RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
FN1-227ENST00000498719 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
FN1-227ENST00000498719 WDR62O43379 1518 aa12.34□□□□□ -0.43
FN1-227ENST00000498719 GCC2Q8IWJ2 1684 aa12.33□□□□□ -0.43
FN1-227ENST00000498719 WDR70Q9NW82 654 aa12.33□□□□□ -0.43
FN1-227ENST00000498719 RNF25Q96BH1 459 aaPredicted RBP12.3□□□□□ -0.44
FN1-227ENST00000498719 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
FN1-227ENST00000498719 ZNF644Q9H582 1327 aaPredicted RBP12.3□□□□□ -0.44
FN1-227ENST00000498719 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
FN1-227ENST00000498719 ZMYND10O75800 440 aa12.29□□□□□ -0.44
FN1-227ENST00000498719 CLUAP1Q96AJ1 413 aa12.29□□□□□ -0.44
FN1-227ENST00000498719 MPHOSPH9Q99550 1183 aa12.29□□□□□ -0.44
FN1-227ENST00000498719 MIA2Q96PC5 1412 aa12.28□□□□□ -0.44
FN1-227ENST00000498719 DISP1Q96F81 1524 aa12.28□□□□□ -0.44
FN1-227ENST00000498719 HSPA5P11021 654 aaKnown RBP12.27□□□□□ -0.44
FN1-227ENST00000498719 IRF5Q13568 498 aa12.27□□□□□ -0.45
FN1-227ENST00000498719 KIAA0556O60303 1618 aa12.26□□□□□ -0.45
FN1-227ENST00000498719 WASHC2AQ641Q2 1341 aa12.26□□□□□ -0.45
FN1-227ENST00000498719 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
FN1-227ENST00000498719 NUP153P49790 1475 aaKnown RBP12.26□□□□□ -0.45
FN1-227ENST00000498719 L3MBTL2Q969R5 705 aa12.26□□□□□ -0.45
FN1-227ENST00000498719 BRPF3Q9ULD4 1205 aa12.26□□□□□ -0.45
FN1-227ENST00000498719 AKNAQ7Z591 1439 aa12.25□□□□□ -0.45
FN1-227ENST00000498719 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
FN1-227ENST00000498719 KIAA0586Q9BVV6 1533 aa12.25□□□□□ -0.45
FN1-227ENST00000498719 DAPK1P53355 1430 aa12.24□□□□□ -0.45
FN1-227ENST00000498719 PPM1GO15355 546 aaPredicted RBP12.23□□□□□ -0.45
FN1-227ENST00000498719 EIF4G3O43432 1585 aaKnown RBP12.23□□□□□ -0.45
FN1-227ENST00000498719 ABCC5O15440 1437 aa12.23□□□□□ -0.45
FN1-227ENST00000498719 KDM4CQ9H3R0 1056 aa12.23□□□□□ -0.45
FN1-227ENST00000498719 GRIN2AQ12879 1464 aa12.23□□□□□ -0.45
FN1-227ENST00000498719 TRAK2O60296 914 aa12.22□□□□□ -0.45
FN1-227ENST00000498719 RETREG2Q8NC44 543 aa12.22□□□□□ -0.45
FN1-227ENST00000498719 RAPGEF6Q8TEU7 1601 aa12.22□□□□□ -0.45
FN1-227ENST00000498719 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
FN1-227ENST00000498719 RSPH4AQ5TD94 716 aa12.22□□□□□ -0.45
FN1-227ENST00000498719 ZFP91Q96JP5 570 aaPredicted RBP12.22□□□□□ -0.45
FN1-227ENST00000498719 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
FN1-227ENST00000498719 EIF4G2P78344 907 aaKnown RBP eCLIP12.21□□□□□ -0.46
FN1-227ENST00000498719 PRG4Q92954 1404 aaPredicted RBP12.21□□□□□ -0.46
FN1-227ENST00000498719 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
FN1-227ENST00000498719 IRX6P78412 446 aaPredicted RBP12.2□□□□□ -0.46
FN1-227ENST00000498719 NBPF8Q3BBV2 869 aa12.2□□□□□ -0.46
FN1-227ENST00000498719 ANKRD30BQ9BXX2 1392 aa12.19□□□□□ -0.46
FN1-227ENST00000498719 CERS3Q8IU89 383 aa12.19□□□□□ -0.46
FN1-227ENST00000498719 PLB1Q6P1J6 1458 aa12.19□□□□□ -0.46
FN1-227ENST00000498719 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
FN1-227ENST00000498719 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
FN1-227ENST00000498719 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
FN1-227ENST00000498719 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
FN1-227ENST00000498719 SEMA3EO15041 775 aa12.17□□□□□ -0.46
FN1-227ENST00000498719 NEFLP07196 543 aa12.17□□□□□ -0.46
FN1-227ENST00000498719 CHMP7Q8WUX9 453 aaPredicted RBP12.17□□□□□ -0.46
FN1-227ENST00000498719 ZNF592Q92610 1267 aa12.17□□□□□ -0.46
FN1-227ENST00000498719 RPRD2Q5VT52 1461 aaKnown RBP12.17□□□□□ -0.46
FN1-227ENST00000498719 CEP170Q5SW79 1584 aa12.17□□□□□ -0.46
FN1-227ENST00000498719 KIF14Q15058 1648 aa12.16□□□□□ -0.46
FN1-227ENST00000498719 CFDP1Q9UEE9 299 aaPredicted RBP12.16□□□□□ -0.46
FN1-227ENST00000498719 TEX14Q8IWB6 1497 aa12.16□□□□□ -0.46
FN1-227ENST00000498719 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
FN1-227ENST00000498719 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
FN1-227ENST00000498719 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
FN1-227ENST00000498719 ERCC6Q03468 1493 aa12.15□□□□□ -0.46
FN1-227ENST00000498719 CAMSAP2Q08AD1 1489 aa12.15□□□□□ -0.46
FN1-227ENST00000498719 CADPS2Q86UW7 1296 aa12.15□□□□□ -0.46
FN1-227ENST00000498719 TROQ12816 1431 aaPredicted RBP12.15□□□□□ -0.46
FN1-227ENST00000498719 TMED8Q6PL24 325 aaPredicted RBP12.15□□□□□ -0.47
FN1-227ENST00000498719 BARGINQ6ZT62 677 aa12.15□□□□□ -0.47
FN1-227ENST00000498719 CNTLNQ9NXG0 1405 aa12.14□□□□□ -0.47
FN1-227ENST00000498719 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
FN1-227ENST00000498719 POLA2Q14181 598 aa12.13□□□□□ -0.47
FN1-227ENST00000498719 CCDC7Q96M83 1385 aa12.13□□□□□ -0.47
FN1-227ENST00000498719 GPATCH8Q9UKJ3 1502 aaKnown RBP12.13□□□□□ -0.47
FN1-227ENST00000498719 NCOA1Q15788 1441 aa12.13□□□□□ -0.47
FN1-227ENST00000498719 PZPP20742 1482 aa12.13□□□□□ -0.47
FN1-227ENST00000498719 BCCIPQ9P287 314 aaKnown RBP eCLIP12.12□□□□□ -0.47
FN1-227ENST00000498719 SYNJ2O15056 1496 aa12.11□□□□□ -0.47
FN1-227ENST00000498719 MAGI1Q96QZ7 1491 aaPredicted RBP12.11□□□□□ -0.47
FN1-227ENST00000498719 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
FN1-227ENST00000498719 ITSN2Q9NZM3 1697 aa12.11□□□□□ -0.47
FN1-227ENST00000498719 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
FN1-227ENST00000498719 ZNF326Q5BKZ1 582 aaKnown RBP12.1□□□□□ -0.47
FN1-227ENST00000498719 CCDC125Q86Z20 511 aa12.1□□□□□ -0.47
FN1-227ENST00000498719 KIF7Q2M1P5 1343 aa12.1□□□□□ -0.47
FN1-227ENST00000498719 SPATA31E1Q6ZUB1 1445 aa12.09□□□□□ -0.47
FN1-227ENST00000498719 ADGBQ8N7X0 1667 aa12.09□□□□□ -0.47
FN1-227ENST00000498719 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
FN1-227ENST00000498719 FAM9BQ8IZU0 186 aa12.09□□□□□ -0.47
FN1-227ENST00000498719 A6NJR5 290 aa12.09□□□□□ -0.47
FN1-227ENST00000498719 FAM117AQ9C073 453 aa12.08□□□□□ -0.48
FN1-227ENST00000498719 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.08□□□□□ -0.48
FN1-227ENST00000498719 CROCC2H7BZ55 1655 aa12.08□□□□□ -0.48
FN1-227ENST00000498719 FLIIQ13045 1269 aa12.08□□□□□ -0.48
FN1-227ENST00000498719 ADCY10Q96PN6 1610 aa12.07□□□□□ -0.48
FN1-227ENST00000498719 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
FN1-227ENST00000498719 CDC42BPAQ5VT25 1732 aa12.07□□□□□ -0.48
FN1-227ENST00000498719 CARMIL2Q6F5E8 1435 aa12.07□□□□□ -0.48
FN1-227ENST00000498719 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
FN1-227ENST00000498719 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
FN1-227ENST00000498719 NUP160Q12769 1436 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms