RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
PUDP-205ENST00000498474 ST18O60284 1047 aa13.28□□□□□ -0.28
PUDP-205ENST00000498474 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
PUDP-205ENST00000498474 WDR7Q9Y4E6 1490 aa13.28□□□□□ -0.28
PUDP-205ENST00000498474 C3orf67Q6ZVT6 689 aa13.27□□□□□ -0.29
PUDP-205ENST00000498474 COL17A1Q9UMD9 1497 aaPredicted RBP13.27□□□□□ -0.29
PUDP-205ENST00000498474 SAMD9Q5K651 1589 aa13.26□□□□□ -0.29
PUDP-205ENST00000498474 EEA1Q15075 1411 aa13.25□□□□□ -0.29
PUDP-205ENST00000498474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.24□□□□□ -0.29
PUDP-205ENST00000498474 ZFP91Q96JP5 570 aaPredicted RBP13.24□□□□□ -0.29
PUDP-205ENST00000498474 ATP10BO94823 1461 aa13.23□□□□□ -0.29
PUDP-205ENST00000498474 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
PUDP-205ENST00000498474 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
PUDP-205ENST00000498474 CD109Q6YHK3 1445 aa13.21□□□□□ -0.3
PUDP-205ENST00000498474 KIF21BO75037 1637 aa13.21□□□□□ -0.3
PUDP-205ENST00000498474 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
PUDP-205ENST00000498474 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
PUDP-205ENST00000498474 CFAP43Q8NDM7 1665 aa13.19□□□□□ -0.3
PUDP-205ENST00000498474 TEX14Q8IWB6 1497 aa13.19□□□□□ -0.3
PUDP-205ENST00000498474 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
PUDP-205ENST00000498474 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
PUDP-205ENST00000498474 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
PUDP-205ENST00000498474 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
PUDP-205ENST00000498474 MAGI3Q5TCQ9 1506 aa13.14□□□□□ -0.31
PUDP-205ENST00000498474 SNPHO15079 494 aa13.14□□□□□ -0.31
PUDP-205ENST00000498474 G3V3G9 751 aa13.12□□□□□ -0.31
PUDP-205ENST00000498474 ECM2O94769 699 aaPredicted RBP13.12□□□□□ -0.31
PUDP-205ENST00000498474 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
PUDP-205ENST00000498474 MARVELD3Q96A59 401 aa13.12□□□□□ -0.31
PUDP-205ENST00000498474 PHF8Q9UPP1 1060 aa13.12□□□□□ -0.31
PUDP-205ENST00000498474 ADGRL1O94910 1474 aa13.11□□□□□ -0.31
PUDP-205ENST00000498474 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
PUDP-205ENST00000498474 PKD2Q13563 968 aa13.11□□□□□ -0.31
PUDP-205ENST00000498474 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
PUDP-205ENST00000498474 EFCAB5A4FU69 1503 aa13.1□□□□□ -0.31
PUDP-205ENST00000498474 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
PUDP-205ENST00000498474 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
PUDP-205ENST00000498474 CDK13Q14004 1512 aaKnown RBP13.09□□□□□ -0.31
PUDP-205ENST00000498474 SOX12O15370 315 aa13.09□□□□□ -0.31
PUDP-205ENST00000498474 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
PUDP-205ENST00000498474 ARHGAP35Q9NRY4 1499 aa13.08□□□□□ -0.32
PUDP-205ENST00000498474 RAPGEF3O95398 923 aa13.07□□□□□ -0.32
PUDP-205ENST00000498474 PLEKHD1A6NEE1 506 aa13.06□□□□□ -0.32
PUDP-205ENST00000498474 RGL2O15211 777 aa13.06□□□□□ -0.32
PUDP-205ENST00000498474 STK24Q9Y6E0 443 aa13.05□□□□□ -0.32
PUDP-205ENST00000498474 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
PUDP-205ENST00000498474 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
PUDP-205ENST00000498474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.03□□□□□ -0.32
PUDP-205ENST00000498474 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
PUDP-205ENST00000498474 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.32
PUDP-205ENST00000498474 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
PUDP-205ENST00000498474 STK25O00506 426 aa13.01□□□□□ -0.33
PUDP-205ENST00000498474 HOXB3P14651 431 aaPredicted RBP13.01□□□□□ -0.33
PUDP-205ENST00000498474 FRMPD1Q5SYB0 1578 aa13.01□□□□□ -0.33
PUDP-205ENST00000498474 NEO1Q92859 1461 aa13□□□□□ -0.33
PUDP-205ENST00000498474 HECW1Q76N89 1606 aa12.99□□□□□ -0.33
PUDP-205ENST00000498474 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
PUDP-205ENST00000498474 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
PUDP-205ENST00000498474 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
PUDP-205ENST00000498474 AKNAQ7Z591 1439 aa12.98□□□□□ -0.33
PUDP-205ENST00000498474 MFRPQ9BY79 579 aa12.97□□□□□ -0.33
PUDP-205ENST00000498474 KIF14Q15058 1648 aa12.97□□□□□ -0.33
PUDP-205ENST00000498474 FANCAO15360 1455 aa12.97□□□□□ -0.33
PUDP-205ENST00000498474 RICTORQ6R327 1708 aa12.96□□□□□ -0.33
PUDP-205ENST00000498474 PHLDB1Q86UU1 1377 aa12.96□□□□□ -0.33
PUDP-205ENST00000498474 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
PUDP-205ENST00000498474 EMP3P54852 163 aa12.96□□□□□ -0.33
PUDP-205ENST00000498474 NLRP6P59044 892 aa12.96□□□□□ -0.33
PUDP-205ENST00000498474 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
PUDP-205ENST00000498474 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
PUDP-205ENST00000498474 DENND4BO75064 1496 aaPredicted RBP12.94□□□□□ -0.34
PUDP-205ENST00000498474 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
PUDP-205ENST00000498474 FAM205CA6NFA0 338 aa12.92□□□□□ -0.34
PUDP-205ENST00000498474 PLCH2O75038 1416 aa12.92□□□□□ -0.34
PUDP-205ENST00000498474 CFAP74Q9C0B2 1584 aa12.92□□□□□ -0.34
PUDP-205ENST00000498474 MYO5CQ9NQX4 1742 aa12.92□□□□□ -0.34
PUDP-205ENST00000498474 SIGLEC1Q9BZZ2 1709 aa12.91□□□□□ -0.34
PUDP-205ENST00000498474 HECW2Q9P2P5 1572 aa12.91□□□□□ -0.34
PUDP-205ENST00000498474 ADAMTSL3P82987 1691 aa12.9□□□□□ -0.34
PUDP-205ENST00000498474 TROQ12816 1431 aaPredicted RBP12.9□□□□□ -0.34
PUDP-205ENST00000498474 SCAPERQ9BY12 1400 aa12.9□□□□□ -0.34
PUDP-205ENST00000498474 YEATS2Q9ULM3 1422 aa12.9□□□□□ -0.34
PUDP-205ENST00000498474 HS3ST6Q96QI5 342 aa12.9□□□□□ -0.34
PUDP-205ENST00000498474 CDK11AQ9UQ88 783 aaPredicted RBP12.9□□□□□ -0.34
PUDP-205ENST00000498474 BCORL1Q5H9F3 1711 aa12.9□□□□□ -0.34
PUDP-205ENST00000498474 ARHGEF40Q8TER5 1519 aa12.89□□□□□ -0.35
PUDP-205ENST00000498474 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
PUDP-205ENST00000498474 CLIP1P30622 1438 aa12.88□□□□□ -0.35
PUDP-205ENST00000498474 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
PUDP-205ENST00000498474 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
PUDP-205ENST00000498474 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
PUDP-205ENST00000498474 CDC42BPBQ9Y5S2 1711 aa12.88□□□□□ -0.35
PUDP-205ENST00000498474 MLECQ14165 292 aa12.87□□□□□ -0.35
PUDP-205ENST00000498474 EFCAB2Q5VUJ9 269 aa12.87□□□□□ -0.35
PUDP-205ENST00000498474 ARHGAP5Q13017 1502 aa12.87□□□□□ -0.35
PUDP-205ENST00000498474 PTPRMP28827 1452 aa12.86□□□□□ -0.35
PUDP-205ENST00000498474 HOXB1P14653 301 aaPredicted RBP12.86□□□□□ -0.35
PUDP-205ENST00000498474 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
PUDP-205ENST00000498474 RIMS1Q86UR5 1692 aaKnown RBP12.86□□□□□ -0.35
PUDP-205ENST00000498474 ZMYM4Q5VZL5 1548 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms