RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ZNF518AQ6AHZ1 1483 aa30.11■■■□□ 2.41
UBE2D3-216ENST00000503742 SPATA31E1Q6ZUB1 1445 aa30.09■■■□□ 2.41
UBE2D3-216ENST00000503742 KIDINS220Q9ULH0 1771 aa30.09■■■□□ 2.41
UBE2D3-216ENST00000503742 CCDC144AA2RUR9 1427 aa30.09■■■□□ 2.41
UBE2D3-216ENST00000503742 EIF2AK4Q9P2K8 1649 aaKnown RBP30.08■■■□□ 2.41
UBE2D3-216ENST00000503742 DHX29Q7Z478 1369 aaKnown RBP30.06■■■□□ 2.4
UBE2D3-216ENST00000503742 KDM5CP41229 1560 aa30.06■■■□□ 2.4
UBE2D3-216ENST00000503742 YTHDC1Q96MU7 727 aaKnown RBP30.04■■■□□ 2.4
UBE2D3-216ENST00000503742 POGZQ7Z3K3 1410 aa30.04■■■□□ 2.4
UBE2D3-216ENST00000503742 CYB5RLQ6IPT4 315 aa30.04■■■□□ 2.4
UBE2D3-216ENST00000503742 VWDEQ8N2E2 1590 aa30.03■■■□□ 2.4
UBE2D3-216ENST00000503742 WASHC2AQ641Q2 1341 aa30.03■■■□□ 2.4
UBE2D3-216ENST00000503742 NEO1Q92859 1461 aa30.02■■■□□ 2.4
UBE2D3-216ENST00000503742 RALGAPBQ86X10 1494 aa30.02■■■□□ 2.4
UBE2D3-216ENST00000503742 E9PCH4 1651 aa30.01■■■□□ 2.39
UBE2D3-216ENST00000503742 MLH3Q9UHC1 1453 aa29.98■■■□□ 2.39
UBE2D3-216ENST00000503742 MAP3K4Q9Y6R4 1608 aa29.98■■■□□ 2.39
UBE2D3-216ENST00000503742 PRDM15P57071 1507 aaPredicted RBP29.98■■■□□ 2.39
UBE2D3-216ENST00000503742 MROH1Q8NDA8 1641 aa29.98■■■□□ 2.39
UBE2D3-216ENST00000503742 TET3O43151 1660 aa29.98■■■□□ 2.39
UBE2D3-216ENST00000503742 MYT1LQ9UL68 1186 aa29.97■■■□□ 2.39
UBE2D3-216ENST00000503742 GLI2P10070 1586 aa29.97■■■□□ 2.39
UBE2D3-216ENST00000503742 ZNF326Q5BKZ1 582 aaKnown RBP29.95■■■□□ 2.39
UBE2D3-216ENST00000503742 POLR1AO95602 1720 aaPredicted RBP29.95■■■□□ 2.39
UBE2D3-216ENST00000503742 DCAF11Q8TEB1 546 aa29.95■■■□□ 2.38
UBE2D3-216ENST00000503742 HECW2Q9P2P5 1572 aa29.94■■■□□ 2.38
UBE2D3-216ENST00000503742 KIF3BO15066 747 aa29.94■■■□□ 2.38
UBE2D3-216ENST00000503742 KANK1Q14678 1352 aa29.93■■■□□ 2.38
UBE2D3-216ENST00000503742 C11orf95C9JLR9 678 aaPredicted RBP29.93■■■□□ 2.38
UBE2D3-216ENST00000503742 CCDC7Q96M83 1385 aa29.93■■■□□ 2.38
UBE2D3-216ENST00000503742 A2MP01023 1474 aa29.92■■■□□ 2.38
UBE2D3-216ENST00000503742 PTPRTO14522 1441 aa29.91■■■□□ 2.38
UBE2D3-216ENST00000503742 USP47Q96K76 1375 aa29.91■■■□□ 2.38
UBE2D3-216ENST00000503742 TRPM2O94759 1503 aa29.91■■■□□ 2.38
UBE2D3-216ENST00000503742 KDM2AQ9Y2K7 1162 aa29.9■■■□□ 2.38
UBE2D3-216ENST00000503742 SPHKAPQ2M3C7 1700 aa29.89■■■□□ 2.38
UBE2D3-216ENST00000503742 PRAG1Q86YV5 1406 aa29.89■■■□□ 2.37
UBE2D3-216ENST00000503742 ANP32CO43423 234 aa29.88■■■□□ 2.37
UBE2D3-216ENST00000503742 RNF17Q9BXT8 1623 aaKnown RBP29.88■■■□□ 2.37
UBE2D3-216ENST00000503742 FRMPD1Q5SYB0 1578 aa29.87■■■□□ 2.37
UBE2D3-216ENST00000503742 TRPM1Q7Z4N2 1603 aa29.85■■■□□ 2.37
UBE2D3-216ENST00000503742 SCAF1Q9H7N4 1312 aaKnown RBP29.84■■■□□ 2.37
UBE2D3-216ENST00000503742 ABCA6Q8N139 1617 aa29.84■■■□□ 2.37
UBE2D3-216ENST00000503742 CCER2I3L3R5 266 aa29.84■■■□□ 2.37
UBE2D3-216ENST00000503742 RGL3Q3MIN7 710 aa29.84■■■□□ 2.37
UBE2D3-216ENST00000503742 BCORL1Q5H9F3 1711 aa29.84■■■□□ 2.37
UBE2D3-216ENST00000503742 CNTLNQ9NXG0 1405 aa29.83■■■□□ 2.37
UBE2D3-216ENST00000503742 LMTK2Q8IWU2 1503 aa29.83■■■□□ 2.37
UBE2D3-216ENST00000503742 RICTORQ6R327 1708 aa29.82■■■□□ 2.36
UBE2D3-216ENST00000503742 KIF7Q2M1P5 1343 aa29.82■■■□□ 2.36
UBE2D3-216ENST00000503742 CEP152O94986 1710 aa29.81■■■□□ 2.36
UBE2D3-216ENST00000503742 CARD11Q9BXL7 1154 aa29.81■■■□□ 2.36
UBE2D3-216ENST00000503742 DIP2BQ9P265 1576 aa29.81■■■□□ 2.36
UBE2D3-216ENST00000503742 CLTCL1P53675 1640 aa29.79■■■□□ 2.36
UBE2D3-216ENST00000503742 EFCAB6Q5THR3 1501 aa29.79■■■□□ 2.36
UBE2D3-216ENST00000503742 RAPGEF3O95398 923 aa29.79■■■□□ 2.36
UBE2D3-216ENST00000503742 ROCK2O75116 1388 aaKnown RBP29.76■■■□□ 2.36
UBE2D3-216ENST00000503742 GPRASP1Q5JY77 1395 aa29.76■■■□□ 2.35
UBE2D3-216ENST00000503742 PPRC1Q5VV67 1664 aaKnown RBP29.75■■■□□ 2.35
UBE2D3-216ENST00000503742 LAMC1P11047 1609 aa29.74■■■□□ 2.35
UBE2D3-216ENST00000503742 DIP2CQ9Y2E4 1556 aa29.74■■■□□ 2.35
UBE2D3-216ENST00000503742 ARID4BQ4LE39 1312 aaPredicted RBP29.74■■■□□ 2.35
UBE2D3-216ENST00000503742 NEURL4Q96JN8 1562 aa29.74■■■□□ 2.35
UBE2D3-216ENST00000503742 FAM69CQ0P6D2 419 aa29.72■■■□□ 2.35
UBE2D3-216ENST00000503742 PELP1Q8IZL8 1130 aaKnown RBP29.68■■■□□ 2.34
UBE2D3-216ENST00000503742 NBPF1Q3BBV0 1214 aa29.66■■■□□ 2.34
UBE2D3-216ENST00000503742 STAC3Q96MF2 364 aa29.66■■■□□ 2.34
UBE2D3-216ENST00000503742 MADDQ8WXG6 1647 aa29.66■■■□□ 2.34
UBE2D3-216ENST00000503742 ST20-MTHFSA0A0A6YYL1 179 aa29.65■■■□□ 2.34
UBE2D3-216ENST00000503742 ZMYM4Q5VZL5 1548 aa29.64■■■□□ 2.33
UBE2D3-216ENST00000503742 ABCC3O15438 1527 aa29.63■■■□□ 2.33
UBE2D3-216ENST00000503742 YEATS2Q9ULM3 1422 aa29.61■■■□□ 2.33
UBE2D3-216ENST00000503742 UGGT1Q9NYU2 1555 aa29.61■■■□□ 2.33
UBE2D3-216ENST00000503742 GGT6Q6P531 493 aa29.61■■■□□ 2.33
UBE2D3-216ENST00000503742 NPATQ14207 1427 aa29.6■■■□□ 2.33
UBE2D3-216ENST00000503742 KIF1BO60333 1816 aa29.6■■■□□ 2.33
UBE2D3-216ENST00000503742 GTF3C3Q9Y5Q9 886 aa29.59■■■□□ 2.33
UBE2D3-216ENST00000503742 TSPOAP1O95153 1857 aa29.59■■■□□ 2.33
UBE2D3-216ENST00000503742 CAMSAP1Q5T5Y3 1602 aa29.56■■■□□ 2.32
UBE2D3-216ENST00000503742 PRKRIP1Q9H875 184 aaPredicted RBP29.55■■■□□ 2.32
UBE2D3-216ENST00000503742 WASHC2CQ9Y4E1 1318 aa29.54■■■□□ 2.32
UBE2D3-216ENST00000503742 IFT172Q9UG01 1749 aa29.52■■■□□ 2.32
UBE2D3-216ENST00000503742 MROH2AA6NES4 1674 aa29.51■■■□□ 2.32
UBE2D3-216ENST00000503742 ZC3H13Q5T200 1668 aaKnown RBP29.51■■■□□ 2.32
UBE2D3-216ENST00000503742 KIF13AQ9H1H9 1805 aa29.51■■■□□ 2.31
UBE2D3-216ENST00000503742 MYOM2P54296 1465 aa29.51■■■□□ 2.31
UBE2D3-216ENST00000503742 KIAA1210Q9ULL0 1709 aa29.5■■■□□ 2.31
UBE2D3-216ENST00000503742 ADGRB3O60242 1522 aa29.5■■■□□ 2.31
UBE2D3-216ENST00000503742 IQGAP1P46940 1657 aa29.48■■■□□ 2.31
UBE2D3-216ENST00000503742 CFAP65Q6ZU64 1925 aaKnown RBP29.47■■■□□ 2.31
UBE2D3-216ENST00000503742 TESK2Q96S53 571 aa29.47■■■□□ 2.31
UBE2D3-216ENST00000503742 POLR3GLQ9BT43 218 aa29.47■■■□□ 2.31
UBE2D3-216ENST00000503742 NOS1P29475 1434 aa29.47■■■□□ 2.31
UBE2D3-216ENST00000503742 ARHGAP31Q2M1Z3 1444 aa29.47■■■□□ 2.31
UBE2D3-216ENST00000503742 SIGLEC1Q9BZZ2 1709 aa29.47■■■□□ 2.31
UBE2D3-216ENST00000503742 COL17A1Q9UMD9 1497 aaPredicted RBP29.45■■■□□ 2.31
UBE2D3-216ENST00000503742 REREQ9P2R6 1566 aa29.45■■■□□ 2.3
UBE2D3-216ENST00000503742 NRXN1Q9ULB1 1477 aa29.43■■■□□ 2.3
UBE2D3-216ENST00000503742 PIK3C2BO00750 1634 aa29.41■■■□□ 2.3
UBE2D3-216ENST00000503742 SCAF11Q99590 1463 aaKnown RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms