RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
EXOSC9-203ENST00000503139 SCUBE2Q9NQ36 999 aa16.79■□□□□ 0.28
EXOSC9-203ENST00000503139 NUDT7P0C024 238 aa16.78■□□□□ 0.28
EXOSC9-203ENST00000503139 GPR153Q6NV75 609 aa16.78■□□□□ 0.28
EXOSC9-203ENST00000503139 MAMSTRQ6ZN01 415 aa16.78■□□□□ 0.28
EXOSC9-203ENST00000503139 PARP9Q8IXQ6 854 aa16.78■□□□□ 0.28
EXOSC9-203ENST00000503139 IL27Q8NEV9 243 aa16.77■□□□□ 0.28
EXOSC9-203ENST00000503139 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
EXOSC9-203ENST00000503139 RIMBP2O15034 1052 aa16.75■□□□□ 0.27
EXOSC9-203ENST00000503139 ZNF454Q8N9F8 522 aa16.74■□□□□ 0.27
EXOSC9-203ENST00000503139 ZDHHC16Q969W1 377 aa16.73■□□□□ 0.27
EXOSC9-203ENST00000503139 C6orf132Q5T0Z8 1188 aa16.71■□□□□ 0.27
EXOSC9-203ENST00000503139 FAM117AQ9C073 453 aa16.71■□□□□ 0.27
EXOSC9-203ENST00000503139 ERICH6Q7L0X2 663 aa16.7■□□□□ 0.26
EXOSC9-203ENST00000503139 ADAM33Q9BZ11 813 aa16.69■□□□□ 0.26
EXOSC9-203ENST00000503139 CERKQ8TCT0 537 aa16.68■□□□□ 0.26
EXOSC9-203ENST00000503139 ZNF710Q8N1W2 664 aa16.67■□□□□ 0.26
EXOSC9-203ENST00000503139 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
EXOSC9-203ENST00000503139 TTLL12Q14166 644 aaPredicted RBP16.66■□□□□ 0.26
EXOSC9-203ENST00000503139 DDRGK1Q96HY6 314 aa16.64■□□□□ 0.25
EXOSC9-203ENST00000503139 REPIN1Q9BWE0 567 aaKnown RBP16.64■□□□□ 0.25
EXOSC9-203ENST00000503139 LHX6Q9UPM6 363 aa16.64■□□□□ 0.25
EXOSC9-203ENST00000503139 PHOX2BQ99453 314 aa16.63■□□□□ 0.25
EXOSC9-203ENST00000503139 TMUB1Q9BVT8 246 aa16.63■□□□□ 0.25
EXOSC9-203ENST00000503139 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
EXOSC9-203ENST00000503139 PADI6Q6TGC4 694 aa16.62■□□□□ 0.25
EXOSC9-203ENST00000503139 GIGYF2Q6Y7W6 1299 aaKnown RBP16.62■□□□□ 0.25
EXOSC9-203ENST00000503139 TTC13Q8NBP0 860 aa16.62■□□□□ 0.25
EXOSC9-203ENST00000503139 MS4A1P11836 297 aa16.58■□□□□ 0.24
EXOSC9-203ENST00000503139 FAM161AQ3B820 660 aa16.58■□□□□ 0.24
EXOSC9-203ENST00000503139 ADGRG1Q9Y653 693 aa16.58■□□□□ 0.24
EXOSC9-203ENST00000503139 METTL3Q86U44 580 aaKnown RBP16.57■□□□□ 0.24
EXOSC9-203ENST00000503139 CLCN1P35523 988 aa16.56■□□□□ 0.24
EXOSC9-203ENST00000503139 PPP4R3BQ5MIZ7 849 aa16.56■□□□□ 0.24
EXOSC9-203ENST00000503139 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
EXOSC9-203ENST00000503139 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
EXOSC9-203ENST00000503139 SNPHO15079 494 aa16.55■□□□□ 0.24
EXOSC9-203ENST00000503139 OATP04181 439 aa16.55■□□□□ 0.24
EXOSC9-203ENST00000503139 HOXB1P14653 301 aaPredicted RBP16.55■□□□□ 0.24
EXOSC9-203ENST00000503139 PRSS12P56730 875 aa16.55■□□□□ 0.24
EXOSC9-203ENST00000503139 MDM2Q00987 491 aaPredicted RBP16.54■□□□□ 0.24
EXOSC9-203ENST00000503139 BCL2L12Q9HB09 334 aa16.54■□□□□ 0.24
EXOSC9-203ENST00000503139 GPCPD1Q9NPB8 672 aa16.54■□□□□ 0.24
EXOSC9-203ENST00000503139 PXYLP1Q8TE99 480 aa16.53■□□□□ 0.24
EXOSC9-203ENST00000503139 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.24
EXOSC9-203ENST00000503139 COL9A1P20849 921 aa16.51■□□□□ 0.23
EXOSC9-203ENST00000503139 OTUD5Q96G74 571 aa16.5■□□□□ 0.23
EXOSC9-203ENST00000503139 NLRP7Q8WX94 980 aa16.48■□□□□ 0.23
EXOSC9-203ENST00000503139 GOPCQ9HD26 462 aa16.48■□□□□ 0.23
EXOSC9-203ENST00000503139 FAM198AQ9UFP1 575 aa16.48■□□□□ 0.23
EXOSC9-203ENST00000503139 PPP1R3GB7ZBB8 358 aa16.46■□□□□ 0.23
EXOSC9-203ENST00000503139 PTPREP23469 700 aa16.44■□□□□ 0.22
EXOSC9-203ENST00000503139 SSTR3P32745 418 aaPredicted RBP16.44■□□□□ 0.22
EXOSC9-203ENST00000503139 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
EXOSC9-203ENST00000503139 RBM46Q8TBY0 533 aaKnown RBP16.41■□□□□ 0.22
EXOSC9-203ENST00000503139 TSKSQ9UJT2 592 aa16.41■□□□□ 0.22
EXOSC9-203ENST00000503139 EYA1Q99502 592 aa16.39■□□□□ 0.21
EXOSC9-203ENST00000503139 C3orf80F5H4A9 247 aa16.36■□□□□ 0.21
EXOSC9-203ENST00000503139 SH3D19Q5HYK7 790 aa16.36■□□□□ 0.21
EXOSC9-203ENST00000503139 BEGAINQ9BUH8 593 aa16.36■□□□□ 0.21
EXOSC9-203ENST00000503139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
EXOSC9-203ENST00000503139 TRIM6-TRIM34B2RNG4 842 aa16.35■□□□□ 0.21
EXOSC9-203ENST00000503139 RCCD1A6NED2 376 aa16.33■□□□□ 0.2
EXOSC9-203ENST00000503139 KCNK17Q96T54 332 aa16.32■□□□□ 0.2
EXOSC9-203ENST00000503139 NUDT18Q6ZVK8 323 aa16.31■□□□□ 0.2
EXOSC9-203ENST00000503139 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
EXOSC9-203ENST00000503139 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
EXOSC9-203ENST00000503139 PROX2Q3B8N5 592 aa16.29■□□□□ 0.2
EXOSC9-203ENST00000503139 LHX8Q68G74 356 aa16.29■□□□□ 0.2
EXOSC9-203ENST00000503139 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
EXOSC9-203ENST00000503139 ONECUT3O60422 494 aaPredicted RBP16.28■□□□□ 0.2
EXOSC9-203ENST00000503139 TATDN2Q93075 761 aa16.28■□□□□ 0.2
EXOSC9-203ENST00000503139 SKIV2LQ15477 1246 aaKnown RBP16.27■□□□□ 0.2
EXOSC9-203ENST00000503139 PACS2Q86VP3 889 aa16.27■□□□□ 0.2
EXOSC9-203ENST00000503139 PNMA3Q9UL41 463 aa16.27■□□□□ 0.2
EXOSC9-203ENST00000503139 DNAJB2P25686 324 aa16.26■□□□□ 0.19
EXOSC9-203ENST00000503139 ZBED2Q9BTP6 218 aa16.25■□□□□ 0.19
EXOSC9-203ENST00000503139 TMEM134Q9H6X4 195 aa16.23■□□□□ 0.19
EXOSC9-203ENST00000503139 MYSM1Q5VVJ2 828 aa16.22■□□□□ 0.19
EXOSC9-203ENST00000503139 POTEEQ6S8J3 1075 aa16.22■□□□□ 0.19
EXOSC9-203ENST00000503139 KCNH8Q96L42 1107 aa16.22■□□□□ 0.19
EXOSC9-203ENST00000503139 CD46P15529 392 aa16.21■□□□□ 0.19
EXOSC9-203ENST00000503139 PSEN2P49810 448 aa16.21■□□□□ 0.19
EXOSC9-203ENST00000503139 VARS2Q5ST30 1063 aaKnown RBP16.21■□□□□ 0.19
EXOSC9-203ENST00000503139 SMAPO00193 183 aa16.2■□□□□ 0.18
EXOSC9-203ENST00000503139 TBC1D2Q9BYX2 928 aa16.2■□□□□ 0.18
EXOSC9-203ENST00000503139 ERBB3P21860 1342 aa16.19■□□□□ 0.18
EXOSC9-203ENST00000503139 ST18O60284 1047 aa16.19■□□□□ 0.18
EXOSC9-203ENST00000503139 KIAA1468Q9P260 1216 aa16.18■□□□□ 0.18
EXOSC9-203ENST00000503139 ARHGAP33O14559 1287 aa16.17■□□□□ 0.18
EXOSC9-203ENST00000503139 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
EXOSC9-203ENST00000503139 PROCA1Q8NCQ7 364 aaPredicted RBP16.17■□□□□ 0.18
EXOSC9-203ENST00000503139 POLR3EQ9NVU0 708 aa16.17■□□□□ 0.18
EXOSC9-203ENST00000503139 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.16■□□□□ 0.18
EXOSC9-203ENST00000503139 SLC4A5Q9BY07 1137 aa16.16■□□□□ 0.18
EXOSC9-203ENST00000503139 FLIIQ13045 1269 aa16.15■□□□□ 0.18
EXOSC9-203ENST00000503139 DIXDC1Q155Q3 683 aa16.15■□□□□ 0.18
EXOSC9-203ENST00000503139 ZMYND15Q9H091 742 aa16.15■□□□□ 0.18
EXOSC9-203ENST00000503139 DDX11L8A8MPP1 907 aa16.14■□□□□ 0.17
EXOSC9-203ENST00000503139 CLK2P49760 499 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms