RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 THSD4Q6ZMP0 1018 aa10.94□□□□□ -0.66
GYPB-203ENST00000503255 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
GYPB-203ENST00000503255 PPP1R3GB7ZBB8 358 aa10.92□□□□□ -0.66
GYPB-203ENST00000503255 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
GYPB-203ENST00000503255 C6orf132Q5T0Z8 1188 aa10.91□□□□□ -0.66
GYPB-203ENST00000503255 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
GYPB-203ENST00000503255 FBXW7Q969H0 707 aa10.9□□□□□ -0.66
GYPB-203ENST00000503255 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
GYPB-203ENST00000503255 KIAA1468Q9P260 1216 aa10.89□□□□□ -0.67
GYPB-203ENST00000503255 RABGEF1Q9UJ41 708 aa10.89□□□□□ -0.67
GYPB-203ENST00000503255 AMER1Q5JTC6 1135 aaPredicted RBP10.88□□□□□ -0.67
GYPB-203ENST00000503255 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
GYPB-203ENST00000503255 EPAS1Q99814 870 aa10.86□□□□□ -0.67
GYPB-203ENST00000503255 SEPT9Q9UHD8 586 aaPredicted RBP10.85□□□□□ -0.67
GYPB-203ENST00000503255 BCAMP50895 628 aa10.84□□□□□ -0.67
GYPB-203ENST00000503255 TSR1Q2NL82 804 aaKnown RBP10.84□□□□□ -0.67
GYPB-203ENST00000503255 NBR1Q14596 966 aa10.83□□□□□ -0.68
GYPB-203ENST00000503255 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
GYPB-203ENST00000503255 PDIA6Q15084 440 aa10.8□□□□□ -0.68
GYPB-203ENST00000503255 E2F4Q16254 413 aa10.8□□□□□ -0.68
GYPB-203ENST00000503255 ANKK1Q8NFD2 765 aa10.8□□□□□ -0.68
GYPB-203ENST00000503255 ZFRQ96KR1 1074 aaKnown RBP10.8□□□□□ -0.68
GYPB-203ENST00000503255 TRIM6-TRIM34B2RNG4 842 aa10.79□□□□□ -0.68
GYPB-203ENST00000503255 MAP3K7O43318 606 aa10.79□□□□□ -0.68
GYPB-203ENST00000503255 GRXCR2A6NFK2 248 aa10.78□□□□□ -0.68
GYPB-203ENST00000503255 EN1Q05925 392 aaPredicted RBP10.78□□□□□ -0.68
GYPB-203ENST00000503255 WDR70Q9NW82 654 aa10.77□□□□□ -0.69
GYPB-203ENST00000503255 TSKSQ9UJT2 592 aa10.77□□□□□ -0.69
GYPB-203ENST00000503255 SOWAHBA6NEL2 793 aa10.76□□□□□ -0.69
GYPB-203ENST00000503255 LAPTM4BQ86VI4 370 aa10.76□□□□□ -0.69
GYPB-203ENST00000503255 WBP1LQ9NX94 342 aa10.76□□□□□ -0.69
GYPB-203ENST00000503255 SPDYE16A6NNV3 312 aaPredicted RBP10.74□□□□□ -0.69
GYPB-203ENST00000503255 SMAPO00193 183 aa10.74□□□□□ -0.69
GYPB-203ENST00000503255 ONECUT3O60422 494 aaPredicted RBP10.74□□□□□ -0.69
GYPB-203ENST00000503255 C3orf80F5H4A9 247 aa10.73□□□□□ -0.69
GYPB-203ENST00000503255 FAM198AQ9UFP1 575 aa10.73□□□□□ -0.69
GYPB-203ENST00000503255 FAM98CQ17RN3 349 aaKnown RBP10.71□□□□□ -0.69
GYPB-203ENST00000503255 A0A0G2JS52 829 aa10.7□□□□□ -0.7
GYPB-203ENST00000503255 IFFO2Q5TF58 517 aa10.7□□□□□ -0.7
GYPB-203ENST00000503255 CDCA7LQ96GN5 454 aa10.7□□□□□ -0.7
GYPB-203ENST00000503255 OSBPP22059 807 aa10.69□□□□□ -0.7
GYPB-203ENST00000503255 PACS2Q86VP3 889 aa10.69□□□□□ -0.7
GYPB-203ENST00000503255 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
GYPB-203ENST00000503255 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
GYPB-203ENST00000503255 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.68□□□□□ -0.7
GYPB-203ENST00000503255 HPS5Q9UPZ3 1129 aa10.68□□□□□ -0.7
GYPB-203ENST00000503255 PRSS12P56730 875 aa10.67□□□□□ -0.7
GYPB-203ENST00000503255 LRCH3Q96II8 777 aa10.67□□□□□ -0.7
GYPB-203ENST00000503255 ARIH1Q9Y4X5 557 aaPredicted RBP10.67□□□□□ -0.7
GYPB-203ENST00000503255 TSR3Q9UJK0 312 aaKnown RBP10.65□□□□□ -0.7
GYPB-203ENST00000503255 ITGBL1O95965 494 aaPredicted RBP10.64□□□□□ -0.71
GYPB-203ENST00000503255 SAMD7Q7Z3H4 446 aa10.63□□□□□ -0.71
GYPB-203ENST00000503255 TATDN2Q93075 761 aa10.62□□□□□ -0.71
GYPB-203ENST00000503255 PNMA3Q9UL41 463 aa10.62□□□□□ -0.71
GYPB-203ENST00000503255 PPP4CP60510 307 aa10.6□□□□□ -0.71
GYPB-203ENST00000503255 KCNC4Q03721 635 aa10.6□□□□□ -0.71
GYPB-203ENST00000503255 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
GYPB-203ENST00000503255 NYAP1Q6ZVC0 841 aa10.59□□□□□ -0.71
GYPB-203ENST00000503255 NPDC1Q9NQX5 325 aaPredicted RBP10.59□□□□□ -0.71
GYPB-203ENST00000503255 MLLT3P42568 568 aaPredicted RBP10.58□□□□□ -0.72
GYPB-203ENST00000503255 CERKQ8TCT0 537 aa10.58□□□□□ -0.72
GYPB-203ENST00000503255 RGS20O76081 388 aa10.57□□□□□ -0.72
GYPB-203ENST00000503255 RNF40O75150 1001 aa10.55□□□□□ -0.72
GYPB-203ENST00000503255 PADI6Q6TGC4 694 aa10.55□□□□□ -0.72
GYPB-203ENST00000503255 IRX2Q9BZI1 471 aaPredicted RBP10.55□□□□□ -0.72
GYPB-203ENST00000503255 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
GYPB-203ENST00000503255 KCNV2Q8TDN2 545 aa10.54□□□□□ -0.72
GYPB-203ENST00000503255 TJAP1Q5JTD0 557 aa10.52□□□□□ -0.73
GYPB-203ENST00000503255 TTC13Q8NBP0 860 aa10.51□□□□□ -0.73
GYPB-203ENST00000503255 ZNF516Q92618 1163 aa10.5□□□□□ -0.73
GYPB-203ENST00000503255 ARHGEF1Q92888 912 aaKnown RBP10.5□□□□□ -0.73
GYPB-203ENST00000503255 APLP1P51693 650 aa10.49□□□□□ -0.73
GYPB-203ENST00000503255 SWT1Q5T5J6 900 aaKnown RBP10.49□□□□□ -0.73
GYPB-203ENST00000503255 MTRQ99707 1265 aa10.49□□□□□ -0.73
GYPB-203ENST00000503255 HDGFP51858 240 aaKnown RBP10.48□□□□□ -0.73
GYPB-203ENST00000503255 RBM27Q9P2N5 1060 aaKnown RBP10.47□□□□□ -0.73
GYPB-203ENST00000503255 EYA1Q99502 592 aa10.46□□□□□ -0.73
GYPB-203ENST00000503255 FAM161AQ3B820 660 aa10.45□□□□□ -0.74
GYPB-203ENST00000503255 NKX2-3Q8TAU0 364 aa10.45□□□□□ -0.74
GYPB-203ENST00000503255 COPS2P61201 443 aa10.42□□□□□ -0.74
GYPB-203ENST00000503255 PTGDRQ13258 359 aa10.42□□□□□ -0.74
GYPB-203ENST00000503255 PPP1R18Q6NYC8 613 aa10.42□□□□□ -0.74
GYPB-203ENST00000503255 IL21Q9HBE4 155 aa10.42□□□□□ -0.74
GYPB-203ENST00000503255 NUTM2FA1L443 756 aa10.41□□□□□ -0.74
GYPB-203ENST00000503255 SEMA3EO15041 775 aa10.41□□□□□ -0.74
GYPB-203ENST00000503255 Q6ZNB5 142 aa10.38□□□□□ -0.75
GYPB-203ENST00000503255 SLF2Q8IX21 1173 aa10.38□□□□□ -0.75
GYPB-203ENST00000503255 PRKD2Q9BZL6 878 aa10.37□□□□□ -0.75
GYPB-203ENST00000503255 ADGRG1Q9Y653 693 aa10.36□□□□□ -0.75
GYPB-203ENST00000503255 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.35□□□□□ -0.75
GYPB-203ENST00000503255 GFRA3O60609 400 aa10.33□□□□□ -0.76
GYPB-203ENST00000503255 RCCD1A6NED2 376 aa10.32□□□□□ -0.76
GYPB-203ENST00000503255 DNAJB2P25686 324 aa10.31□□□□□ -0.76
GYPB-203ENST00000503255 BLOC1S3Q6QNY0 202 aa10.31□□□□□ -0.76
GYPB-203ENST00000503255 RBM46Q8TBY0 533 aaKnown RBP10.31□□□□□ -0.76
GYPB-203ENST00000503255 LCE2BO14633 110 aa10.3□□□□□ -0.76
GYPB-203ENST00000503255 ZPR1O75312 459 aa10.3□□□□□ -0.76
GYPB-203ENST00000503255 RBM26Q5T8P6 1007 aaKnown RBP10.3□□□□□ -0.76
GYPB-203ENST00000503255 TMEM134Q9H6X4 195 aa10.3□□□□□ -0.76
GYPB-203ENST00000503255 PCDHB3Q9Y5E6 796 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms