RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 MAGI3Q5TCQ9 1506 aa12.23□□□□□ -0.45
RTCB-206ENST00000498434 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
RTCB-206ENST00000498434 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
RTCB-206ENST00000498434 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
RTCB-206ENST00000498434 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
RTCB-206ENST00000498434 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
RTCB-206ENST00000498434 DHX57Q6P158 1386 aaKnown RBP12.22□□□□□ -0.45
RTCB-206ENST00000498434 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.45
RTCB-206ENST00000498434 HFM1A2PYH4 1435 aa12.21□□□□□ -0.45
RTCB-206ENST00000498434 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.45
RTCB-206ENST00000498434 MIER1Q8N108 512 aa12.21□□□□□ -0.45
RTCB-206ENST00000498434 KIF14Q15058 1648 aa12.2□□□□□ -0.46
RTCB-206ENST00000498434 MMRN1Q13201 1228 aa12.19□□□□□ -0.46
RTCB-206ENST00000498434 CFDP1Q9UEE9 299 aaPredicted RBP12.19□□□□□ -0.46
RTCB-206ENST00000498434 ATP10BO94823 1461 aa12.19□□□□□ -0.46
RTCB-206ENST00000498434 ARID3CA6NKF2 412 aa12.18□□□□□ -0.46
RTCB-206ENST00000498434 TIMELESSQ9UNS1 1208 aa12.18□□□□□ -0.46
RTCB-206ENST00000498434 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
RTCB-206ENST00000498434 SPNS2Q8IVW8 549 aa12.17□□□□□ -0.46
RTCB-206ENST00000498434 ABCC2Q92887 1545 aa12.16□□□□□ -0.46
RTCB-206ENST00000498434 UHRF1BP1LA0JNW5 1464 aa12.16□□□□□ -0.46
RTCB-206ENST00000498434 PLCG2P16885 1265 aa12.15□□□□□ -0.46
RTCB-206ENST00000498434 RSPH4AQ5TD94 716 aa12.15□□□□□ -0.46
RTCB-206ENST00000498434 IFNL1Q8IU54 200 aa12.15□□□□□ -0.46
RTCB-206ENST00000498434 TMEM121BQ9BXQ6 578 aaPredicted RBP12.15□□□□□ -0.46
RTCB-206ENST00000498434 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
RTCB-206ENST00000498434 GPATCH8Q9UKJ3 1502 aaKnown RBP12.13□□□□□ -0.47
RTCB-206ENST00000498434 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
RTCB-206ENST00000498434 DAPK1P53355 1430 aa12.12□□□□□ -0.47
RTCB-206ENST00000498434 NAIPQ13075 1403 aa12.12□□□□□ -0.47
RTCB-206ENST00000498434 DNMT1P26358 1616 aaKnown RBP12.12□□□□□ -0.47
RTCB-206ENST00000498434 GCC2Q8IWJ2 1684 aa12.11□□□□□ -0.47
RTCB-206ENST00000498434 NUBP1P53384 320 aa12.11□□□□□ -0.47
RTCB-206ENST00000498434 CAMSAP2Q08AD1 1489 aa12.1□□□□□ -0.47
RTCB-206ENST00000498434 ABCC10Q5T3U5 1492 aa12.09□□□□□ -0.47
RTCB-206ENST00000498434 PLEKHH2Q8IVE3 1493 aa12.09□□□□□ -0.47
RTCB-206ENST00000498434 TSPY4P0CV99 314 aa12.09□□□□□ -0.47
RTCB-206ENST00000498434 TSPY10P0CW01 314 aa12.09□□□□□ -0.47
RTCB-206ENST00000498434 PTPRKQ15262 1439 aa12.09□□□□□ -0.47
RTCB-206ENST00000498434 ANKRD30AQ9BXX3 1397 aa12.08□□□□□ -0.48
RTCB-206ENST00000498434 KDM5BQ9UGL1 1544 aa12.08□□□□□ -0.48
RTCB-206ENST00000498434 ZNF316A6NFI3 1004 aaPredicted RBP12.08□□□□□ -0.48
RTCB-206ENST00000498434 ABCC5O15440 1437 aa12.08□□□□□ -0.48
RTCB-206ENST00000498434 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.48
RTCB-206ENST00000498434 SNPHO15079 494 aa12.06□□□□□ -0.48
RTCB-206ENST00000498434 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
RTCB-206ENST00000498434 CDC42BPAQ5VT25 1732 aa12.06□□□□□ -0.48
RTCB-206ENST00000498434 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
RTCB-206ENST00000498434 RRP7BPQ9NSQ0 103 aa12.05□□□□□ -0.48
RTCB-206ENST00000498434 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
RTCB-206ENST00000498434 CHIC2Q9UKJ5 165 aa12.05□□□□□ -0.48
RTCB-206ENST00000498434 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
RTCB-206ENST00000498434 ADGBQ8N7X0 1667 aa12.05□□□□□ -0.48
RTCB-206ENST00000498434 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
RTCB-206ENST00000498434 MAPKBP1O60336 1514 aa12.04□□□□□ -0.48
RTCB-206ENST00000498434 ARHGEF5Q12774 1597 aa12.04□□□□□ -0.48
RTCB-206ENST00000498434 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
RTCB-206ENST00000498434 PREX2Q70Z35 1606 aa12.04□□□□□ -0.48
RTCB-206ENST00000498434 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
RTCB-206ENST00000498434 ZCCHC11Q5TAX3 1644 aaKnown RBP12.03□□□□□ -0.48
RTCB-206ENST00000498434 EFCAB2Q5VUJ9 269 aa12.02□□□□□ -0.49
RTCB-206ENST00000498434 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
RTCB-206ENST00000498434 CROCC2H7BZ55 1655 aa12.02□□□□□ -0.49
RTCB-206ENST00000498434 NCOA1Q15788 1441 aa12.02□□□□□ -0.49
RTCB-206ENST00000498434 KIAA1107Q9UPP5 1409 aa12.02□□□□□ -0.49
RTCB-206ENST00000498434 MYO5CQ9NQX4 1742 aa12.01□□□□□ -0.49
RTCB-206ENST00000498434 MARVELD3Q96A59 401 aa12.01□□□□□ -0.49
RTCB-206ENST00000498434 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
RTCB-206ENST00000498434 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
RTCB-206ENST00000498434 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
RTCB-206ENST00000498434 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
RTCB-206ENST00000498434 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
RTCB-206ENST00000498434 TONSLQ96HA7 1378 aa12□□□□□ -0.49
RTCB-206ENST00000498434 DIEXFQ68CQ4 756 aaKnown RBP11.99□□□□□ -0.49
RTCB-206ENST00000498434 PLCH2O75038 1416 aa11.99□□□□□ -0.49
RTCB-206ENST00000498434 C9orf84Q5VXU9 1444 aa11.99□□□□□ -0.49
RTCB-206ENST00000498434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.99□□□□□ -0.49
RTCB-206ENST00000498434 WDR7Q9Y4E6 1490 aa11.98□□□□□ -0.49
RTCB-206ENST00000498434 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
RTCB-206ENST00000498434 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
RTCB-206ENST00000498434 MPHOSPH9Q99550 1183 aa11.97□□□□□ -0.49
RTCB-206ENST00000498434 CDC42BPBQ9Y5S2 1711 aa11.97□□□□□ -0.49
RTCB-206ENST00000498434 ANKRD50Q9ULJ7 1429 aa11.96□□□□□ -0.49
RTCB-206ENST00000498434 TTC37Q6PGP7 1564 aa11.95□□□□□ -0.5
RTCB-206ENST00000498434 MAST1Q9Y2H9 1570 aa11.95□□□□□ -0.5
RTCB-206ENST00000498434 MBD5Q9P267 1494 aa11.95□□□□□ -0.5
RTCB-206ENST00000498434 SAMD9LQ8IVG5 1584 aa11.94□□□□□ -0.5
RTCB-206ENST00000498434 HNRNPMP52272 730 aaKnown RBP eCLIP11.94□□□□□ -0.5
RTCB-206ENST00000498434 KIF15Q9NS87 1388 aa11.93□□□□□ -0.5
RTCB-206ENST00000498434 PPP1R15AO75807 674 aaPredicted RBP11.92□□□□□ -0.5
RTCB-206ENST00000498434 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
RTCB-206ENST00000498434 SYCP2Q9BX26 1530 aa11.91□□□□□ -0.5
RTCB-206ENST00000498434 ABCA9Q8IUA7 1624 aa11.9□□□□□ -0.5
RTCB-206ENST00000498434 RTEL1-TNFRSF6BF6WH68 1400 aa11.9□□□□□ -0.5
RTCB-206ENST00000498434 PLXNC1O60486 1568 aa11.9□□□□□ -0.5
RTCB-206ENST00000498434 ASXL2Q76L83 1435 aa11.9□□□□□ -0.5
RTCB-206ENST00000498434 EMP3P54852 163 aa11.89□□□□□ -0.51
RTCB-206ENST00000498434 KRTAP3-3Q9BYR6 98 aa11.89□□□□□ -0.51
RTCB-206ENST00000498434 KRTAP3-2Q9BYR7 98 aa11.89□□□□□ -0.51
RTCB-206ENST00000498434 KDM5DQ9BY66 1539 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms