RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ADGRB3O60242 1522 aa4.82□□□□□ -1.64
NEDD4-204ENST00000503468 PLCH2O75038 1416 aa4.81□□□□□ -1.64
NEDD4-204ENST00000503468 MYT1Q01538 1121 aa4.81□□□□□ -1.64
NEDD4-204ENST00000503468 PZPP20742 1482 aa4.81□□□□□ -1.64
NEDD4-204ENST00000503468 NCOA1Q15788 1441 aa4.81□□□□□ -1.64
NEDD4-204ENST00000503468 CNTLNQ9NXG0 1405 aa4.81□□□□□ -1.64
NEDD4-204ENST00000503468 NRXN3Q9Y4C0 1643 aa4.81□□□□□ -1.64
NEDD4-204ENST00000503468 DLC1Q96QB1 1528 aa4.8□□□□□ -1.64
NEDD4-204ENST00000503468 ERCC6L2Q5T890 1561 aa4.8□□□□□ -1.64
NEDD4-204ENST00000503468 ERBINQ96RT1 1412 aa4.8□□□□□ -1.64
NEDD4-204ENST00000503468 SCAF1Q9H7N4 1312 aaKnown RBP4.8□□□□□ -1.64
NEDD4-204ENST00000503468 SLIT1O75093 1534 aa4.8□□□□□ -1.64
NEDD4-204ENST00000503468 CSRNP3Q8WYN3 585 aa4.8□□□□□ -1.64
NEDD4-204ENST00000503468 FGD6Q6ZV73 1430 aa4.79□□□□□ -1.64
NEDD4-204ENST00000503468 PTPRKQ15262 1439 aa4.79□□□□□ -1.64
NEDD4-204ENST00000503468 UACAQ9BZF9 1416 aa4.79□□□□□ -1.64
NEDD4-204ENST00000503468 NCBP3Q53F19 620 aaKnown RBP4.78□□□□□ -1.64
NEDD4-204ENST00000503468 SCAPERQ9BY12 1400 aa4.78□□□□□ -1.64
NEDD4-204ENST00000503468 XRN1Q8IZH2 1706 aaKnown RBP4.77□□□□□ -1.65
NEDD4-204ENST00000503468 TOPAZ1Q8N9V7 1692 aa4.77□□□□□ -1.65
NEDD4-204ENST00000503468 SCAF11Q99590 1463 aaKnown RBP4.77□□□□□ -1.65
NEDD4-204ENST00000503468 CRYBG1Q9Y4K1 1723 aa4.77□□□□□ -1.65
NEDD4-204ENST00000503468 LMO7Q8WWI1 1683 aa4.77□□□□□ -1.65
NEDD4-204ENST00000503468 COL24A1Q17RW2 1714 aa4.76□□□□□ -1.65
NEDD4-204ENST00000503468 NALCNQ8IZF0 1738 aa4.76□□□□□ -1.65
NEDD4-204ENST00000503468 NPC1L1Q9UHC9 1359 aa4.76□□□□□ -1.65
NEDD4-204ENST00000503468 ZNF831Q5JPB2 1677 aa4.76□□□□□ -1.65
NEDD4-204ENST00000503468 NLRP1Q9C000 1473 aa4.76□□□□□ -1.65
NEDD4-204ENST00000503468 CPSF1Q10570 1443 aaKnown RBP4.75□□□□□ -1.65
NEDD4-204ENST00000503468 MARF1Q9Y4F3 1742 aaKnown RBP4.74□□□□□ -1.65
NEDD4-204ENST00000503468 NRKQ7Z2Y5 1582 aa4.74□□□□□ -1.65
NEDD4-204ENST00000503468 PPLO60437 1756 aa4.74□□□□□ -1.65
NEDD4-204ENST00000503468 STAC3Q96MF2 364 aa4.74□□□□□ -1.65
NEDD4-204ENST00000503468 PUS7Q96PZ0 661 aaKnown RBP4.74□□□□□ -1.65
NEDD4-204ENST00000503468 KIF1AQ12756 1690 aa4.74□□□□□ -1.65
NEDD4-204ENST00000503468 POGZQ7Z3K3 1410 aa4.73□□□□□ -1.65
NEDD4-204ENST00000503468 COL22A1Q8NFW1 1626 aaPredicted RBP4.73□□□□□ -1.65
NEDD4-204ENST00000503468 RIMBP3CA6NJZ7 1639 aa4.73□□□□□ -1.65
NEDD4-204ENST00000503468 RIMBP3BA6NNM3 1639 aa4.73□□□□□ -1.65
NEDD4-204ENST00000503468 RIMBP3Q9UFD9 1639 aa4.73□□□□□ -1.65
NEDD4-204ENST00000503468 TDRD9Q8NDG6 1382 aaKnown RBP4.72□□□□□ -1.65
NEDD4-204ENST00000503468 MYOM1P52179 1685 aa4.72□□□□□ -1.65
NEDD4-204ENST00000503468 ASXL1Q8IXJ9 1541 aa4.72□□□□□ -1.65
NEDD4-204ENST00000503468 N4BP2Q86UW6 1770 aaPredicted RBP4.72□□□□□ -1.65
NEDD4-204ENST00000503468 PTPRUQ92729 1446 aa4.72□□□□□ -1.65
NEDD4-204ENST00000503468 IQSEC2Q5JU85 1478 aa4.72□□□□□ -1.65
NEDD4-204ENST00000503468 ABCC5O15440 1437 aa4.71□□□□□ -1.65
NEDD4-204ENST00000503468 CPS1P31327 1500 aa4.71□□□□□ -1.66
NEDD4-204ENST00000503468 SHPRHQ149N8 1683 aa4.71□□□□□ -1.66
NEDD4-204ENST00000503468 ALKQ9UM73 1620 aa4.71□□□□□ -1.66
NEDD4-204ENST00000503468 LRPPRCP42704 1394 aaKnown RBP4.7□□□□□ -1.66
NEDD4-204ENST00000503468 NPATQ14207 1427 aa4.69□□□□□ -1.66
NEDD4-204ENST00000503468 NEXMIFQ5QGS0 1516 aa4.69□□□□□ -1.66
NEDD4-204ENST00000503468 SMG6Q86US8 1419 aaKnown RBP4.68□□□□□ -1.66
NEDD4-204ENST00000503468 C3P01024 1663 aa4.68□□□□□ -1.66
NEDD4-204ENST00000503468 MED1Q15648 1581 aaPredicted RBP4.68□□□□□ -1.66
NEDD4-204ENST00000503468 NCOA3Q9Y6Q9 1424 aa4.68□□□□□ -1.66
NEDD4-204ENST00000503468 TTBK1Q5TCY1 1321 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-204ENST00000503468 RSPH4AQ5TD94 716 aa4.67□□□□□ -1.66
NEDD4-204ENST00000503468 ANKRD30BQ9BXX2 1392 aa4.67□□□□□ -1.66
NEDD4-204ENST00000503468 PPP6R1Q9UPN7 881 aa4.67□□□□□ -1.66
NEDD4-204ENST00000503468 CLTCL1P53675 1640 aa4.67□□□□□ -1.66
NEDD4-204ENST00000503468 SETD5Q9C0A6 1442 aa4.66□□□□□ -1.66
NEDD4-204ENST00000503468 RALGAPBQ86X10 1494 aa4.66□□□□□ -1.66
NEDD4-204ENST00000503468 RGPD1P0DJD0 1748 aa4.66□□□□□ -1.66
NEDD4-204ENST00000503468 ASXL2Q76L83 1435 aa4.66□□□□□ -1.66
NEDD4-204ENST00000503468 ATP7AQ04656 1500 aa4.65□□□□□ -1.66
NEDD4-204ENST00000503468 ARHGAP5Q13017 1502 aa4.65□□□□□ -1.66
NEDD4-204ENST00000503468 DAPK1P53355 1430 aa4.65□□□□□ -1.66
NEDD4-204ENST00000503468 SSH2Q76I76 1423 aa4.65□□□□□ -1.66
NEDD4-204ENST00000503468 CEP170BQ9Y4F5 1589 aaPredicted RBP4.65□□□□□ -1.66
NEDD4-204ENST00000503468 ZBTB22O15209 634 aa4.64□□□□□ -1.67
NEDD4-204ENST00000503468 CARMIL2Q6F5E8 1435 aa4.63□□□□□ -1.67
NEDD4-204ENST00000503468 PREX1Q8TCU6 1659 aa4.63□□□□□ -1.67
NEDD4-204ENST00000503468 DHX57Q6P158 1386 aaKnown RBP4.62□□□□□ -1.67
NEDD4-204ENST00000503468 ARID4BQ4LE39 1312 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-204ENST00000503468 SIRT1Q96EB6 747 aa4.62□□□□□ -1.67
NEDD4-204ENST00000503468 GLI3P10071 1580 aa4.62□□□□□ -1.67
NEDD4-204ENST00000503468 YEATS2Q9ULM3 1422 aa4.62□□□□□ -1.67
NEDD4-204ENST00000503468 UBR1Q8IWV7 1749 aa4.61□□□□□ -1.67
NEDD4-204ENST00000503468 ADGRL1O94910 1474 aa4.61□□□□□ -1.67
NEDD4-204ENST00000503468 TMEM94Q12767 1356 aa4.6□□□□□ -1.67
NEDD4-204ENST00000503468 ARHGEF28Q8N1W1 1705 aaKnown RBP4.6□□□□□ -1.67
NEDD4-204ENST00000503468 SETD1BQ9UPS6 1966 aaKnown RBP4.6□□□□□ -1.67
NEDD4-204ENST00000503468 CD109Q6YHK3 1445 aa4.6□□□□□ -1.67
NEDD4-204ENST00000503468 ANKRD30AQ9BXX3 1397 aa4.6□□□□□ -1.67
NEDD4-204ENST00000503468 RIMS2Q9UQ26 1411 aa4.6□□□□□ -1.67
NEDD4-204ENST00000503468 PARP4Q9UKK3 1724 aaKnown RBP4.6□□□□□ -1.67
NEDD4-204ENST00000503468 LRRC37A3O60309 1634 aa4.59□□□□□ -1.67
NEDD4-204ENST00000503468 MON2Q7Z3U7 1717 aa4.59□□□□□ -1.67
NEDD4-204ENST00000503468 DUOX1Q9NRD9 1551 aa4.59□□□□□ -1.67
NEDD4-204ENST00000503468 SLC24A1O60721 1099 aa4.59□□□□□ -1.67
NEDD4-204ENST00000503468 PIK3R4Q99570 1358 aa4.59□□□□□ -1.68
NEDD4-204ENST00000503468 DHX29Q7Z478 1369 aaKnown RBP4.58□□□□□ -1.68
NEDD4-204ENST00000503468 CCNB3Q8WWL7 1395 aa4.58□□□□□ -1.68
NEDD4-204ENST00000503468 NKTRP30414 1462 aaKnown RBP4.58□□□□□ -1.68
NEDD4-204ENST00000503468 KANK1Q14678 1352 aa4.58□□□□□ -1.68
NEDD4-204ENST00000503468 CCDC144AA2RUR9 1427 aa4.58□□□□□ -1.68
NEDD4-204ENST00000503468 A2MP01023 1474 aa4.58□□□□□ -1.68
NEDD4-204ENST00000503468 RREB1Q92766 1687 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms