RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 ITSN2Q9NZM3 1697 aa8.88□□□□□ -0.99
CSTF1-207ENST00000498689 RXRBP28702 533 aa8.88□□□□□ -0.99
CSTF1-207ENST00000498689 CDK13Q14004 1512 aaKnown RBP8.86□□□□□ -0.99
CSTF1-207ENST00000498689 ESF1Q9H501 851 aaKnown RBP8.86□□□□□ -0.99
CSTF1-207ENST00000498689 SLC4A1APQ9BWU0 796 aaKnown RBP8.85□□□□□ -0.99
CSTF1-207ENST00000498689 FAM135BQ49AJ0 1406 aa8.85□□□□□ -0.99
CSTF1-207ENST00000498689 UTRNP46939 3433 aa8.85□□□□□ -0.99
CSTF1-207ENST00000498689 KDM5CP41229 1560 aa8.85□□□□□ -0.99
CSTF1-207ENST00000498689 COL16A1Q07092 1604 aaPredicted RBP8.84□□□□□ -0.99
CSTF1-207ENST00000498689 ZNF772Q68DY9 489 aaPredicted RBP8.84□□□□□ -0.99
CSTF1-207ENST00000498689 KIF27Q86VH2 1401 aa8.84□□□□□ -0.99
CSTF1-207ENST00000498689 ZC3H13Q5T200 1668 aaKnown RBP8.84□□□□□ -0.99
CSTF1-207ENST00000498689 ADGBQ8N7X0 1667 aa8.84□□□□□ -0.99
CSTF1-207ENST00000498689 ZMYM3Q14202 1370 aa8.84□□□□□ -0.99
CSTF1-207ENST00000498689 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
CSTF1-207ENST00000498689 NUTM2BA6NNL0 878 aaPredicted RBP8.83□□□□□ -1
CSTF1-207ENST00000498689 NUTM2EB1AL46 878 aaPredicted RBP8.83□□□□□ -1
CSTF1-207ENST00000498689 NUTM2DQ5VT03 806 aaPredicted RBP8.83□□□□□ -1
CSTF1-207ENST00000498689 NUTM2AQ8IVF1 878 aaPredicted RBP8.83□□□□□ -1
CSTF1-207ENST00000498689 MYO5CQ9NQX4 1742 aa8.83□□□□□ -1
CSTF1-207ENST00000498689 DEPDC5O75140 1603 aa8.82□□□□□ -1
CSTF1-207ENST00000498689 NHSL1Q5SYE7 1610 aa8.82□□□□□ -1
CSTF1-207ENST00000498689 A2ML1A8K2U0 1454 aa8.82□□□□□ -1
CSTF1-207ENST00000498689 SHPRHQ149N8 1683 aa8.81□□□□□ -1
CSTF1-207ENST00000498689 KIDINS220Q9ULH0 1771 aa8.81□□□□□ -1
CSTF1-207ENST00000498689 MEX3CQ5U5Q3 659 aaKnown RBP8.8□□□□□ -1
CSTF1-207ENST00000498689 GOLGA3Q08378 1498 aa8.79□□□□□ -1
CSTF1-207ENST00000498689 JCADQ9P266 1359 aa8.79□□□□□ -1
CSTF1-207ENST00000498689 PLCH2O75038 1416 aa8.79□□□□□ -1
CSTF1-207ENST00000498689 NPHP4O75161 1426 aaPredicted RBP8.79□□□□□ -1
CSTF1-207ENST00000498689 MED14O60244 1454 aa8.78□□□□□ -1
CSTF1-207ENST00000498689 AFAP1Q8N556 730 aa8.78□□□□□ -1
CSTF1-207ENST00000498689 FOXD4L1Q9NU39 408 aa8.78□□□□□ -1
CSTF1-207ENST00000498689 ATF5Q9Y2D1 282 aaPredicted RBP8.78□□□□□ -1
CSTF1-207ENST00000498689 ABCC1P33527 1531 aa8.78□□□□□ -1
CSTF1-207ENST00000498689 SLC34A2O95436 690 aa8.77□□□□□ -1.01
CSTF1-207ENST00000498689 CHRDL2Q6WN34 429 aa8.77□□□□□ -1.01
CSTF1-207ENST00000498689 CAMTA1Q9Y6Y1 1673 aa8.77□□□□□ -1.01
CSTF1-207ENST00000498689 ZNF518AQ6AHZ1 1483 aa8.77□□□□□ -1.01
CSTF1-207ENST00000498689 ATAD2Q6PL18 1390 aa8.76□□□□□ -1.01
CSTF1-207ENST00000498689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.76□□□□□ -1.01
CSTF1-207ENST00000498689 MYT1LQ9UL68 1186 aa8.75□□□□□ -1.01
CSTF1-207ENST00000498689 NUP153P49790 1475 aaKnown RBP8.75□□□□□ -1.01
CSTF1-207ENST00000498689 AFF2P51816 1311 aa8.75□□□□□ -1.01
CSTF1-207ENST00000498689 PSDA5PKW4 1024 aaPredicted RBP8.74□□□□□ -1.01
CSTF1-207ENST00000498689 P3H3Q8IVL6 736 aa8.74□□□□□ -1.01
CSTF1-207ENST00000498689 CHD4Q14839 1912 aa8.74□□□□□ -1.01
CSTF1-207ENST00000498689 BRWD3Q6RI45 1802 aa8.73□□□□□ -1.01
CSTF1-207ENST00000498689 BCL9LQ86UU0 1499 aa8.72□□□□□ -1.01
CSTF1-207ENST00000498689 CDC42BPBQ9Y5S2 1711 aa8.72□□□□□ -1.01
CSTF1-207ENST00000498689 MAP3K1Q13233 1512 aa8.72□□□□□ -1.01
CSTF1-207ENST00000498689 C1QTNF8P60827 252 aa8.72□□□□□ -1.01
CSTF1-207ENST00000498689 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
CSTF1-207ENST00000498689 HRCP23327 699 aa8.71□□□□□ -1.02
CSTF1-207ENST00000498689 MLH3Q9UHC1 1453 aa8.7□□□□□ -1.02
CSTF1-207ENST00000498689 RBM6P78332 1123 aaKnown RBP8.7□□□□□ -1.02
CSTF1-207ENST00000498689 ZNF784Q8NCA9 323 aaPredicted RBP8.7□□□□□ -1.02
CSTF1-207ENST00000498689 QTRT2Q9H974 415 aaKnown RBP8.7□□□□□ -1.02
CSTF1-207ENST00000498689 SPATA31A6Q5VVP1 1343 aa8.7□□□□□ -1.02
CSTF1-207ENST00000498689 DIP2AQ14689 1571 aa8.69□□□□□ -1.02
CSTF1-207ENST00000498689 NWD1Q149M9 1564 aa8.69□□□□□ -1.02
CSTF1-207ENST00000498689 KIF14Q15058 1648 aa8.69□□□□□ -1.02
CSTF1-207ENST00000498689 DEFB132Q7Z7B7 95 aa8.69□□□□□ -1.02
CSTF1-207ENST00000498689 CFAP65Q6ZU64 1925 aaKnown RBP8.68□□□□□ -1.02
CSTF1-207ENST00000498689 ZBTB12Q9Y330 459 aaPredicted RBP8.68□□□□□ -1.02
CSTF1-207ENST00000498689 PLEKHD1A6NEE1 506 aa8.67□□□□□ -1.02
CSTF1-207ENST00000498689 UGGT1Q9NYU2 1555 aa8.67□□□□□ -1.02
CSTF1-207ENST00000498689 LRRC9Q6ZRR7 1453 aa8.66□□□□□ -1.02
CSTF1-207ENST00000498689 FGD6Q6ZV73 1430 aa8.66□□□□□ -1.02
CSTF1-207ENST00000498689 FBXO31Q5XUX0 539 aaPredicted RBP8.66□□□□□ -1.02
CSTF1-207ENST00000498689 KDM5DQ9BY66 1539 aa8.65□□□□□ -1.02
CSTF1-207ENST00000498689 AKT1S1Q96B36 256 aa8.65□□□□□ -1.02
CSTF1-207ENST00000498689 TIAM1Q13009 1591 aa8.65□□□□□ -1.03
CSTF1-207ENST00000498689 SAMD9Q5K651 1589 aa8.65□□□□□ -1.03
CSTF1-207ENST00000498689 TMEM94Q12767 1356 aa8.64□□□□□ -1.03
CSTF1-207ENST00000498689 ATP7AQ04656 1500 aa8.64□□□□□ -1.03
CSTF1-207ENST00000498689 ARHGAP5Q13017 1502 aa8.64□□□□□ -1.03
CSTF1-207ENST00000498689 KDM5AP29375 1690 aaKnown RBP8.63□□□□□ -1.03
CSTF1-207ENST00000498689 AHDC1Q5TGY3 1603 aaPredicted RBP8.63□□□□□ -1.03
CSTF1-207ENST00000498689 EFCAB2Q5VUJ9 269 aa8.63□□□□□ -1.03
CSTF1-207ENST00000498689 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
CSTF1-207ENST00000498689 PLXNC1O60486 1568 aa8.63□□□□□ -1.03
CSTF1-207ENST00000498689 UBR1Q8IWV7 1749 aa8.63□□□□□ -1.03
CSTF1-207ENST00000498689 TNRQ92752 1358 aa8.62□□□□□ -1.03
CSTF1-207ENST00000498689 FAM135AQ9P2D6 1515 aa8.61□□□□□ -1.03
CSTF1-207ENST00000498689 ZBTB22O15209 634 aa8.61□□□□□ -1.03
CSTF1-207ENST00000498689 C8orf37Q96NL8 207 aa8.61□□□□□ -1.03
CSTF1-207ENST00000498689 SCAF11Q99590 1463 aaKnown RBP8.6□□□□□ -1.03
CSTF1-207ENST00000498689 THEMISQ8N1K5 641 aaPredicted RBP8.6□□□□□ -1.03
CSTF1-207ENST00000498689 SLAIN2Q9P270 581 aa8.6□□□□□ -1.03
CSTF1-207ENST00000498689 GGT6Q6P531 493 aa8.59□□□□□ -1.03
CSTF1-207ENST00000498689 REM2Q8IYK8 340 aaPredicted RBP8.59□□□□□ -1.03
CSTF1-207ENST00000498689 BLMP54132 1417 aaPredicted RBP8.59□□□□□ -1.03
CSTF1-207ENST00000498689 SAMD9LQ8IVG5 1584 aa8.59□□□□□ -1.03
CSTF1-207ENST00000498689 PCNTO95613 3336 aa8.59□□□□□ -1.04
CSTF1-207ENST00000498689 EHMT2Q96KQ7 1210 aa8.58□□□□□ -1.04
CSTF1-207ENST00000498689 PCDH10Q9P2E7 1040 aa8.58□□□□□ -1.04
CSTF1-207ENST00000498689 NGLY1Q96IV0 654 aa8.57□□□□□ -1.04
CSTF1-207ENST00000498689 MAST1Q9Y2H9 1570 aa8.56□□□□□ -1.04
CSTF1-207ENST00000498689 GOLGB1Q14789 3259 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms