENST00000504919 PACS2Q86VP3 889 aa10.38□□□□□ -0.75
RAPGEF6-206ENST00000504919 CDHR5Q9HBB8 845 aa10.38□□□□□ -0.75
RAPGEF6-206ENST00000504919 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
RAPGEF6-206ENST00000504919 HPS5Q9UPZ3 1129 aa10.37□□□□□ -0.75
RAPGEF6-206ENST00000504919 C3orf80F5H4A9 247 aa10.36□□□□□ -0.75
RAPGEF6-206ENST00000504919 ITGBL1O95965 494 aaPredicted RBP10.36□□□□□ -0.75
RAPGEF6-206ENST00000504919 OSBPP22059 807 aa10.36□□□□□ -0.75
RAPGEF6-206ENST00000504919 PRSS12P56730 875 aa10.36□□□□□ -0.75
RAPGEF6-206ENST00000504919 LRCH3Q96II8 777 aa10.36□□□□□ -0.75
RAPGEF6-206ENST00000504919 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
RAPGEF6-206ENST00000504919 TSR3Q9UJK0 312 aaKnown RBP10.34□□□□□ -0.75
RAPGEF6-206ENST00000504919 NYAP1Q6ZVC0 841 aa10.33□□□□□ -0.76
RAPGEF6-206ENST00000504919 CERKQ8TCT0 537 aa10.32□□□□□ -0.76
RAPGEF6-206ENST00000504919 SAMD7Q7Z3H4 446 aa10.31□□□□□ -0.76
RAPGEF6-206ENST00000504919 TATDN2Q93075 761 aa10.31□□□□□ -0.76
RAPGEF6-206ENST00000504919 PNMA3Q9UL41 463 aa10.31□□□□□ -0.76
RAPGEF6-206ENST00000504919 RGS20O76081 388 aa10.3□□□□□ -0.76
RAPGEF6-206ENST00000504919 KCNC4Q03721 635 aa10.29□□□□□ -0.76
RAPGEF6-206ENST00000504919 PPP4CP60510 307 aa10.28□□□□□ -0.76
RAPGEF6-206ENST00000504919 NUDT18Q6ZVK8 323 aa10.28□□□□□ -0.76
RAPGEF6-206ENST00000504919 NBPF26B4DH59 902 aa10.27□□□□□ -0.77
RAPGEF6-206ENST00000504919 NPDC1Q9NQX5 325 aaPredicted RBP10.26□□□□□ -0.77
RAPGEF6-206ENST00000504919 MLLT3P42568 568 aaPredicted RBP10.25□□□□□ -0.77
RAPGEF6-206ENST00000504919 PADI6Q6TGC4 694 aa10.25□□□□□ -0.77
RAPGEF6-206ENST00000504919 KCNV2Q8TDN2 545 aa10.25□□□□□ -0.77
RAPGEF6-206ENST00000504919 IRX2Q9BZI1 471 aaPredicted RBP10.24□□□□□ -0.77
RAPGEF6-206ENST00000504919 RNF40O75150 1001 aa10.23□□□□□ -0.77
RAPGEF6-206ENST00000504919 ARHGEF1Q92888 912 aaKnown RBP10.23□□□□□ -0.77
RAPGEF6-206ENST00000504919 RBM27Q9P2N5 1060 aaKnown RBP10.23□□□□□ -0.77
RAPGEF6-206ENST00000504919 TTC13Q8NBP0 860 aa10.21□□□□□ -0.77
RAPGEF6-206ENST00000504919 TJAP1Q5JTD0 557 aa10.2□□□□□ -0.78
RAPGEF6-206ENST00000504919 HDGFP51858 240 aaKnown RBP10.18□□□□□ -0.78
RAPGEF6-206ENST00000504919 SWT1Q5T5J6 900 aaKnown RBP10.18□□□□□ -0.78
RAPGEF6-206ENST00000504919 MTRQ99707 1265 aa10.18□□□□□ -0.78
RAPGEF6-206ENST00000504919 APLP1P51693 650 aa10.17□□□□□ -0.78
RAPGEF6-206ENST00000504919 ZNF516Q92618 1163 aa10.15□□□□□ -0.78
RAPGEF6-206ENST00000504919 EYA1Q99502 592 aa10.14□□□□□ -0.79
RAPGEF6-206ENST00000504919 PTGDRQ13258 359 aa10.13□□□□□ -0.79
RAPGEF6-206ENST00000504919 IL21Q9HBE4 155 aa10.13□□□□□ -0.79
RAPGEF6-206ENST00000504919 NUTM2FA1L443 756 aa10.1□□□□□ -0.79
RAPGEF6-206ENST00000504919 PPP1R18Q6NYC8 613 aa10.1□□□□□ -0.79
RAPGEF6-206ENST00000504919 SLF2Q8IX21 1173 aa10.1□□□□□ -0.79
RAPGEF6-206ENST00000504919 SEMA3EO15041 775 aa10.09□□□□□ -0.79
RAPGEF6-206ENST00000504919 COPS2P61201 443 aa10.09□□□□□ -0.79
RAPGEF6-206ENST00000504919 FAM161AQ3B820 660 aa10.09□□□□□ -0.79
RAPGEF6-206ENST00000504919 NKX2-3Q8TAU0 364 aa10.09□□□□□ -0.79
RAPGEF6-206ENST00000504919 P3H3Q8IVL6 736 aa10.06□□□□□ -0.8
RAPGEF6-206ENST00000504919 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
RAPGEF6-206ENST00000504919 Q6ZNB5 142 aa10.05□□□□□ -0.8
RAPGEF6-206ENST00000504919 NECTIN2Q92692 538 aa10.05□□□□□ -0.8
RAPGEF6-206ENST00000504919 PRKD2Q9BZL6 878 aa10.05□□□□□ -0.8
RAPGEF6-206ENST00000504919 RBM46Q8TBY0 533 aaKnown RBP10.04□□□□□ -0.8
RAPGEF6-206ENST00000504919 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.04□□□□□ -0.8
RAPGEF6-206ENST00000504919 DNAJB2P25686 324 aa10.03□□□□□ -0.8
RAPGEF6-206ENST00000504919 SLC4A3P48751 1232 aa10.03□□□□□ -0.8
RAPGEF6-206ENST00000504919 RCCD1A6NED2 376 aa10.02□□□□□ -0.81
RAPGEF6-206ENST00000504919 TMEM134Q9H6X4 195 aa10.02□□□□□ -0.81
RAPGEF6-206ENST00000504919 GFRA3O60609 400 aa10□□□□□ -0.81
RAPGEF6-206ENST00000504919 ZPR1O75312 459 aa10□□□□□ -0.81
RAPGEF6-206ENST00000504919 FCHSD2O94868 740 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms