RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 ZMYND10O75800 440 aa13.7□□□□□ -0.22
UBE2B-204ENST00000504431 FCHSD2O94868 740 aa13.7□□□□□ -0.22
UBE2B-204ENST00000504431 LHX6Q9UPM6 363 aa13.7□□□□□ -0.22
UBE2B-204ENST00000504431 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
UBE2B-204ENST00000504431 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
UBE2B-204ENST00000504431 HIC1Q14526 733 aa13.66□□□□□ -0.22
UBE2B-204ENST00000504431 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
UBE2B-204ENST00000504431 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
UBE2B-204ENST00000504431 PRIM1P49642 420 aaKnown RBP13.64□□□□□ -0.23
UBE2B-204ENST00000504431 CERKQ8TCT0 537 aa13.64□□□□□ -0.23
UBE2B-204ENST00000504431 GPR37O15354 613 aa13.63□□□□□ -0.23
UBE2B-204ENST00000504431 KRI1Q8N9T8 703 aaKnown RBP13.63□□□□□ -0.23
UBE2B-204ENST00000504431 GNPATO15228 680 aa13.62□□□□□ -0.23
UBE2B-204ENST00000504431 PTGDRQ13258 359 aa13.62□□□□□ -0.23
UBE2B-204ENST00000504431 ST18O60284 1047 aa13.61□□□□□ -0.23
UBE2B-204ENST00000504431 BAZ1AQ9NRL2 1556 aaPredicted RBP13.61□□□□□ -0.23
UBE2B-204ENST00000504431 C6orf132Q5T0Z8 1188 aa13.6□□□□□ -0.23
UBE2B-204ENST00000504431 ADAM33Q9BZ11 813 aa13.6□□□□□ -0.23
UBE2B-204ENST00000504431 TSR1Q2NL82 804 aaKnown RBP13.59□□□□□ -0.23
UBE2B-204ENST00000504431 KCNH8Q96L42 1107 aa13.59□□□□□ -0.23
UBE2B-204ENST00000504431 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
UBE2B-204ENST00000504431 ERBB3P21860 1342 aa13.59□□□□□ -0.23
UBE2B-204ENST00000504431 EMP3P54852 163 aa13.58□□□□□ -0.24
UBE2B-204ENST00000504431 CDHR5Q9HBB8 845 aa13.58□□□□□ -0.24
UBE2B-204ENST00000504431 ATAD2BQ9ULI0 1458 aa13.57□□□□□ -0.24
UBE2B-204ENST00000504431 PTPREP23469 700 aa13.57□□□□□ -0.24
UBE2B-204ENST00000504431 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
UBE2B-204ENST00000504431 MAP2K5Q13163 448 aa13.56□□□□□ -0.24
UBE2B-204ENST00000504431 MINK1Q8N4C8 1332 aaPredicted RBP13.56□□□□□ -0.24
UBE2B-204ENST00000504431 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
UBE2B-204ENST00000504431 AK7Q96M32 723 aa13.55□□□□□ -0.24
UBE2B-204ENST00000504431 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
UBE2B-204ENST00000504431 NPDC1Q9NQX5 325 aaPredicted RBP13.53□□□□□ -0.24
UBE2B-204ENST00000504431 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
UBE2B-204ENST00000504431 WIZO95785 1651 aa13.52□□□□□ -0.25
UBE2B-204ENST00000504431 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
UBE2B-204ENST00000504431 PPP1R3GB7ZBB8 358 aa13.51□□□□□ -0.25
UBE2B-204ENST00000504431 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
UBE2B-204ENST00000504431 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
UBE2B-204ENST00000504431 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
UBE2B-204ENST00000504431 IRF6O14896 467 aa13.47□□□□□ -0.25
UBE2B-204ENST00000504431 PBX2P40425 430 aa13.47□□□□□ -0.25
UBE2B-204ENST00000504431 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
UBE2B-204ENST00000504431 PRSS12P56730 875 aa13.46□□□□□ -0.25
UBE2B-204ENST00000504431 CCDC102AQ96A19 550 aa13.46□□□□□ -0.25
UBE2B-204ENST00000504431 KCNK17Q96T54 332 aa13.46□□□□□ -0.25
UBE2B-204ENST00000504431 FAM205CA6NFA0 338 aa13.45□□□□□ -0.26
UBE2B-204ENST00000504431 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
UBE2B-204ENST00000504431 FECHP22830 423 aa13.44□□□□□ -0.26
UBE2B-204ENST00000504431 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
UBE2B-204ENST00000504431 ARHGAP33O14559 1287 aa13.43□□□□□ -0.26
UBE2B-204ENST00000504431 ZNF687Q8N1G0 1237 aa13.43□□□□□ -0.26
UBE2B-204ENST00000504431 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
UBE2B-204ENST00000504431 COL9A1P20849 921 aa13.42□□□□□ -0.26
UBE2B-204ENST00000504431 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
UBE2B-204ENST00000504431 HS3ST6Q96QI5 342 aa13.41□□□□□ -0.26
UBE2B-204ENST00000504431 TRIM66O15016 1216 aa13.4□□□□□ -0.26
UBE2B-204ENST00000504431 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
UBE2B-204ENST00000504431 OATP04181 439 aa13.4□□□□□ -0.26
UBE2B-204ENST00000504431 TTC13Q8NBP0 860 aa13.4□□□□□ -0.26
UBE2B-204ENST00000504431 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
UBE2B-204ENST00000504431 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
UBE2B-204ENST00000504431 NBPF26B4DH59 902 aa13.37□□□□□ -0.27
UBE2B-204ENST00000504431 PACS2Q86VP3 889 aa13.37□□□□□ -0.27
UBE2B-204ENST00000504431 PDE4DQ08499 809 aa13.36□□□□□ -0.27
UBE2B-204ENST00000504431 AMHR2Q16671 573 aa13.36□□□□□ -0.27
UBE2B-204ENST00000504431 LCE2DQ5TA82 110 aaPredicted RBP13.36□□□□□ -0.27
UBE2B-204ENST00000504431 RBM46Q8TBY0 533 aaKnown RBP13.36□□□□□ -0.27
UBE2B-204ENST00000504431 SLC4A5Q9BY07 1137 aa13.36□□□□□ -0.27
UBE2B-204ENST00000504431 PSEN2P49810 448 aa13.35□□□□□ -0.27
UBE2B-204ENST00000504431 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
UBE2B-204ENST00000504431 ZBED2Q9BTP6 218 aa13.35□□□□□ -0.27
UBE2B-204ENST00000504431 ADGRG1Q9Y653 693 aa13.35□□□□□ -0.27
UBE2B-204ENST00000504431 SUPT5HO00267 1087 aaKnown RBP13.34□□□□□ -0.27
UBE2B-204ENST00000504431 METTL3Q86U44 580 aaKnown RBP13.32□□□□□ -0.28
UBE2B-204ENST00000504431 DAXXQ9UER7 740 aaPredicted RBP13.32□□□□□ -0.28
UBE2B-204ENST00000504431 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
UBE2B-204ENST00000504431 NESP48681 1621 aa13.31□□□□□ -0.28
UBE2B-204ENST00000504431 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
UBE2B-204ENST00000504431 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
UBE2B-204ENST00000504431 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
UBE2B-204ENST00000504431 CLCN1P35523 988 aa13.29□□□□□ -0.28
UBE2B-204ENST00000504431 PROX2Q3B8N5 592 aa13.29□□□□□ -0.28
UBE2B-204ENST00000504431 POTEEQ6S8J3 1075 aa13.29□□□□□ -0.28
UBE2B-204ENST00000504431 RABGEF1Q9UJ41 708 aa13.29□□□□□ -0.28
UBE2B-204ENST00000504431 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
UBE2B-204ENST00000504431 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
UBE2B-204ENST00000504431 PNMA3Q9UL41 463 aa13.28□□□□□ -0.28
UBE2B-204ENST00000504431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.27□□□□□ -0.29
UBE2B-204ENST00000504431 TK2O00142 265 aa13.27□□□□□ -0.29
UBE2B-204ENST00000504431 DMRTA1Q5VZB9 504 aa13.27□□□□□ -0.29
UBE2B-204ENST00000504431 TATDN2Q93075 761 aa13.27□□□□□ -0.29
UBE2B-204ENST00000504431 POTEB3A0JP26 581 aa13.26□□□□□ -0.29
UBE2B-204ENST00000504431 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
UBE2B-204ENST00000504431 POTEBQ6S5H4 581 aa13.26□□□□□ -0.29
UBE2B-204ENST00000504431 NUDT18Q6ZVK8 323 aa13.26□□□□□ -0.29
UBE2B-204ENST00000504431 KIAA1468Q9P260 1216 aa13.26□□□□□ -0.29
UBE2B-204ENST00000504431 GPCPD1Q9NPB8 672 aa13.25□□□□□ -0.29
UBE2B-204ENST00000504431 PARP9Q8IXQ6 854 aa13.24□□□□□ -0.29
UBE2B-204ENST00000504431 EYA1Q99502 592 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms