RNA–Protein interactions for RNA: ENST00000498627.1

PUM1-212, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-212ENST00000498627 MADDQ8WXG6 1647 aa12.41□□□□□ -0.42
PUM1-212ENST00000498627 ABCC5O15440 1437 aa12.41□□□□□ -0.42
PUM1-212ENST00000498627 TSPY4P0CV99 314 aa12.41□□□□□ -0.42
PUM1-212ENST00000498627 TSPY10P0CW01 314 aa12.41□□□□□ -0.42
PUM1-212ENST00000498627 CCDC141Q6ZP82 1450 aa12.4□□□□□ -0.42
PUM1-212ENST00000498627 KDM5CP41229 1560 aa12.4□□□□□ -0.42
PUM1-212ENST00000498627 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.42
PUM1-212ENST00000498627 ZMYM4Q5VZL5 1548 aa12.4□□□□□ -0.42
PUM1-212ENST00000498627 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
PUM1-212ENST00000498627 HSPA2P54652 639 aa12.39□□□□□ -0.43
PUM1-212ENST00000498627 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
PUM1-212ENST00000498627 KIDINS220Q9ULH0 1771 aa12.38□□□□□ -0.43
PUM1-212ENST00000498627 DAPK1P53355 1430 aa12.38□□□□□ -0.43
PUM1-212ENST00000498627 PTPRKQ15262 1439 aa12.38□□□□□ -0.43
PUM1-212ENST00000498627 MLECQ14165 292 aa12.38□□□□□ -0.43
PUM1-212ENST00000498627 IQSEC2Q5JU85 1478 aa12.38□□□□□ -0.43
PUM1-212ENST00000498627 ARHGEF5Q12774 1597 aa12.38□□□□□ -0.43
PUM1-212ENST00000498627 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
PUM1-212ENST00000498627 RRP7BPQ9NSQ0 103 aa12.37□□□□□ -0.43
PUM1-212ENST00000498627 ATP10AO60312 1499 aa12.37□□□□□ -0.43
PUM1-212ENST00000498627 MAGI2Q86UL8 1455 aa12.37□□□□□ -0.43
PUM1-212ENST00000498627 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
PUM1-212ENST00000498627 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
PUM1-212ENST00000498627 C9orf84Q5VXU9 1444 aa12.37□□□□□ -0.43
PUM1-212ENST00000498627 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
PUM1-212ENST00000498627 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
PUM1-212ENST00000498627 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
PUM1-212ENST00000498627 SIGLEC1Q9BZZ2 1709 aa12.36□□□□□ -0.43
PUM1-212ENST00000498627 ARHGEF40Q8TER5 1519 aa12.36□□□□□ -0.43
PUM1-212ENST00000498627 DIP2CQ9Y2E4 1556 aa12.35□□□□□ -0.43
PUM1-212ENST00000498627 DNMT1P26358 1616 aaKnown RBP12.35□□□□□ -0.43
PUM1-212ENST00000498627 RIMS1Q86UR5 1692 aaKnown RBP12.35□□□□□ -0.43
PUM1-212ENST00000498627 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
PUM1-212ENST00000498627 RTEL1-TNFRSF6BF6WH68 1400 aa12.34□□□□□ -0.43
PUM1-212ENST00000498627 PROM2Q8N271 834 aa12.32□□□□□ -0.44
PUM1-212ENST00000498627 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
PUM1-212ENST00000498627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
PUM1-212ENST00000498627 A2MP01023 1474 aa12.31□□□□□ -0.44
PUM1-212ENST00000498627 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
PUM1-212ENST00000498627 MAST1Q9Y2H9 1570 aa12.3□□□□□ -0.44
PUM1-212ENST00000498627 CROCC2H7BZ55 1655 aa12.3□□□□□ -0.44
PUM1-212ENST00000498627 KIF3BO15066 747 aa12.3□□□□□ -0.44
PUM1-212ENST00000498627 GGT6Q6P531 493 aa12.3□□□□□ -0.44
PUM1-212ENST00000498627 SSUH2Q9Y2M2 353 aa12.3□□□□□ -0.44
PUM1-212ENST00000498627 KIF15Q9NS87 1388 aa12.3□□□□□ -0.44
PUM1-212ENST00000498627 PTPRTO14522 1441 aa12.29□□□□□ -0.44
PUM1-212ENST00000498627 NCOA1Q15788 1441 aa12.29□□□□□ -0.44
PUM1-212ENST00000498627 SHANK2Q9UPX8 1470 aa12.29□□□□□ -0.44
PUM1-212ENST00000498627 ANKRD30AQ9BXX3 1397 aa12.29□□□□□ -0.44
PUM1-212ENST00000498627 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
PUM1-212ENST00000498627 PREX1Q8TCU6 1659 aa12.28□□□□□ -0.44
PUM1-212ENST00000498627 ADGRL2O95490 1459 aa12.26□□□□□ -0.45
PUM1-212ENST00000498627 PLXNC1O60486 1568 aa12.25□□□□□ -0.45
PUM1-212ENST00000498627 AGLP35573 1532 aa12.24□□□□□ -0.45
PUM1-212ENST00000498627 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
PUM1-212ENST00000498627 DUOX2Q9NRD8 1548 aa12.24□□□□□ -0.45
PUM1-212ENST00000498627 REREQ9P2R6 1566 aa12.24□□□□□ -0.45
PUM1-212ENST00000498627 UHRF1BP1Q6BDS2 1440 aa12.23□□□□□ -0.45
PUM1-212ENST00000498627 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
PUM1-212ENST00000498627 CEBPAP49715 358 aaPredicted RBP12.23□□□□□ -0.45
PUM1-212ENST00000498627 SETD1BQ9UPS6 1966 aaKnown RBP12.23□□□□□ -0.45
PUM1-212ENST00000498627 ANKRD50Q9ULJ7 1429 aa12.22□□□□□ -0.45
PUM1-212ENST00000498627 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.45
PUM1-212ENST00000498627 STRCQ7RTU9 1775 aa12.2□□□□□ -0.46
PUM1-212ENST00000498627 ESF1Q9H501 851 aaKnown RBP12.2□□□□□ -0.46
PUM1-212ENST00000498627 NAIPQ13075 1403 aa12.2□□□□□ -0.46
PUM1-212ENST00000498627 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
PUM1-212ENST00000498627 WASHC2CQ9Y4E1 1318 aa12.19□□□□□ -0.46
PUM1-212ENST00000498627 LTBP4Q8N2S1 1624 aa12.19□□□□□ -0.46
PUM1-212ENST00000498627 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
PUM1-212ENST00000498627 TRIM52Q96A61 297 aa12.16□□□□□ -0.46
PUM1-212ENST00000498627 HFM1A2PYH4 1435 aa12.16□□□□□ -0.46
PUM1-212ENST00000498627 ZMYM3Q14202 1370 aa12.16□□□□□ -0.46
PUM1-212ENST00000498627 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.46
PUM1-212ENST00000498627 FBXO31Q5XUX0 539 aaPredicted RBP12.15□□□□□ -0.46
PUM1-212ENST00000498627 CLTCQ00610 1675 aaKnown RBP12.15□□□□□ -0.46
PUM1-212ENST00000498627 EIF2AK4Q9P2K8 1649 aaKnown RBP12.15□□□□□ -0.47
PUM1-212ENST00000498627 CFAP65Q6ZU64 1925 aaKnown RBP12.14□□□□□ -0.47
PUM1-212ENST00000498627 NUP155O75694 1391 aa12.14□□□□□ -0.47
PUM1-212ENST00000498627 RNF17Q9BXT8 1623 aaKnown RBP12.14□□□□□ -0.47
PUM1-212ENST00000498627 SETD5Q9C0A6 1442 aa12.13□□□□□ -0.47
PUM1-212ENST00000498627 ABCC3O15438 1527 aa12.12□□□□□ -0.47
PUM1-212ENST00000498627 UBAP1LF5GYI3 381 aa12.12□□□□□ -0.47
PUM1-212ENST00000498627 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
PUM1-212ENST00000498627 KANK1Q14678 1352 aa12.12□□□□□ -0.47
PUM1-212ENST00000498627 GCC2Q8IWJ2 1684 aa12.12□□□□□ -0.47
PUM1-212ENST00000498627 CEP152O94986 1710 aa12.11□□□□□ -0.47
PUM1-212ENST00000498627 RAB3GAP2Q9H2M9 1393 aa12.11□□□□□ -0.47
PUM1-212ENST00000498627 DEPDC5O75140 1603 aa12.11□□□□□ -0.47
PUM1-212ENST00000498627 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
PUM1-212ENST00000498627 CNTLNQ9NXG0 1405 aa12.11□□□□□ -0.47
PUM1-212ENST00000498627 PCGF6Q9BYE7 350 aa12.1□□□□□ -0.47
PUM1-212ENST00000498627 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
PUM1-212ENST00000498627 PRDM15P57071 1507 aaPredicted RBP12.1□□□□□ -0.47
PUM1-212ENST00000498627 C3P01024 1663 aa12.1□□□□□ -0.47
PUM1-212ENST00000498627 UNC13BO14795 1591 aa12.09□□□□□ -0.47
PUM1-212ENST00000498627 VWDEQ8N2E2 1590 aa12.09□□□□□ -0.47
PUM1-212ENST00000498627 MED1Q15648 1581 aaPredicted RBP12.07□□□□□ -0.48
PUM1-212ENST00000498627 NPATQ14207 1427 aa12.06□□□□□ -0.48
PUM1-212ENST00000498627 PKD2Q13563 968 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms