RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 MBD5Q9P267 1494 aa16.96■□□□□ 0.31
SNCA-207ENST00000502987 PLXNC1O60486 1568 aa16.95■□□□□ 0.3
SNCA-207ENST00000502987 DSG3P32926 999 aa16.95■□□□□ 0.3
SNCA-207ENST00000502987 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
SNCA-207ENST00000502987 NPATQ14207 1427 aa16.95■□□□□ 0.3
SNCA-207ENST00000502987 KIF3BO15066 747 aa16.94■□□□□ 0.3
SNCA-207ENST00000502987 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
SNCA-207ENST00000502987 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
SNCA-207ENST00000502987 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
SNCA-207ENST00000502987 CAMSAP2Q08AD1 1489 aa16.93■□□□□ 0.3
SNCA-207ENST00000502987 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
SNCA-207ENST00000502987 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
SNCA-207ENST00000502987 DHX29Q7Z478 1369 aaKnown RBP16.92■□□□□ 0.3
SNCA-207ENST00000502987 PTPRTO14522 1441 aa16.91■□□□□ 0.3
SNCA-207ENST00000502987 CAMSAP1Q5T5Y3 1602 aa16.91■□□□□ 0.3
SNCA-207ENST00000502987 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
SNCA-207ENST00000502987 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
SNCA-207ENST00000502987 APLP2Q06481 763 aa16.89■□□□□ 0.29
SNCA-207ENST00000502987 PTPRKQ15262 1439 aa16.88■□□□□ 0.29
SNCA-207ENST00000502987 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
SNCA-207ENST00000502987 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
SNCA-207ENST00000502987 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
SNCA-207ENST00000502987 MYO3AQ8NEV4 1616 aa16.87■□□□□ 0.29
SNCA-207ENST00000502987 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
SNCA-207ENST00000502987 PKD2Q13563 968 aa16.84■□□□□ 0.29
SNCA-207ENST00000502987 FBXO31Q5XUX0 539 aaPredicted RBP16.84■□□□□ 0.29
SNCA-207ENST00000502987 CEP170BQ9Y4F5 1589 aaPredicted RBP16.84■□□□□ 0.29
SNCA-207ENST00000502987 ZNF142P52746 1687 aaPredicted RBP16.83■□□□□ 0.28
SNCA-207ENST00000502987 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
SNCA-207ENST00000502987 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
SNCA-207ENST00000502987 TNRQ92752 1358 aa16.8■□□□□ 0.28
SNCA-207ENST00000502987 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
SNCA-207ENST00000502987 A2ML1A8K2U0 1454 aa16.79■□□□□ 0.28
SNCA-207ENST00000502987 PLA2R1Q13018 1463 aa16.79■□□□□ 0.28
SNCA-207ENST00000502987 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
SNCA-207ENST00000502987 ZNF335Q9H4Z2 1342 aaPredicted RBP16.78■□□□□ 0.28
SNCA-207ENST00000502987 MIA2Q96PC5 1412 aa16.78■□□□□ 0.28
SNCA-207ENST00000502987 DNMT1P26358 1616 aaKnown RBP16.78■□□□□ 0.28
SNCA-207ENST00000502987 PZPP20742 1482 aa16.77■□□□□ 0.28
SNCA-207ENST00000502987 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
SNCA-207ENST00000502987 FAM135AQ9P2D6 1515 aa16.75■□□□□ 0.27
SNCA-207ENST00000502987 THEMISQ8N1K5 641 aaPredicted RBP16.75■□□□□ 0.27
SNCA-207ENST00000502987 MAST1Q9Y2H9 1570 aa16.75■□□□□ 0.27
SNCA-207ENST00000502987 TCOF1Q13428 1488 aaKnown RBP16.74■□□□□ 0.27
SNCA-207ENST00000502987 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
SNCA-207ENST00000502987 ANKLE2Q86XL3 938 aa16.73■□□□□ 0.27
SNCA-207ENST00000502987 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
SNCA-207ENST00000502987 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
SNCA-207ENST00000502987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNCA-207ENST00000502987 IQSEC2Q5JU85 1478 aa16.72■□□□□ 0.27
SNCA-207ENST00000502987 RNF17Q9BXT8 1623 aaKnown RBP16.7■□□□□ 0.26
SNCA-207ENST00000502987 PTPN23Q9H3S7 1636 aa16.7■□□□□ 0.26
SNCA-207ENST00000502987 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
SNCA-207ENST00000502987 ZC3H13Q5T200 1668 aaKnown RBP16.69■□□□□ 0.26
SNCA-207ENST00000502987 UGGT1Q9NYU2 1555 aa16.69■□□□□ 0.26
SNCA-207ENST00000502987 NLRP1Q9C000 1473 aa16.69■□□□□ 0.26
SNCA-207ENST00000502987 DISP3Q9P2K9 1392 aa16.69■□□□□ 0.26
SNCA-207ENST00000502987 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
SNCA-207ENST00000502987 CEP152O94986 1710 aa16.69■□□□□ 0.26
SNCA-207ENST00000502987 ABCC3O15438 1527 aa16.69■□□□□ 0.26
SNCA-207ENST00000502987 DUOX2Q9NRD8 1548 aa16.69■□□□□ 0.26
SNCA-207ENST00000502987 KIF15Q9NS87 1388 aa16.68■□□□□ 0.26
SNCA-207ENST00000502987 ABCB7O75027 752 aa16.67■□□□□ 0.26
SNCA-207ENST00000502987 CROCC2H7BZ55 1655 aa16.66■□□□□ 0.26
SNCA-207ENST00000502987 ABCC5O15440 1437 aa16.66■□□□□ 0.26
SNCA-207ENST00000502987 DAPK1P53355 1430 aa16.64■□□□□ 0.25
SNCA-207ENST00000502987 FGD6Q6ZV73 1430 aa16.64■□□□□ 0.25
SNCA-207ENST00000502987 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
SNCA-207ENST00000502987 NEURL4Q96JN8 1562 aa16.64■□□□□ 0.25
SNCA-207ENST00000502987 KANK1Q14678 1352 aa16.64■□□□□ 0.25
SNCA-207ENST00000502987 ERVK-7P63135 1459 aa16.63■□□□□ 0.25
SNCA-207ENST00000502987 SHANK2Q9UPX8 1470 aa16.63■□□□□ 0.25
SNCA-207ENST00000502987 FAM50AQ14320 339 aaKnown RBP16.63■□□□□ 0.25
SNCA-207ENST00000502987 MROH1Q8NDA8 1641 aa16.63■□□□□ 0.25
SNCA-207ENST00000502987 NPHP4O75161 1426 aaPredicted RBP16.62■□□□□ 0.25
SNCA-207ENST00000502987 PIP4K2BP78356 416 aa16.62■□□□□ 0.25
SNCA-207ENST00000502987 SPATA31D1Q6ZQQ2 1576 aa16.62■□□□□ 0.25
SNCA-207ENST00000502987 ANKRD30AQ9BXX3 1397 aa16.62■□□□□ 0.25
SNCA-207ENST00000502987 ERBINQ96RT1 1412 aa16.62■□□□□ 0.25
SNCA-207ENST00000502987 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
SNCA-207ENST00000502987 TOM1O60784 492 aa16.6■□□□□ 0.25
SNCA-207ENST00000502987 CPS1P31327 1500 aa16.6■□□□□ 0.25
SNCA-207ENST00000502987 DEPDC5O75140 1603 aa16.59■□□□□ 0.25
SNCA-207ENST00000502987 IQGAP1P46940 1657 aa16.59■□□□□ 0.25
SNCA-207ENST00000502987 UBR1Q8IWV7 1749 aa16.57■□□□□ 0.24
SNCA-207ENST00000502987 MED14O60244 1454 aa16.57■□□□□ 0.24
SNCA-207ENST00000502987 TXNDC2Q86VQ3 553 aa16.57■□□□□ 0.24
SNCA-207ENST00000502987 PRDM15P57071 1507 aaPredicted RBP16.56■□□□□ 0.24
SNCA-207ENST00000502987 EID1Q9Y6B2 187 aa16.56■□□□□ 0.24
SNCA-207ENST00000502987 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
SNCA-207ENST00000502987 VWDEQ8N2E2 1590 aa16.55■□□□□ 0.24
SNCA-207ENST00000502987 ARHGAP31Q2M1Z3 1444 aa16.54■□□□□ 0.24
SNCA-207ENST00000502987 ILDR2Q71H61 639 aa16.54■□□□□ 0.24
SNCA-207ENST00000502987 LTKP29376 864 aa16.52■□□□□ 0.24
SNCA-207ENST00000502987 SCAF11Q99590 1463 aaKnown RBP16.52■□□□□ 0.23
SNCA-207ENST00000502987 HSPA1LP34931 641 aa16.51■□□□□ 0.23
SNCA-207ENST00000502987 PIK3C2BO00750 1634 aa16.51■□□□□ 0.23
SNCA-207ENST00000502987 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
SNCA-207ENST00000502987 IDI1Q13907 227 aa16.49■□□□□ 0.23
SNCA-207ENST00000502987 POTEHQ6S545 545 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms