RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 LHX6Q9UPM6 363 aa12.14□□□□□ -0.47
TRAPPC13-206ENST00000504751 ZDHHC16Q969W1 377 aa12.13□□□□□ -0.47
TRAPPC13-206ENST00000504751 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC13-206ENST00000504751 ADAM33Q9BZ11 813 aa12.11□□□□□ -0.47
TRAPPC13-206ENST00000504751 CCDC102AQ96A19 550 aa12.1□□□□□ -0.47
TRAPPC13-206ENST00000504751 IRF6O14896 467 aa12.09□□□□□ -0.47
TRAPPC13-206ENST00000504751 TRIM66O15016 1216 aa12.09□□□□□ -0.47
TRAPPC13-206ENST00000504751 C6orf132Q5T0Z8 1188 aa12.09□□□□□ -0.47
TRAPPC13-206ENST00000504751 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
TRAPPC13-206ENST00000504751 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC13-206ENST00000504751 PPP4R3BQ5MIZ7 849 aa12.07□□□□□ -0.48
TRAPPC13-206ENST00000504751 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
TRAPPC13-206ENST00000504751 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
TRAPPC13-206ENST00000504751 PDE4DQ08499 809 aa12.03□□□□□ -0.48
TRAPPC13-206ENST00000504751 AMHR2Q16671 573 aa12.01□□□□□ -0.49
TRAPPC13-206ENST00000504751 GPBP1L1Q9HC44 474 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC13-206ENST00000504751 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
TRAPPC13-206ENST00000504751 PADI6Q6TGC4 694 aa12□□□□□ -0.49
TRAPPC13-206ENST00000504751 COL9A1P20849 921 aa11.99□□□□□ -0.49
TRAPPC13-206ENST00000504751 TTC13Q8NBP0 860 aa11.99□□□□□ -0.49
TRAPPC13-206ENST00000504751 ST18O60284 1047 aa11.98□□□□□ -0.49
TRAPPC13-206ENST00000504751 TMEM132AQ24JP5 1023 aa11.98□□□□□ -0.49
TRAPPC13-206ENST00000504751 KDM4CQ9H3R0 1056 aa11.97□□□□□ -0.49
TRAPPC13-206ENST00000504751 PTPREP23469 700 aa11.96□□□□□ -0.49
TRAPPC13-206ENST00000504751 PRSS12P56730 875 aa11.96□□□□□ -0.49
TRAPPC13-206ENST00000504751 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
TRAPPC13-206ENST00000504751 PARP9Q8IXQ6 854 aa11.95□□□□□ -0.5
TRAPPC13-206ENST00000504751 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
TRAPPC13-206ENST00000504751 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
TRAPPC13-206ENST00000504751 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
TRAPPC13-206ENST00000504751 ADGRG1Q9Y653 693 aa11.94□□□□□ -0.5
TRAPPC13-206ENST00000504751 VARS2Q5ST30 1063 aaKnown RBP11.92□□□□□ -0.5
TRAPPC13-206ENST00000504751 METTL3Q86U44 580 aaKnown RBP11.92□□□□□ -0.5
TRAPPC13-206ENST00000504751 FAM198AQ9UFP1 575 aa11.92□□□□□ -0.5
TRAPPC13-206ENST00000504751 ERBB3P21860 1342 aa11.91□□□□□ -0.5
TRAPPC13-206ENST00000504751 EMP3P54852 163 aa11.91□□□□□ -0.5
TRAPPC13-206ENST00000504751 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
TRAPPC13-206ENST00000504751 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
TRAPPC13-206ENST00000504751 OATP04181 439 aa11.89□□□□□ -0.51
TRAPPC13-206ENST00000504751 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC13-206ENST00000504751 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
TRAPPC13-206ENST00000504751 TSKSQ9UJT2 592 aa11.89□□□□□ -0.51
TRAPPC13-206ENST00000504751 LCE2DQ5TA82 110 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC13-206ENST00000504751 POTEEQ6S8J3 1075 aa11.87□□□□□ -0.51
TRAPPC13-206ENST00000504751 TMUB1Q9BVT8 246 aa11.87□□□□□ -0.51
TRAPPC13-206ENST00000504751 REPIN1Q9BWE0 567 aaKnown RBP11.87□□□□□ -0.51
TRAPPC13-206ENST00000504751 TRIM6-TRIM34B2RNG4 842 aa11.86□□□□□ -0.51
TRAPPC13-206ENST00000504751 GIGYF2Q6Y7W6 1299 aaKnown RBP11.86□□□□□ -0.51
TRAPPC13-206ENST00000504751 C3orf80F5H4A9 247 aa11.85□□□□□ -0.51
TRAPPC13-206ENST00000504751 MDM2Q00987 491 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC13-206ENST00000504751 CLCN1P35523 988 aa11.84□□□□□ -0.51
TRAPPC13-206ENST00000504751 PSEN2P49810 448 aa11.84□□□□□ -0.51
TRAPPC13-206ENST00000504751 PROX2Q3B8N5 592 aa11.84□□□□□ -0.51
TRAPPC13-206ENST00000504751 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
TRAPPC13-206ENST00000504751 FAM163AQ96GL9 167 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC13-206ENST00000504751 KCNH8Q96L42 1107 aa11.84□□□□□ -0.51
TRAPPC13-206ENST00000504751 ZBED2Q9BTP6 218 aa11.84□□□□□ -0.51
TRAPPC13-206ENST00000504751 FAM117AQ9C073 453 aa11.84□□□□□ -0.51
TRAPPC13-206ENST00000504751 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
TRAPPC13-206ENST00000504751 EYA1Q99502 592 aa11.83□□□□□ -0.52
TRAPPC13-206ENST00000504751 GPCPD1Q9NPB8 672 aa11.83□□□□□ -0.52
TRAPPC13-206ENST00000504751 FAM205CA6NFA0 338 aa11.82□□□□□ -0.52
TRAPPC13-206ENST00000504751 ARHGAP33O14559 1287 aa11.82□□□□□ -0.52
TRAPPC13-206ENST00000504751 IL27Q8NEV9 243 aa11.82□□□□□ -0.52
TRAPPC13-206ENST00000504751 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
TRAPPC13-206ENST00000504751 NBPF26B4DH59 902 aa11.81□□□□□ -0.52
TRAPPC13-206ENST00000504751 MS4A1P11836 297 aa11.81□□□□□ -0.52
TRAPPC13-206ENST00000504751 PBX2P40425 430 aa11.81□□□□□ -0.52
TRAPPC13-206ENST00000504751 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
TRAPPC13-206ENST00000504751 PLEKHG3A1L390 1219 aa11.8□□□□□ -0.52
TRAPPC13-206ENST00000504751 ZNF687Q8N1G0 1237 aa11.8□□□□□ -0.52
TRAPPC13-206ENST00000504751 AXIN2Q9Y2T1 843 aa11.8□□□□□ -0.52
TRAPPC13-206ENST00000504751 ONECUT3O60422 494 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC13-206ENST00000504751 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
TRAPPC13-206ENST00000504751 NUDT18Q6ZVK8 323 aa11.79□□□□□ -0.52
TRAPPC13-206ENST00000504751 PACS2Q86VP3 889 aa11.79□□□□□ -0.52
TRAPPC13-206ENST00000504751 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
TRAPPC13-206ENST00000504751 TATDN2Q93075 761 aa11.78□□□□□ -0.52
TRAPPC13-206ENST00000504751 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
TRAPPC13-206ENST00000504751 SLC4A5Q9BY07 1137 aa11.78□□□□□ -0.52
TRAPPC13-206ENST00000504751 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC13-206ENST00000504751 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
TRAPPC13-206ENST00000504751 RCCD1A6NED2 376 aa11.77□□□□□ -0.53
TRAPPC13-206ENST00000504751 FAM217BQ9NTX9 383 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC13-206ENST00000504751 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
TRAPPC13-206ENST00000504751 KIAA1468Q9P260 1216 aa11.76□□□□□ -0.53
TRAPPC13-206ENST00000504751 SMAPO00193 183 aa11.74□□□□□ -0.53
TRAPPC13-206ENST00000504751 RABGEF1Q9UJ41 708 aa11.74□□□□□ -0.53
TRAPPC13-206ENST00000504751 DNAJB2P25686 324 aa11.73□□□□□ -0.53
TRAPPC13-206ENST00000504751 SSTR3P32745 418 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC13-206ENST00000504751 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
TRAPPC13-206ENST00000504751 TMEM134Q9H6X4 195 aa11.72□□□□□ -0.53
TRAPPC13-206ENST00000504751 VPS9D1Q9Y2B5 631 aa11.72□□□□□ -0.53
TRAPPC13-206ENST00000504751 BEGAINQ9BUH8 593 aa11.68□□□□□ -0.54
TRAPPC13-206ENST00000504751 SEPT9Q9UHD8 586 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC13-206ENST00000504751 TK2O00142 265 aa11.66□□□□□ -0.54
TRAPPC13-206ENST00000504751 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAPPC13-206ENST00000504751 GOPCQ9HD26 462 aa11.65□□□□□ -0.54
TRAPPC13-206ENST00000504751 BHMG1C9JSJ3 638 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC13-206ENST00000504751 FAM98CQ17RN3 349 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms