RNA–Protein interactions for RNA: ENST00000503248.1

PHF3-206, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-206ENST00000503248 MAP3K7O43318 606 aa9.35□□□□□ -0.91
PHF3-206ENST00000503248 FCHSD2O94868 740 aa9.35□□□□□ -0.91
PHF3-206ENST00000503248 NUTM2FA1L443 756 aa9.34□□□□□ -0.91
PHF3-206ENST00000503248 RBM26Q5T8P6 1007 aaKnown RBP9.34□□□□□ -0.91
PHF3-206ENST00000503248 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
PHF3-206ENST00000503248 LHX6Q9UPM6 363 aa9.34□□□□□ -0.91
PHF3-206ENST00000503248 HIC1Q14526 733 aa9.33□□□□□ -0.92
PHF3-206ENST00000503248 KHSRPQ92945 711 aaKnown RBP eCLIP9.33□□□□□ -0.92
PHF3-206ENST00000503248 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
PHF3-206ENST00000503248 ZMYND10O75800 440 aa9.32□□□□□ -0.92
PHF3-206ENST00000503248 BCL2L12Q9HB09 334 aa9.31□□□□□ -0.92
PHF3-206ENST00000503248 RBM27Q9P2N5 1060 aaKnown RBP9.3□□□□□ -0.92
PHF3-206ENST00000503248 ERBB3P21860 1342 aa9.3□□□□□ -0.92
PHF3-206ENST00000503248 PTPREP23469 700 aa9.29□□□□□ -0.92
PHF3-206ENST00000503248 PBX2P40425 430 aa9.29□□□□□ -0.92
PHF3-206ENST00000503248 BARGINQ6ZT62 677 aa9.29□□□□□ -0.92
PHF3-206ENST00000503248 GNPATO15228 680 aa9.28□□□□□ -0.92
PHF3-206ENST00000503248 PTGDRQ13258 359 aa9.28□□□□□ -0.92
PHF3-206ENST00000503248 C6orf132Q5T0Z8 1188 aa9.28□□□□□ -0.92
PHF3-206ENST00000503248 RBM33Q96EV2 1170 aaKnown RBP9.27□□□□□ -0.93
PHF3-206ENST00000503248 MINK1Q8N4C8 1332 aaPredicted RBP9.26□□□□□ -0.93
PHF3-206ENST00000503248 GPR37O15354 613 aa9.25□□□□□ -0.93
PHF3-206ENST00000503248 ADAM33Q9BZ11 813 aa9.25□□□□□ -0.93
PHF3-206ENST00000503248 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
PHF3-206ENST00000503248 MAP2K5Q13163 448 aa9.24□□□□□ -0.93
PHF3-206ENST00000503248 KRI1Q8N9T8 703 aaKnown RBP9.24□□□□□ -0.93
PHF3-206ENST00000503248 ONECUT3O60422 494 aaPredicted RBP9.23□□□□□ -0.93
PHF3-206ENST00000503248 PRKCSHP14314 528 aaPredicted RBP9.22□□□□□ -0.93
PHF3-206ENST00000503248 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
PHF3-206ENST00000503248 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
PHF3-206ENST00000503248 AK7Q96M32 723 aa9.22□□□□□ -0.93
PHF3-206ENST00000503248 ARHGAP33O14559 1287 aa9.21□□□□□ -0.94
PHF3-206ENST00000503248 TSR1Q2NL82 804 aaKnown RBP9.21□□□□□ -0.94
PHF3-206ENST00000503248 ZNF687Q8N1G0 1237 aa9.21□□□□□ -0.94
PHF3-206ENST00000503248 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.94
PHF3-206ENST00000503248 SLC4A5Q9BY07 1137 aa9.2□□□□□ -0.94
PHF3-206ENST00000503248 DAXXQ9UER7 740 aaPredicted RBP9.2□□□□□ -0.94
PHF3-206ENST00000503248 PRSS12P56730 875 aa9.19□□□□□ -0.94
PHF3-206ENST00000503248 CDHR5Q9HBB8 845 aa9.19□□□□□ -0.94
PHF3-206ENST00000503248 IRF6O14896 467 aa9.18□□□□□ -0.94
PHF3-206ENST00000503248 OATP04181 439 aa9.18□□□□□ -0.94
PHF3-206ENST00000503248 KCNK17Q96T54 332 aa9.17□□□□□ -0.94
PHF3-206ENST00000503248 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
PHF3-206ENST00000503248 TTC13Q8NBP0 860 aa9.16□□□□□ -0.94
PHF3-206ENST00000503248 CDCA7LQ96GN5 454 aa9.16□□□□□ -0.94
PHF3-206ENST00000503248 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
PHF3-206ENST00000503248 NBPF26B4DH59 902 aa9.15□□□□□ -0.94
PHF3-206ENST00000503248 TK2O00142 265 aa9.14□□□□□ -0.95
PHF3-206ENST00000503248 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
PHF3-206ENST00000503248 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
PHF3-206ENST00000503248 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
PHF3-206ENST00000503248 CCDC102AQ96A19 550 aa9.13□□□□□ -0.95
PHF3-206ENST00000503248 COL9A1P20849 921 aa9.12□□□□□ -0.95
PHF3-206ENST00000503248 AMHR2Q16671 573 aa9.11□□□□□ -0.95
PHF3-206ENST00000503248 ZBED2Q9BTP6 218 aa9.11□□□□□ -0.95
PHF3-206ENST00000503248 PLA2G2EQ9NZK7 142 aa9.11□□□□□ -0.95
PHF3-206ENST00000503248 TRIM66O15016 1216 aa9.1□□□□□ -0.95
PHF3-206ENST00000503248 NBPF3Q9H094 633 aa9.1□□□□□ -0.95
PHF3-206ENST00000503248 RABGEF1Q9UJ41 708 aa9.1□□□□□ -0.95
PHF3-206ENST00000503248 ADGRG1Q9Y653 693 aa9.1□□□□□ -0.95
PHF3-206ENST00000503248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.08□□□□□ -0.96
PHF3-206ENST00000503248 FECHP22830 423 aa9.08□□□□□ -0.96
PHF3-206ENST00000503248 CLCN1P35523 988 aa9.07□□□□□ -0.96
PHF3-206ENST00000503248 SLC4A3P48751 1232 aa9.07□□□□□ -0.96
PHF3-206ENST00000503248 PSEN2P49810 448 aa9.07□□□□□ -0.96
PHF3-206ENST00000503248 METTL3Q86U44 580 aaKnown RBP9.07□□□□□ -0.96
PHF3-206ENST00000503248 LAPTM4BQ86VI4 370 aa9.07□□□□□ -0.96
PHF3-206ENST00000503248 PXYLP1Q8TE99 480 aa9.07□□□□□ -0.96
PHF3-206ENST00000503248 LSM11P83369 360 aaKnown RBP eCLIP9.06□□□□□ -0.96
PHF3-206ENST00000503248 PDE4DQ08499 809 aa9.06□□□□□ -0.96
PHF3-206ENST00000503248 TATDN2Q93075 761 aa9.06□□□□□ -0.96
PHF3-206ENST00000503248 TSKSQ9UJT2 592 aa9.06□□□□□ -0.96
PHF3-206ENST00000503248 VPS9D1Q9Y2B5 631 aa9.05□□□□□ -0.96
PHF3-206ENST00000503248 DNAJB2P25686 324 aa9.04□□□□□ -0.96
PHF3-206ENST00000503248 HDGFP51858 240 aaKnown RBP9.04□□□□□ -0.96
PHF3-206ENST00000503248 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
PHF3-206ENST00000503248 EYA1Q99502 592 aa9.04□□□□□ -0.96
PHF3-206ENST00000503248 KIAA1468Q9P260 1216 aa9.04□□□□□ -0.96
PHF3-206ENST00000503248 PNMA3Q9UL41 463 aa9.04□□□□□ -0.96
PHF3-206ENST00000503248 TTLL12Q14166 644 aaPredicted RBP9.03□□□□□ -0.96
PHF3-206ENST00000503248 NEUROD2Q15784 382 aa9.03□□□□□ -0.96
PHF3-206ENST00000503248 PROX2Q3B8N5 592 aa9.03□□□□□ -0.96
PHF3-206ENST00000503248 NUDT18Q6ZVK8 323 aa9.03□□□□□ -0.96
PHF3-206ENST00000503248 STAC3Q96MF2 364 aa9.03□□□□□ -0.96
PHF3-206ENST00000503248 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
PHF3-206ENST00000503248 FAM98CQ17RN3 349 aaKnown RBP9.02□□□□□ -0.97
PHF3-206ENST00000503248 DMRTA1Q5VZB9 504 aa9.02□□□□□ -0.97
PHF3-206ENST00000503248 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
PHF3-206ENST00000503248 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
PHF3-206ENST00000503248 AXIN2Q9Y2T1 843 aa9.02□□□□□ -0.97
PHF3-206ENST00000503248 RSPH4AQ5TD94 716 aa9.01□□□□□ -0.97
PHF3-206ENST00000503248 ADGRD1Q6QNK2 874 aa9.01□□□□□ -0.97
PHF3-206ENST00000503248 SULF1Q8IWU6 871 aa9.01□□□□□ -0.97
PHF3-206ENST00000503248 FAM198AQ9UFP1 575 aa9□□□□□ -0.97
PHF3-206ENST00000503248 RCCD1A6NED2 376 aa8.99□□□□□ -0.97
PHF3-206ENST00000503248 ANKRD13DQ6ZTN6 518 aa8.99□□□□□ -0.97
PHF3-206ENST00000503248 MRPL50Q8N5N7 158 aaKnown RBP8.99□□□□□ -0.97
PHF3-206ENST00000503248 DDRGK1Q96HY6 314 aa8.99□□□□□ -0.97
PHF3-206ENST00000503248 BHMG1C9JSJ3 638 aaPredicted RBP8.98□□□□□ -0.97
PHF3-206ENST00000503248 PARP9Q8IXQ6 854 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms