RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 DEPDC5O75140 1603 aa13.27□□□□□ -0.29
NR1I3-216ENST00000502848 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.29
NR1I3-216ENST00000502848 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
NR1I3-216ENST00000502848 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
NR1I3-216ENST00000502848 FRMPD1Q5SYB0 1578 aa13.24□□□□□ -0.29
NR1I3-216ENST00000502848 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
NR1I3-216ENST00000502848 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
NR1I3-216ENST00000502848 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
NR1I3-216ENST00000502848 VWDEQ8N2E2 1590 aa13.23□□□□□ -0.29
NR1I3-216ENST00000502848 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
NR1I3-216ENST00000502848 A2MP01023 1474 aa13.23□□□□□ -0.29
NR1I3-216ENST00000502848 NUP155O75694 1391 aa13.22□□□□□ -0.29
NR1I3-216ENST00000502848 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
NR1I3-216ENST00000502848 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
NR1I3-216ENST00000502848 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
NR1I3-216ENST00000502848 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
NR1I3-216ENST00000502848 DIP2CQ9Y2E4 1556 aa13.2□□□□□ -0.3
NR1I3-216ENST00000502848 ATP10AO60312 1499 aa13.2□□□□□ -0.3
NR1I3-216ENST00000502848 ABCA6Q8N139 1617 aa13.2□□□□□ -0.3
NR1I3-216ENST00000502848 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
NR1I3-216ENST00000502848 KANK1Q14678 1352 aa13.19□□□□□ -0.3
NR1I3-216ENST00000502848 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
NR1I3-216ENST00000502848 AGLP35573 1532 aa13.17□□□□□ -0.3
NR1I3-216ENST00000502848 MROH1Q8NDA8 1641 aa13.17□□□□□ -0.3
NR1I3-216ENST00000502848 TET3O43151 1660 aa13.16□□□□□ -0.3
NR1I3-216ENST00000502848 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
NR1I3-216ENST00000502848 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
NR1I3-216ENST00000502848 PKD2Q13563 968 aa13.14□□□□□ -0.31
NR1I3-216ENST00000502848 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
NR1I3-216ENST00000502848 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
NR1I3-216ENST00000502848 TONSLQ96HA7 1378 aa13.13□□□□□ -0.31
NR1I3-216ENST00000502848 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
NR1I3-216ENST00000502848 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
NR1I3-216ENST00000502848 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
NR1I3-216ENST00000502848 YEATS2Q9ULM3 1422 aa13.11□□□□□ -0.31
NR1I3-216ENST00000502848 KIF3BO15066 747 aa13.1□□□□□ -0.31
NR1I3-216ENST00000502848 PTPRTO14522 1441 aa13.1□□□□□ -0.31
NR1I3-216ENST00000502848 TRPM2O94759 1503 aa13.09□□□□□ -0.31
NR1I3-216ENST00000502848 ARHGAP31Q2M1Z3 1444 aa13.09□□□□□ -0.31
NR1I3-216ENST00000502848 COL17A1Q9UMD9 1497 aaPredicted RBP13.09□□□□□ -0.31
NR1I3-216ENST00000502848 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
NR1I3-216ENST00000502848 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
NR1I3-216ENST00000502848 E9PCH4 1651 aa13.07□□□□□ -0.32
NR1I3-216ENST00000502848 ABCC3O15438 1527 aa13.07□□□□□ -0.32
NR1I3-216ENST00000502848 PLA2R1Q13018 1463 aa13.06□□□□□ -0.32
NR1I3-216ENST00000502848 PPP1R15AO75807 674 aaPredicted RBP13.06□□□□□ -0.32
NR1I3-216ENST00000502848 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
NR1I3-216ENST00000502848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.32
NR1I3-216ENST00000502848 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
NR1I3-216ENST00000502848 SPHKAPQ2M3C7 1700 aa13.04□□□□□ -0.32
NR1I3-216ENST00000502848 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
NR1I3-216ENST00000502848 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.32
NR1I3-216ENST00000502848 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
NR1I3-216ENST00000502848 UHRF1BP1Q6BDS2 1440 aa13.02□□□□□ -0.33
NR1I3-216ENST00000502848 CEP152O94986 1710 aa13.01□□□□□ -0.33
NR1I3-216ENST00000502848 NPATQ14207 1427 aa13□□□□□ -0.33
NR1I3-216ENST00000502848 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
NR1I3-216ENST00000502848 NOS1P29475 1434 aa12.99□□□□□ -0.33
NR1I3-216ENST00000502848 WASHC2CQ9Y4E1 1318 aa12.99□□□□□ -0.33
NR1I3-216ENST00000502848 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
NR1I3-216ENST00000502848 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
NR1I3-216ENST00000502848 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
NR1I3-216ENST00000502848 GGT6Q6P531 493 aa12.97□□□□□ -0.33
NR1I3-216ENST00000502848 CLTCL1P53675 1640 aa12.96□□□□□ -0.33
NR1I3-216ENST00000502848 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
NR1I3-216ENST00000502848 KCNA4P22459 653 aa12.96□□□□□ -0.33
NR1I3-216ENST00000502848 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
NR1I3-216ENST00000502848 ADGRB3O60242 1522 aa12.94□□□□□ -0.34
NR1I3-216ENST00000502848 MROH2AA6NES4 1674 aa12.94□□□□□ -0.34
NR1I3-216ENST00000502848 RALGAPBQ86X10 1494 aa12.94□□□□□ -0.34
NR1I3-216ENST00000502848 SIGLEC1Q9BZZ2 1709 aa12.93□□□□□ -0.34
NR1I3-216ENST00000502848 MYOM2P54296 1465 aa12.92□□□□□ -0.34
NR1I3-216ENST00000502848 SPATA31D1Q6ZQQ2 1576 aa12.92□□□□□ -0.34
NR1I3-216ENST00000502848 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
NR1I3-216ENST00000502848 SLC52A1Q9NWF4 448 aa12.92□□□□□ -0.34
NR1I3-216ENST00000502848 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
NR1I3-216ENST00000502848 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
NR1I3-216ENST00000502848 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
NR1I3-216ENST00000502848 LAMC1P11047 1609 aa12.91□□□□□ -0.34
NR1I3-216ENST00000502848 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
NR1I3-216ENST00000502848 SYNMO15061 1565 aa12.9□□□□□ -0.34
NR1I3-216ENST00000502848 KIF1BO60333 1816 aa12.9□□□□□ -0.34
NR1I3-216ENST00000502848 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
NR1I3-216ENST00000502848 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
NR1I3-216ENST00000502848 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
NR1I3-216ENST00000502848 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
NR1I3-216ENST00000502848 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
NR1I3-216ENST00000502848 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
NR1I3-216ENST00000502848 IFT172Q9UG01 1749 aa12.86□□□□□ -0.35
NR1I3-216ENST00000502848 DCAF11Q8TEB1 546 aa12.86□□□□□ -0.35
NR1I3-216ENST00000502848 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
NR1I3-216ENST00000502848 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
NR1I3-216ENST00000502848 TRPM1Q7Z4N2 1603 aa12.86□□□□□ -0.35
NR1I3-216ENST00000502848 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
NR1I3-216ENST00000502848 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
NR1I3-216ENST00000502848 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
NR1I3-216ENST00000502848 UGGT1Q9NYU2 1555 aa12.85□□□□□ -0.35
NR1I3-216ENST00000502848 ZMYM3Q14202 1370 aa12.84□□□□□ -0.35
NR1I3-216ENST00000502848 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
NR1I3-216ENST00000502848 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms