RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 C1QBPQ07021 282 aaKnown RBP9.69□□□□□ -0.86
FXN-205ENST00000498653 COL16A1Q07092 1604 aaPredicted RBP9.69□□□□□ -0.86
FXN-205ENST00000498653 CARMIL1Q5VZK9 1371 aa9.69□□□□□ -0.86
FXN-205ENST00000498653 SCAPERQ9BY12 1400 aa9.69□□□□□ -0.86
FXN-205ENST00000498653 IQGAP1P46940 1657 aa9.68□□□□□ -0.86
FXN-205ENST00000498653 JCADQ9P266 1359 aa9.68□□□□□ -0.86
FXN-205ENST00000498653 CACNB1Q02641 598 aaPredicted RBP9.68□□□□□ -0.86
FXN-205ENST00000498653 DEPDC5O75140 1603 aa9.67□□□□□ -0.86
FXN-205ENST00000498653 MED14O60244 1454 aa9.67□□□□□ -0.86
FXN-205ENST00000498653 ATAD2Q6PL18 1390 aa9.67□□□□□ -0.86
FXN-205ENST00000498653 BCL9LQ86UU0 1499 aa9.66□□□□□ -0.86
FXN-205ENST00000498653 ZMYM3Q14202 1370 aa9.65□□□□□ -0.86
FXN-205ENST00000498653 CLTCQ00610 1675 aaKnown RBP9.65□□□□□ -0.86
FXN-205ENST00000498653 SHPRHQ149N8 1683 aa9.64□□□□□ -0.87
FXN-205ENST00000498653 NUTM2BA6NNL0 878 aaPredicted RBP9.64□□□□□ -0.87
FXN-205ENST00000498653 NUTM2EB1AL46 878 aaPredicted RBP9.64□□□□□ -0.87
FXN-205ENST00000498653 NUTM2DQ5VT03 806 aaPredicted RBP9.64□□□□□ -0.87
FXN-205ENST00000498653 NUTM2AQ8IVF1 878 aaPredicted RBP9.64□□□□□ -0.87
FXN-205ENST00000498653 PCDH10Q9P2E7 1040 aa9.64□□□□□ -0.87
FXN-205ENST00000498653 NPHP4O75161 1426 aaPredicted RBP9.64□□□□□ -0.87
FXN-205ENST00000498653 ESF1Q9H501 851 aaKnown RBP9.63□□□□□ -0.87
FXN-205ENST00000498653 ZC3H13Q5T200 1668 aaKnown RBP9.63□□□□□ -0.87
FXN-205ENST00000498653 KIF27Q86VH2 1401 aa9.63□□□□□ -0.87
FXN-205ENST00000498653 NWD1Q149M9 1564 aa9.63□□□□□ -0.87
FXN-205ENST00000498653 ITSN2Q9NZM3 1697 aa9.62□□□□□ -0.87
FXN-205ENST00000498653 C1QTNF8P60827 252 aa9.62□□□□□ -0.87
FXN-205ENST00000498653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.62□□□□□ -0.87
FXN-205ENST00000498653 GOLGA3Q08378 1498 aa9.61□□□□□ -0.87
FXN-205ENST00000498653 ZNF518AQ6AHZ1 1483 aa9.61□□□□□ -0.87
FXN-205ENST00000498653 CTTNBP2Q8WZ74 1663 aa9.61□□□□□ -0.87
FXN-205ENST00000498653 SPATA31A6Q5VVP1 1343 aa9.6□□□□□ -0.87
FXN-205ENST00000498653 MEX3CQ5U5Q3 659 aaKnown RBP9.6□□□□□ -0.87
FXN-205ENST00000498653 ABCC1P33527 1531 aa9.6□□□□□ -0.87
FXN-205ENST00000498653 PLCH2O75038 1416 aa9.59□□□□□ -0.87
FXN-205ENST00000498653 UTRNP46939 3433 aa9.59□□□□□ -0.87
FXN-205ENST00000498653 FGD6Q6ZV73 1430 aa9.58□□□□□ -0.88
FXN-205ENST00000498653 ZNF784Q8NCA9 323 aaPredicted RBP9.58□□□□□ -0.88
FXN-205ENST00000498653 LRRC9Q6ZRR7 1453 aa9.58□□□□□ -0.88
FXN-205ENST00000498653 MAP3K1Q13233 1512 aa9.57□□□□□ -0.88
FXN-205ENST00000498653 HRCP23327 699 aa9.57□□□□□ -0.88
FXN-205ENST00000498653 KDM5DQ9BY66 1539 aa9.56□□□□□ -0.88
FXN-205ENST00000498653 AFF2P51816 1311 aa9.56□□□□□ -0.88
FXN-205ENST00000498653 MLH3Q9UHC1 1453 aa9.55□□□□□ -0.88
FXN-205ENST00000498653 RBM6P78332 1123 aaKnown RBP9.55□□□□□ -0.88
FXN-205ENST00000498653 ADGBQ8N7X0 1667 aa9.55□□□□□ -0.88
FXN-205ENST00000498653 KIF14Q15058 1648 aa9.54□□□□□ -0.88
FXN-205ENST00000498653 NUP153P49790 1475 aaKnown RBP9.53□□□□□ -0.88
FXN-205ENST00000498653 KIDINS220Q9ULH0 1771 aa9.53□□□□□ -0.88
FXN-205ENST00000498653 DIP2AQ14689 1571 aa9.53□□□□□ -0.88
FXN-205ENST00000498653 CCDC125Q86Z20 511 aa9.52□□□□□ -0.89
FXN-205ENST00000498653 ZNF219Q9P2Y4 722 aaPredicted RBP9.52□□□□□ -0.89
FXN-205ENST00000498653 ATP7AQ04656 1500 aa9.51□□□□□ -0.89
FXN-205ENST00000498653 MYO5CQ9NQX4 1742 aa9.51□□□□□ -0.89
FXN-205ENST00000498653 PSDA5PKW4 1024 aaPredicted RBP9.51□□□□□ -0.89
FXN-205ENST00000498653 CAPN15O75808 1086 aa9.51□□□□□ -0.89
FXN-205ENST00000498653 ANKLE2Q86XL3 938 aa9.51□□□□□ -0.89
FXN-205ENST00000498653 CAMTA1Q9Y6Y1 1673 aa9.51□□□□□ -0.89
FXN-205ENST00000498653 AFAP1Q8N556 730 aa9.5□□□□□ -0.89
FXN-205ENST00000498653 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
FXN-205ENST00000498653 AHDC1Q5TGY3 1603 aaPredicted RBP9.49□□□□□ -0.89
FXN-205ENST00000498653 SCAF11Q99590 1463 aaKnown RBP9.49□□□□□ -0.89
FXN-205ENST00000498653 DEFB132Q7Z7B7 95 aa9.48□□□□□ -0.89
FXN-205ENST00000498653 QTRT2Q9H974 415 aaKnown RBP9.48□□□□□ -0.89
FXN-205ENST00000498653 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
FXN-205ENST00000498653 UGGT1Q9NYU2 1555 aa9.47□□□□□ -0.89
FXN-205ENST00000498653 TMEM94Q12767 1356 aa9.47□□□□□ -0.89
FXN-205ENST00000498653 PLXNC1O60486 1568 aa9.46□□□□□ -0.89
FXN-205ENST00000498653 SPINK5Q9NQ38 1064 aaPredicted RBP9.46□□□□□ -0.9
FXN-205ENST00000498653 ATF5Q9Y2D1 282 aaPredicted RBP9.46□□□□□ -0.9
FXN-205ENST00000498653 TNRQ92752 1358 aa9.44□□□□□ -0.9
FXN-205ENST00000498653 RTEL1-TNFRSF6BF6WH68 1400 aa9.44□□□□□ -0.9
FXN-205ENST00000498653 FAM135AQ9P2D6 1515 aa9.44□□□□□ -0.9
FXN-205ENST00000498653 NGLY1Q96IV0 654 aa9.42□□□□□ -0.9
FXN-205ENST00000498653 KDM5AP29375 1690 aaKnown RBP9.42□□□□□ -0.9
FXN-205ENST00000498653 UNC13BO14795 1591 aa9.41□□□□□ -0.9
FXN-205ENST00000498653 NLRP1Q9C000 1473 aa9.4□□□□□ -0.9
FXN-205ENST00000498653 MYT1LQ9UL68 1186 aa9.4□□□□□ -0.9
FXN-205ENST00000498653 CHD4Q14839 1912 aa9.4□□□□□ -0.9
FXN-205ENST00000498653 SAMD9Q5K651 1589 aa9.4□□□□□ -0.9
FXN-205ENST00000498653 PLEKHD1A6NEE1 506 aa9.39□□□□□ -0.91
FXN-205ENST00000498653 PRELPP51888 382 aa9.39□□□□□ -0.91
FXN-205ENST00000498653 EFCAB2Q5VUJ9 269 aa9.39□□□□□ -0.91
FXN-205ENST00000498653 THEMISQ8N1K5 641 aaPredicted RBP9.39□□□□□ -0.91
FXN-205ENST00000498653 ABCC3O15438 1527 aa9.39□□□□□ -0.91
FXN-205ENST00000498653 PRDM15P57071 1507 aaPredicted RBP9.39□□□□□ -0.91
FXN-205ENST00000498653 C8orf37Q96NL8 207 aa9.38□□□□□ -0.91
FXN-205ENST00000498653 PZPP20742 1482 aa9.38□□□□□ -0.91
FXN-205ENST00000498653 ATRNO75882 1429 aa9.38□□□□□ -0.91
FXN-205ENST00000498653 MAST1Q9Y2H9 1570 aa9.37□□□□□ -0.91
FXN-205ENST00000498653 ARHGAP5Q13017 1502 aa9.37□□□□□ -0.91
FXN-205ENST00000498653 SPHKAPQ2M3C7 1700 aa9.37□□□□□ -0.91
FXN-205ENST00000498653 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
FXN-205ENST00000498653 BRWD3Q6RI45 1802 aa9.36□□□□□ -0.91
FXN-205ENST00000498653 FBXO31Q5XUX0 539 aaPredicted RBP9.36□□□□□ -0.91
FXN-205ENST00000498653 CDC42BPBQ9Y5S2 1711 aa9.36□□□□□ -0.91
FXN-205ENST00000498653 NINLQ9Y2I6 1382 aa9.35□□□□□ -0.91
FXN-205ENST00000498653 NKTRP30414 1462 aaKnown RBP9.34□□□□□ -0.91
FXN-205ENST00000498653 ARHGAP23Q9P227 1491 aa9.34□□□□□ -0.91
FXN-205ENST00000498653 SAMD9LQ8IVG5 1584 aa9.34□□□□□ -0.91
FXN-205ENST00000498653 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms