RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 PLA2R1Q13018 1463 aa27.08■■□□□ 1.93
UBE2D3-213ENST00000502690 TCOF1Q13428 1488 aaKnown RBP27.08■■□□□ 1.93
UBE2D3-213ENST00000502690 RNF17Q9BXT8 1623 aaKnown RBP27.06■■□□□ 1.92
UBE2D3-213ENST00000502690 A2ML1A8K2U0 1454 aa27.06■■□□□ 1.92
UBE2D3-213ENST00000502690 FAM135AQ9P2D6 1515 aa27.06■■□□□ 1.92
UBE2D3-213ENST00000502690 RSPH4AQ5TD94 716 aa27.05■■□□□ 1.92
UBE2D3-213ENST00000502690 MYOM3Q5VTT5 1437 aa27.05■■□□□ 1.92
UBE2D3-213ENST00000502690 PZPP20742 1482 aa27.05■■□□□ 1.92
UBE2D3-213ENST00000502690 FBXO31Q5XUX0 539 aaPredicted RBP27.04■■□□□ 1.92
UBE2D3-213ENST00000502690 POLR1AO95602 1720 aaPredicted RBP27.02■■□□□ 1.92
UBE2D3-213ENST00000502690 MROH1Q8NDA8 1641 aa27.01■■□□□ 1.92
UBE2D3-213ENST00000502690 CROCC2H7BZ55 1655 aa27■■□□□ 1.91
UBE2D3-213ENST00000502690 MIA2Q96PC5 1412 aa26.99■■□□□ 1.91
UBE2D3-213ENST00000502690 TNRQ92752 1358 aa26.99■■□□□ 1.91
UBE2D3-213ENST00000502690 ZNF335Q9H4Z2 1342 aaPredicted RBP26.99■■□□□ 1.91
UBE2D3-213ENST00000502690 EIF2AK4Q9P2K8 1649 aaKnown RBP26.99■■□□□ 1.91
UBE2D3-213ENST00000502690 NEURL4Q96JN8 1562 aa26.99■■□□□ 1.91
UBE2D3-213ENST00000502690 CEP152O94986 1710 aa26.99■■□□□ 1.91
UBE2D3-213ENST00000502690 TSPY4P0CV99 314 aa26.98■■□□□ 1.91
UBE2D3-213ENST00000502690 TSPY10P0CW01 314 aa26.98■■□□□ 1.91
UBE2D3-213ENST00000502690 ABCC3O15438 1527 aa26.97■■□□□ 1.91
UBE2D3-213ENST00000502690 ZC3H13Q5T200 1668 aaKnown RBP26.97■■□□□ 1.91
UBE2D3-213ENST00000502690 WASHC2CQ9Y4E1 1318 aa26.96■■□□□ 1.91
UBE2D3-213ENST00000502690 IQSEC2Q5JU85 1478 aa26.95■■□□□ 1.91
UBE2D3-213ENST00000502690 PKD2Q13563 968 aa26.95■■□□□ 1.9
UBE2D3-213ENST00000502690 PTPN23Q9H3S7 1636 aa26.94■■□□□ 1.9
UBE2D3-213ENST00000502690 CFAP65Q6ZU64 1925 aaKnown RBP26.92■■□□□ 1.9
UBE2D3-213ENST00000502690 SPATA31D1Q6ZQQ2 1576 aa26.88■■□□□ 1.89
UBE2D3-213ENST00000502690 DUOX2Q9NRD8 1548 aa26.88■■□□□ 1.89
UBE2D3-213ENST00000502690 ABCC5O15440 1437 aa26.88■■□□□ 1.89
UBE2D3-213ENST00000502690 NLRP1Q9C000 1473 aa26.87■■□□□ 1.89
UBE2D3-213ENST00000502690 UGGT1Q9NYU2 1555 aa26.86■■□□□ 1.89
UBE2D3-213ENST00000502690 SHANK2Q9UPX8 1470 aa26.86■■□□□ 1.89
UBE2D3-213ENST00000502690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.85■■□□□ 1.891e-10■■■□□ 14.9
UBE2D3-213ENST00000502690 ERVK-7P63135 1459 aa26.84■■□□□ 1.89
UBE2D3-213ENST00000502690 PRDM15P57071 1507 aaPredicted RBP26.84■■□□□ 1.89
UBE2D3-213ENST00000502690 FGD6Q6ZV73 1430 aa26.82■■□□□ 1.88
UBE2D3-213ENST00000502690 KIF15Q9NS87 1388 aa26.82■■□□□ 1.88
UBE2D3-213ENST00000502690 DAPK1P53355 1430 aa26.82■■□□□ 1.88
UBE2D3-213ENST00000502690 DEPDC5O75140 1603 aa26.81■■□□□ 1.88
UBE2D3-213ENST00000502690 VWDEQ8N2E2 1590 aa26.8■■□□□ 1.88
UBE2D3-213ENST00000502690 UBR1Q8IWV7 1749 aa26.79■■□□□ 1.88
UBE2D3-213ENST00000502690 IQGAP1P46940 1657 aa26.78■■□□□ 1.88
UBE2D3-213ENST00000502690 ERBINQ96RT1 1412 aa26.76■■□□□ 1.87
UBE2D3-213ENST00000502690 STRCP1A6NGW2 1772 aa26.76■■□□□ 1.87
UBE2D3-213ENST00000502690 MED14O60244 1454 aa26.75■■□□□ 1.87
UBE2D3-213ENST00000502690 RRP7BPQ9NSQ0 103 aa26.75■■□□□ 1.87
UBE2D3-213ENST00000502690 APLP2Q06481 763 aa26.74■■□□□ 1.87
UBE2D3-213ENST00000502690 NPHP4O75161 1426 aaPredicted RBP26.73■■□□□ 1.87
UBE2D3-213ENST00000502690 UBAP1LF5GYI3 381 aa26.73■■□□□ 1.87
UBE2D3-213ENST00000502690 THEMISQ8N1K5 641 aaPredicted RBP26.73■■□□□ 1.87
UBE2D3-213ENST00000502690 ANKLE2Q86XL3 938 aa26.72■■□□□ 1.87
UBE2D3-213ENST00000502690 DISP3Q9P2K9 1392 aa26.71■■□□□ 1.87
UBE2D3-213ENST00000502690 CPS1P31327 1500 aa26.71■■□□□ 1.87
UBE2D3-213ENST00000502690 ARHGAP31Q2M1Z3 1444 aa26.68■■□□□ 1.86
UBE2D3-213ENST00000502690 PIK3C2BO00750 1634 aa26.68■■□□□ 1.86
UBE2D3-213ENST00000502690 CHIC2Q9UKJ5 165 aa26.67■■□□□ 1.86
UBE2D3-213ENST00000502690 ALKQ9UM73 1620 aa26.66■■□□□ 1.86
UBE2D3-213ENST00000502690 ILDR2Q71H61 639 aa26.66■■□□□ 1.86
UBE2D3-213ENST00000502690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.64■■□□□ 1.86
UBE2D3-213ENST00000502690 ARHGAP23Q9P227 1491 aa26.62■■□□□ 1.85
UBE2D3-213ENST00000502690 ADGRL2O95490 1459 aa26.62■■□□□ 1.85
UBE2D3-213ENST00000502690 ANKRD30AQ9BXX3 1397 aa26.61■■□□□ 1.85
UBE2D3-213ENST00000502690 LMTK2Q8IWU2 1503 aa26.61■■□□□ 1.85
UBE2D3-213ENST00000502690 SYNMO15061 1565 aa26.61■■□□□ 1.85
UBE2D3-213ENST00000502690 SLIT1O75093 1534 aa26.6■■□□□ 1.85
UBE2D3-213ENST00000502690 SCAF11Q99590 1463 aaKnown RBP26.6■■□□□ 1.85
UBE2D3-213ENST00000502690 EFCAB6Q5THR3 1501 aa26.58■■□□□ 1.85
UBE2D3-213ENST00000502690 LTKP29376 864 aa26.56■■□□□ 1.84
UBE2D3-213ENST00000502690 LRRC7Q96NW7 1537 aa26.55■■□□□ 1.84
UBE2D3-213ENST00000502690 XIRP1Q702N8 1843 aaKnown RBP26.55■■□□□ 1.84
UBE2D3-213ENST00000502690 KDM5AP29375 1690 aaKnown RBP26.54■■□□□ 1.84
UBE2D3-213ENST00000502690 PIP4K2BP78356 416 aa26.54■■□□□ 1.84
UBE2D3-213ENST00000502690 KANK1Q14678 1352 aa26.54■■□□□ 1.84
UBE2D3-213ENST00000502690 FAM50AQ14320 339 aaKnown RBP26.53■■□□□ 1.84
UBE2D3-213ENST00000502690 SCAF1Q9H7N4 1312 aaKnown RBP26.52■■□□□ 1.84
UBE2D3-213ENST00000502690 HSPA1LP34931 641 aa26.5■■□□□ 1.83
UBE2D3-213ENST00000502690 MYO5BQ9ULV0 1848 aa26.5■■□□□ 1.83
UBE2D3-213ENST00000502690 NOS1P29475 1434 aa26.49■■□□□ 1.83
UBE2D3-213ENST00000502690 TMEM2Q9UHN6 1383 aa26.48■■□□□ 1.83
UBE2D3-213ENST00000502690 TXNDC2Q86VQ3 553 aa26.48■■□□□ 1.83
UBE2D3-213ENST00000502690 ANKRD50Q9ULJ7 1429 aa26.48■■□□□ 1.83
UBE2D3-213ENST00000502690 ADGRB3O60242 1522 aa26.47■■□□□ 1.83
UBE2D3-213ENST00000502690 TOM1O60784 492 aa26.46■■□□□ 1.83
UBE2D3-213ENST00000502690 IDI1Q13907 227 aa26.46■■□□□ 1.83
UBE2D3-213ENST00000502690 TET3O43151 1660 aa26.46■■□□□ 1.83
UBE2D3-213ENST00000502690 UNC13BO14795 1591 aa26.45■■□□□ 1.82
UBE2D3-213ENST00000502690 GCC2Q8IWJ2 1684 aa26.44■■□□□ 1.82
UBE2D3-213ENST00000502690 MED1Q15648 1581 aaPredicted RBP26.43■■□□□ 1.82
UBE2D3-213ENST00000502690 E9PCH4 1651 aa26.39■■□□□ 1.82
UBE2D3-213ENST00000502690 STAG3Q9UJ98 1225 aa26.38■■□□□ 1.81
UBE2D3-213ENST00000502690 EID1Q9Y6B2 187 aa26.38■■□□□ 1.81
UBE2D3-213ENST00000502690 RPRD2Q5VT52 1461 aaKnown RBP26.37■■□□□ 1.81
UBE2D3-213ENST00000502690 SOCS7O14512 581 aa26.36■■□□□ 1.81
UBE2D3-213ENST00000502690 TMEM131LA2VDJ0 1609 aa26.35■■□□□ 1.81
UBE2D3-213ENST00000502690 IQGAP3Q86VI3 1631 aa26.34■■□□□ 1.81
UBE2D3-213ENST00000502690 PPARGC1BQ86YN6 1023 aaKnown RBP26.33■■□□□ 1.81
UBE2D3-213ENST00000502690 SENP3Q9H4L4 574 aaPredicted RBP26.33■■□□□ 1.81
UBE2D3-213ENST00000502690 NWD1Q149M9 1564 aa26.31■■□□□ 1.8
UBE2D3-213ENST00000502690 ZFYVE9O95405 1425 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms