RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.14
SGMS1-205ENST00000498514 PHF14O94880 888 aa7.95□□□□□ -1.14
SGMS1-205ENST00000498514 ITGBL1O95965 494 aaPredicted RBP7.95□□□□□ -1.14
SGMS1-205ENST00000498514 LAPTM4BQ86VI4 370 aa7.95□□□□□ -1.14
SGMS1-205ENST00000498514 BCAMP50895 628 aa7.94□□□□□ -1.14
SGMS1-205ENST00000498514 SOWAHBA6NEL2 793 aa7.93□□□□□ -1.14
SGMS1-205ENST00000498514 NYAP1Q6ZVC0 841 aa7.93□□□□□ -1.14
SGMS1-205ENST00000498514 KIAA1468Q9P260 1216 aa7.93□□□□□ -1.14
SGMS1-205ENST00000498514 ONECUT3O60422 494 aaPredicted RBP7.92□□□□□ -1.14
SGMS1-205ENST00000498514 ZFRQ96KR1 1074 aaKnown RBP7.92□□□□□ -1.14
SGMS1-205ENST00000498514 EPAS1Q99814 870 aa7.91□□□□□ -1.14
SGMS1-205ENST00000498514 DCAF8L2P0C7V8 631 aa7.89□□□□□ -1.15
SGMS1-205ENST00000498514 C6orf132Q5T0Z8 1188 aa7.89□□□□□ -1.15
SGMS1-205ENST00000498514 CADPS2Q86UW7 1296 aa7.89□□□□□ -1.15
SGMS1-205ENST00000498514 WBP1LQ9NX94 342 aa7.89□□□□□ -1.15
SGMS1-205ENST00000498514 KCNC4Q03721 635 aa7.88□□□□□ -1.15
SGMS1-205ENST00000498514 SEPT9Q9UHD8 586 aaPredicted RBP7.87□□□□□ -1.15
SGMS1-205ENST00000498514 TRIM6-TRIM34B2RNG4 842 aa7.86□□□□□ -1.15
SGMS1-205ENST00000498514 CAMK2BQ13554 666 aa7.86□□□□□ -1.15
SGMS1-205ENST00000498514 FAM98CQ17RN3 349 aaKnown RBP7.86□□□□□ -1.15
SGMS1-205ENST00000498514 RBM33Q96EV2 1170 aaKnown RBP7.86□□□□□ -1.15
SGMS1-205ENST00000498514 DPYSL4O14531 572 aa7.85□□□□□ -1.15
SGMS1-205ENST00000498514 Q6ZNB5 142 aa7.85□□□□□ -1.15
SGMS1-205ENST00000498514 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.85□□□□□ -1.15
SGMS1-205ENST00000498514 TSR3Q9UJK0 312 aaKnown RBP7.85□□□□□ -1.15
SGMS1-205ENST00000498514 LRCH3Q96II8 777 aa7.84□□□□□ -1.15
SGMS1-205ENST00000498514 HPS5Q9UPZ3 1129 aa7.83□□□□□ -1.16
SGMS1-205ENST00000498514 DDX12PQ92771 950 aa7.82□□□□□ -1.16
SGMS1-205ENST00000498514 PACS2Q86VP3 889 aa7.81□□□□□ -1.16
SGMS1-205ENST00000498514 MAP3K7O43318 606 aa7.78□□□□□ -1.16
SGMS1-205ENST00000498514 PPP4CP60510 307 aa7.78□□□□□ -1.16
SGMS1-205ENST00000498514 EN1Q05925 392 aaPredicted RBP7.78□□□□□ -1.16
SGMS1-205ENST00000498514 LAPTM4AQ15012 233 aa7.78□□□□□ -1.16
SGMS1-205ENST00000498514 TSKSQ9UJT2 592 aa7.78□□□□□ -1.16
SGMS1-205ENST00000498514 NBR1Q14596 966 aa7.77□□□□□ -1.17
SGMS1-205ENST00000498514 TSR1Q2NL82 804 aaKnown RBP7.76□□□□□ -1.17
SGMS1-205ENST00000498514 SPDYE16A6NNV3 312 aaPredicted RBP7.74□□□□□ -1.17
SGMS1-205ENST00000498514 PDIA6Q15084 440 aa7.74□□□□□ -1.17
SGMS1-205ENST00000498514 GFRA3O60609 400 aa7.73□□□□□ -1.17
SGMS1-205ENST00000498514 TJAP1Q5JTD0 557 aa7.73□□□□□ -1.17
SGMS1-205ENST00000498514 CDCA7LQ96GN5 454 aa7.73□□□□□ -1.17
SGMS1-205ENST00000498514 SMAPO00193 183 aa7.72□□□□□ -1.17
SGMS1-205ENST00000498514 PRSS12P56730 875 aa7.72□□□□□ -1.17
SGMS1-205ENST00000498514 SAMD7Q7Z3H4 446 aa7.72□□□□□ -1.17
SGMS1-205ENST00000498514 CERKQ8TCT0 537 aa7.72□□□□□ -1.17
SGMS1-205ENST00000498514 TRAF7Q6Q0C0 670 aa7.71□□□□□ -1.18
SGMS1-205ENST00000498514 NBPF26B4DH59 902 aa7.7□□□□□ -1.18
SGMS1-205ENST00000498514 MTRQ99707 1265 aa7.7□□□□□ -1.18
SGMS1-205ENST00000498514 PRKD2Q9BZL6 878 aa7.7□□□□□ -1.18
SGMS1-205ENST00000498514 IL21Q9HBE4 155 aa7.7□□□□□ -1.18
SGMS1-205ENST00000498514 HDGFP51858 240 aaKnown RBP7.69□□□□□ -1.18
SGMS1-205ENST00000498514 FAM198AQ9UFP1 575 aa7.69□□□□□ -1.18
SGMS1-205ENST00000498514 PPP1R18Q6NYC8 613 aa7.68□□□□□ -1.18
SGMS1-205ENST00000498514 BBXQ8WY36 941 aaPredicted RBP7.68□□□□□ -1.18
SGMS1-205ENST00000498514 TATDN2Q93075 761 aa7.68□□□□□ -1.18
SGMS1-205ENST00000498514 PNMA3Q9UL41 463 aa7.68□□□□□ -1.18
SGMS1-205ENST00000498514 NRG2O14511 850 aaPredicted RBP7.67□□□□□ -1.18
SGMS1-205ENST00000498514 LCE2BO14633 110 aa7.67□□□□□ -1.18
SGMS1-205ENST00000498514 V9GY48 417 aaPredicted RBP7.67□□□□□ -1.18
SGMS1-205ENST00000498514 GRXCR2A6NFK2 248 aa7.66□□□□□ -1.18
SGMS1-205ENST00000498514 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
SGMS1-205ENST00000498514 RNF40O75150 1001 aa7.66□□□□□ -1.18
SGMS1-205ENST00000498514 E2F4Q16254 413 aa7.66□□□□□ -1.18
SGMS1-205ENST00000498514 PRIM1P49642 420 aaKnown RBP7.65□□□□□ -1.18
SGMS1-205ENST00000498514 ZNF516Q92618 1163 aa7.65□□□□□ -1.18
SGMS1-205ENST00000498514 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.65□□□□□ -1.18
SGMS1-205ENST00000498514 NUDT18Q6ZVK8 323 aa7.64□□□□□ -1.19
SGMS1-205ENST00000498514 ARIH1Q9Y4X5 557 aaPredicted RBP7.64□□□□□ -1.19
SGMS1-205ENST00000498514 APLP1P51693 650 aa7.63□□□□□ -1.19
SGMS1-205ENST00000498514 SPRYD3Q8NCJ5 442 aa7.63□□□□□ -1.19
SGMS1-205ENST00000498514 NECTIN2Q92692 538 aa7.63□□□□□ -1.19
SGMS1-205ENST00000498514 RBM27Q9P2N5 1060 aaKnown RBP7.63□□□□□ -1.19
SGMS1-205ENST00000498514 OSBPP22059 807 aa7.62□□□□□ -1.19
SGMS1-205ENST00000498514 WDR70Q9NW82 654 aa7.62□□□□□ -1.19
SGMS1-205ENST00000498514 GGCXP38435 758 aa7.61□□□□□ -1.19
SGMS1-205ENST00000498514 CDHR5Q9HBB8 845 aa7.61□□□□□ -1.19
SGMS1-205ENST00000498514 NKX2-3Q8TAU0 364 aa7.6□□□□□ -1.19
SGMS1-205ENST00000498514 PDZRN3Q9UPQ7 1066 aa7.6□□□□□ -1.19
SGMS1-205ENST00000498514 SLF2Q8IX21 1173 aa7.59□□□□□ -1.19
SGMS1-205ENST00000498514 SLC4A3P48751 1232 aa7.58□□□□□ -1.2
SGMS1-205ENST00000498514 COPS2P61201 443 aa7.58□□□□□ -1.2
SGMS1-205ENST00000498514 SWT1Q5T5J6 900 aaKnown RBP7.58□□□□□ -1.2
SGMS1-205ENST00000498514 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.58□□□□□ -1.2
SGMS1-205ENST00000498514 ZNF787Q6DD87 383 aa7.57□□□□□ -1.2
SGMS1-205ENST00000498514 TTC13Q8NBP0 860 aa7.57□□□□□ -1.2
SGMS1-205ENST00000498514 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
SGMS1-205ENST00000498514 PADI6Q6TGC4 694 aa7.56□□□□□ -1.2
SGMS1-205ENST00000498514 ZPR1O75312 459 aa7.55□□□□□ -1.2
SGMS1-205ENST00000498514 NPDC1Q9NQX5 325 aaPredicted RBP7.55□□□□□ -1.2
SGMS1-205ENST00000498514 PRR14Q9BWN1 585 aa7.54□□□□□ -1.2
SGMS1-205ENST00000498514 EYA1Q99502 592 aa7.53□□□□□ -1.2
SGMS1-205ENST00000498514 PCDHB3Q9Y5E6 796 aa7.52□□□□□ -1.21
SGMS1-205ENST00000498514 CFAP44Q96MT7 982 aa7.51□□□□□ -1.21
SGMS1-205ENST00000498514 SLC19A1P41440 591 aa7.5□□□□□ -1.21
SGMS1-205ENST00000498514 PAXIP1Q6ZW49 1069 aaPredicted RBP7.5□□□□□ -1.21
SGMS1-205ENST00000498514 RNF223E7ERA6 249 aa7.49□□□□□ -1.21
SGMS1-205ENST00000498514 BLOC1S3Q6QNY0 202 aa7.48□□□□□ -1.21
SGMS1-205ENST00000498514 TRIM67Q6ZTA4 783 aa7.48□□□□□ -1.21
SGMS1-205ENST00000498514 ZNF775Q96BV0 537 aaPredicted RBP7.48□□□□□ -1.21
SGMS1-205ENST00000498514 DNAJB2P25686 324 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms