RNA–Protein interactions for RNA: ENST00000504496.5

KLHL3-205, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 1,832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-205ENST00000504496 ZNF644Q9H582 1327 aaPredicted RBP9.35□□□□□ -0.91
KLHL3-205ENST00000504496 CCDC7Q96M83 1385 aa9.35□□□□□ -0.91
KLHL3-205ENST00000504496 FAM9BQ8IZU0 186 aa9.35□□□□□ -0.91
KLHL3-205ENST00000504496 L3MBTL2Q969R5 705 aa9.35□□□□□ -0.91
KLHL3-205ENST00000504496 PLCH2O75038 1416 aa9.35□□□□□ -0.91
KLHL3-205ENST00000504496 SYCP2Q9BX26 1530 aa9.34□□□□□ -0.91
KLHL3-205ENST00000504496 NCOA1Q15788 1441 aa9.34□□□□□ -0.91
KLHL3-205ENST00000504496 PLEKHH2Q8IVE3 1493 aa9.34□□□□□ -0.91
KLHL3-205ENST00000504496 MBD5Q9P267 1494 aa9.34□□□□□ -0.91
KLHL3-205ENST00000504496 ABCC1P33527 1531 aa9.33□□□□□ -0.92
KLHL3-205ENST00000504496 CCDC184Q52MB2 194 aa9.33□□□□□ -0.92
KLHL3-205ENST00000504496 MRS2Q9HD23 443 aa9.33□□□□□ -0.92
KLHL3-205ENST00000504496 MAST1Q9Y2H9 1570 aa9.33□□□□□ -0.92
KLHL3-205ENST00000504496 CCDC141Q6ZP82 1450 aa9.33□□□□□ -0.92
KLHL3-205ENST00000504496 PPP4R2Q9NY27 417 aa9.33□□□□□ -0.92
KLHL3-205ENST00000504496 ERICH6BQ5W0A0 696 aa9.32□□□□□ -0.92
KLHL3-205ENST00000504496 KIAA1107Q9UPP5 1409 aa9.31□□□□□ -0.92
KLHL3-205ENST00000504496 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
KLHL3-205ENST00000504496 PRKRIP1Q9H875 184 aaPredicted RBP9.31□□□□□ -0.92
KLHL3-205ENST00000504496 ZNF777Q9ULD5 760 aaPredicted RBP9.31□□□□□ -0.92
KLHL3-205ENST00000504496 RPRD2Q5VT52 1461 aaKnown RBP9.31□□□□□ -0.92
KLHL3-205ENST00000504496 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
KLHL3-205ENST00000504496 C9orf84Q5VXU9 1444 aa9.31□□□□□ -0.92
KLHL3-205ENST00000504496 TEX14Q8IWB6 1497 aa9.31□□□□□ -0.92
KLHL3-205ENST00000504496 NPM1P06748 294 aaKnown RBP eCLIP9.31□□□□□ -0.92
KLHL3-205ENST00000504496 CFAP74Q9C0B2 1584 aa9.3□□□□□ -0.92
KLHL3-205ENST00000504496 NBPF8Q3BBV2 869 aa9.3□□□□□ -0.92
KLHL3-205ENST00000504496 PLXNC1O60486 1568 aa9.3□□□□□ -0.92
KLHL3-205ENST00000504496 ANKRD30BQ9BXX2 1392 aa9.3□□□□□ -0.92
KLHL3-205ENST00000504496 BCL11AQ9H165 835 aa9.29□□□□□ -0.92
KLHL3-205ENST00000504496 ZBED9Q6R2W3 1325 aa9.29□□□□□ -0.92
KLHL3-205ENST00000504496 ARHGEF12Q9NZN5 1544 aa9.29□□□□□ -0.92
KLHL3-205ENST00000504496 KIF7Q2M1P5 1343 aa9.28□□□□□ -0.92
KLHL3-205ENST00000504496 FANCAO15360 1455 aa9.28□□□□□ -0.92
KLHL3-205ENST00000504496 MAP3K4Q9Y6R4 1608 aa9.28□□□□□ -0.92
KLHL3-205ENST00000504496 CNGB1Q14028 1251 aaPredicted RBP9.28□□□□□ -0.92
KLHL3-205ENST00000504496 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
KLHL3-205ENST00000504496 ANKRD30AQ9BXX3 1397 aa9.28□□□□□ -0.92
KLHL3-205ENST00000504496 GLI2P10070 1586 aa9.28□□□□□ -0.92
KLHL3-205ENST00000504496 RSPH4AQ5TD94 716 aa9.27□□□□□ -0.93
KLHL3-205ENST00000504496 B4GALNT3Q6L9W6 998 aa9.27□□□□□ -0.93
KLHL3-205ENST00000504496 POLR3GLQ9BT43 218 aa9.27□□□□□ -0.93
KLHL3-205ENST00000504496 EFCAB2Q5VUJ9 269 aa9.26□□□□□ -0.93
KLHL3-205ENST00000504496 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
KLHL3-205ENST00000504496 DIP2BQ9P265 1576 aa9.26□□□□□ -0.93
KLHL3-205ENST00000504496 INO80Q9ULG1 1556 aaPredicted RBP9.26□□□□□ -0.93
KLHL3-205ENST00000504496 ZFYVE16Q7Z3T8 1539 aa9.26□□□□□ -0.93
KLHL3-205ENST00000504496 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
KLHL3-205ENST00000504496 HNRNPMP52272 730 aaKnown RBP eCLIP9.25□□□□□ -0.93
KLHL3-205ENST00000504496 ADGRL1O94910 1474 aa9.25□□□□□ -0.93
KLHL3-205ENST00000504496 SPATA31E1Q6ZUB1 1445 aa9.25□□□□□ -0.93
KLHL3-205ENST00000504496 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
KLHL3-205ENST00000504496 PZPP20742 1482 aa9.24□□□□□ -0.93
KLHL3-205ENST00000504496 ANKRD50Q9ULJ7 1429 aa9.24□□□□□ -0.93
KLHL3-205ENST00000504496 BCORL1Q5H9F3 1711 aa9.24□□□□□ -0.93
KLHL3-205ENST00000504496 TSPY4P0CV99 314 aa9.24□□□□□ -0.93
KLHL3-205ENST00000504496 TSPY10P0CW01 314 aa9.24□□□□□ -0.93
KLHL3-205ENST00000504496 KDM5DQ9BY66 1539 aa9.23□□□□□ -0.93
KLHL3-205ENST00000504496 CD109Q6YHK3 1445 aa9.23□□□□□ -0.93
KLHL3-205ENST00000504496 TRAPPC8Q9Y2L5 1435 aa9.23□□□□□ -0.93
KLHL3-205ENST00000504496 KIF15Q9NS87 1388 aa9.23□□□□□ -0.93
KLHL3-205ENST00000504496 UNC13BO14795 1591 aa9.22□□□□□ -0.93
KLHL3-205ENST00000504496 DUOX2Q9NRD8 1548 aa9.22□□□□□ -0.93
KLHL3-205ENST00000504496 NEO1Q92859 1461 aa9.22□□□□□ -0.93
KLHL3-205ENST00000504496 SMG6Q86US8 1419 aaKnown RBP9.22□□□□□ -0.93
KLHL3-205ENST00000504496 KDM5CP41229 1560 aa9.22□□□□□ -0.93
KLHL3-205ENST00000504496 USP47Q96K76 1375 aa9.22□□□□□ -0.93
KLHL3-205ENST00000504496 ATP7AQ04656 1500 aa9.22□□□□□ -0.93
KLHL3-205ENST00000504496 RTEL1-TNFRSF6BF6WH68 1400 aa9.21□□□□□ -0.93
KLHL3-205ENST00000504496 KIF13AQ9H1H9 1805 aa9.21□□□□□ -0.94
KLHL3-205ENST00000504496 PPRC1Q5VV67 1664 aaKnown RBP9.21□□□□□ -0.94
KLHL3-205ENST00000504496 ERBINQ96RT1 1412 aa9.2□□□□□ -0.94
KLHL3-205ENST00000504496 NUDCQ9Y266 331 aa9.2□□□□□ -0.94
KLHL3-205ENST00000504496 DHX29Q7Z478 1369 aaKnown RBP9.2□□□□□ -0.94
KLHL3-205ENST00000504496 ZNF518AQ6AHZ1 1483 aa9.2□□□□□ -0.94
KLHL3-205ENST00000504496 POGZQ7Z3K3 1410 aa9.2□□□□□ -0.94
KLHL3-205ENST00000504496 SCAPERQ9BY12 1400 aa9.2□□□□□ -0.94
KLHL3-205ENST00000504496 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
KLHL3-205ENST00000504496 KIDINS220Q9ULH0 1771 aa9.19□□□□□ -0.94
KLHL3-205ENST00000504496 MAGI2Q86UL8 1455 aa9.19□□□□□ -0.94
KLHL3-205ENST00000504496 EIF2AK4Q9P2K8 1649 aaKnown RBP9.19□□□□□ -0.94
KLHL3-205ENST00000504496 RICTORQ6R327 1708 aa9.19□□□□□ -0.94
KLHL3-205ENST00000504496 HECW2Q9P2P5 1572 aa9.18□□□□□ -0.94
KLHL3-205ENST00000504496 DEPDC5O75140 1603 aa9.18□□□□□ -0.94
KLHL3-205ENST00000504496 IQGAP3Q86VI3 1631 aa9.18□□□□□ -0.94
KLHL3-205ENST00000504496 SENP3-EIF4A1A0A087X0R7 540 aa9.18□□□□□ -0.94
KLHL3-205ENST00000504496 PKD2Q13563 968 aa9.18□□□□□ -0.94
KLHL3-205ENST00000504496 CCDC136Q96JN2 1154 aa9.17□□□□□ -0.94
KLHL3-205ENST00000504496 CAPN15O75808 1086 aa9.17□□□□□ -0.94
KLHL3-205ENST00000504496 TSPOAP1O95153 1857 aa9.16□□□□□ -0.94
KLHL3-205ENST00000504496 SPAG9O60271 1321 aaKnown RBP9.16□□□□□ -0.94
KLHL3-205ENST00000504496 RALGAPBQ86X10 1494 aa9.16□□□□□ -0.94
KLHL3-205ENST00000504496 TMC1Q8TDI8 760 aa9.16□□□□□ -0.94
KLHL3-205ENST00000504496 MYT1LQ9UL68 1186 aa9.16□□□□□ -0.94
KLHL3-205ENST00000504496 NOP58Q9Y2X3 529 aaKnown RBP9.16□□□□□ -0.94
KLHL3-205ENST00000504496 FAM135AQ9P2D6 1515 aa9.16□□□□□ -0.94
KLHL3-205ENST00000504496 ARID4BQ4LE39 1312 aaPredicted RBP9.16□□□□□ -0.94
KLHL3-205ENST00000504496 MLH3Q9UHC1 1453 aa9.16□□□□□ -0.94
KLHL3-205ENST00000504496 ROCK2O75116 1388 aaKnown RBP9.15□□□□□ -0.94
KLHL3-205ENST00000504496 AFAP1Q8N556 730 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms