RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
SSR3-209ENST00000498205 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
SSR3-209ENST00000498205 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
SSR3-209ENST00000498205 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
SSR3-209ENST00000498205 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
SSR3-209ENST00000498205 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
SSR3-209ENST00000498205 KCNK17Q96T54 332 aa11.3□□□□□ -0.6
SSR3-209ENST00000498205 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
SSR3-209ENST00000498205 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
SSR3-209ENST00000498205 RBM26Q5T8P6 1007 aaKnown RBP11.29□□□□□ -0.6
SSR3-209ENST00000498205 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
SSR3-209ENST00000498205 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
SSR3-209ENST00000498205 FCHSD2O94868 740 aa11.28□□□□□ -0.6
SSR3-209ENST00000498205 TK2O00142 265 aa11.27□□□□□ -0.61
SSR3-209ENST00000498205 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.61
SSR3-209ENST00000498205 TSR1Q2NL82 804 aaKnown RBP11.27□□□□□ -0.61
SSR3-209ENST00000498205 PRIM1P49642 420 aaKnown RBP11.26□□□□□ -0.61
SSR3-209ENST00000498205 PTGDRQ13258 359 aa11.26□□□□□ -0.61
SSR3-209ENST00000498205 PSEN2P49810 448 aa11.25□□□□□ -0.61
SSR3-209ENST00000498205 HIC1Q14526 733 aa11.25□□□□□ -0.61
SSR3-209ENST00000498205 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
SSR3-209ENST00000498205 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
SSR3-209ENST00000498205 ZBED2Q9BTP6 218 aa11.23□□□□□ -0.61
SSR3-209ENST00000498205 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
SSR3-209ENST00000498205 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
SSR3-209ENST00000498205 NPDC1Q9NQX5 325 aaPredicted RBP11.22□□□□□ -0.61
SSR3-209ENST00000498205 COL9A1P20849 921 aa11.21□□□□□ -0.61
SSR3-209ENST00000498205 PRSS12P56730 875 aa11.21□□□□□ -0.61
SSR3-209ENST00000498205 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
SSR3-209ENST00000498205 GNPATO15228 680 aa11.19□□□□□ -0.62
SSR3-209ENST00000498205 DMRTA1Q5VZB9 504 aa11.19□□□□□ -0.62
SSR3-209ENST00000498205 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
SSR3-209ENST00000498205 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
SSR3-209ENST00000498205 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
SSR3-209ENST00000498205 ADGRD1Q6QNK2 874 aa11.18□□□□□ -0.62
SSR3-209ENST00000498205 PACS2Q86VP3 889 aa11.18□□□□□ -0.62
SSR3-209ENST00000498205 RABGEF1Q9UJ41 708 aa11.18□□□□□ -0.62
SSR3-209ENST00000498205 NBPF3Q9H094 633 aa11.17□□□□□ -0.62
SSR3-209ENST00000498205 VPS9D1Q9Y2B5 631 aa11.17□□□□□ -0.62
SSR3-209ENST00000498205 GPR37O15354 613 aa11.16□□□□□ -0.62
SSR3-209ENST00000498205 ANKRD13DQ6ZTN6 518 aa11.16□□□□□ -0.62
SSR3-209ENST00000498205 ZC3H15Q8WU90 426 aaKnown RBP11.15□□□□□ -0.62
SSR3-209ENST00000498205 STAC3Q96MF2 364 aa11.15□□□□□ -0.62
SSR3-209ENST00000498205 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
SSR3-209ENST00000498205 TTC13Q8NBP0 860 aa11.14□□□□□ -0.63
SSR3-209ENST00000498205 PADI6Q6TGC4 694 aa11.13□□□□□ -0.63
SSR3-209ENST00000498205 ZMYND10O75800 440 aa11.12□□□□□ -0.63
SSR3-209ENST00000498205 PROX2Q3B8N5 592 aa11.12□□□□□ -0.63
SSR3-209ENST00000498205 LAPTM4BQ86VI4 370 aa11.12□□□□□ -0.63
SSR3-209ENST00000498205 TSKSQ9UJT2 592 aa11.12□□□□□ -0.63
SSR3-209ENST00000498205 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
SSR3-209ENST00000498205 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
SSR3-209ENST00000498205 BHMG1C9JSJ3 638 aaPredicted RBP11.1□□□□□ -0.63
SSR3-209ENST00000498205 HRO43593 1189 aa11.1□□□□□ -0.63
SSR3-209ENST00000498205 OATP04181 439 aa11.1□□□□□ -0.63
SSR3-209ENST00000498205 BARGINQ6ZT62 677 aa11.1□□□□□ -0.63
SSR3-209ENST00000498205 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
SSR3-209ENST00000498205 MRPL50Q8N5N7 158 aaKnown RBP11.09□□□□□ -0.63
SSR3-209ENST00000498205 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
SSR3-209ENST00000498205 KRI1Q8N9T8 703 aaKnown RBP11.07□□□□□ -0.64
SSR3-209ENST00000498205 TATDN2Q93075 761 aa11.07□□□□□ -0.64
SSR3-209ENST00000498205 PNMA3Q9UL41 463 aa11.07□□□□□ -0.64
SSR3-209ENST00000498205 FAM98CQ17RN3 349 aaKnown RBP11.05□□□□□ -0.64
SSR3-209ENST00000498205 ADGRG1Q9Y653 693 aa11.05□□□□□ -0.64
SSR3-209ENST00000498205 GOLGA8CPA6NN73 597 aa11.04□□□□□ -0.64
SSR3-209ENST00000498205 IRF6O14896 467 aa11.04□□□□□ -0.64
SSR3-209ENST00000498205 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
SSR3-209ENST00000498205 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
SSR3-209ENST00000498205 FAM198AQ9UFP1 575 aa11.04□□□□□ -0.64
SSR3-209ENST00000498205 FECHP22830 423 aa11.03□□□□□ -0.64
SSR3-209ENST00000498205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.01□□□□□ -0.65
SSR3-209ENST00000498205 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
SSR3-209ENST00000498205 PXYLP1Q8TE99 480 aa11.01□□□□□ -0.65
SSR3-209ENST00000498205 EYA1Q99502 592 aa11.01□□□□□ -0.65
SSR3-209ENST00000498205 DNAJB2P25686 324 aa11□□□□□ -0.65
SSR3-209ENST00000498205 METTL3Q86U44 580 aaKnown RBP11□□□□□ -0.65
SSR3-209ENST00000498205 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
SSR3-209ENST00000498205 AK7Q96M32 723 aa10.99□□□□□ -0.65
SSR3-209ENST00000498205 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
SSR3-209ENST00000498205 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
SSR3-209ENST00000498205 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
SSR3-209ENST00000498205 CCDC102AQ96A19 550 aa10.98□□□□□ -0.65
SSR3-209ENST00000498205 ZFRQ96KR1 1074 aaKnown RBP10.98□□□□□ -0.65
SSR3-209ENST00000498205 SEPT9Q9UHD8 586 aaPredicted RBP10.98□□□□□ -0.65
SSR3-209ENST00000498205 ANKK1Q8NFD2 765 aa10.97□□□□□ -0.65
SSR3-209ENST00000498205 SMAPO00193 183 aa10.95□□□□□ -0.66
SSR3-209ENST00000498205 RCCD1A6NED2 376 aa10.94□□□□□ -0.66
SSR3-209ENST00000498205 WNT2BQ93097 391 aa10.94□□□□□ -0.66
SSR3-209ENST00000498205 LRCH3Q96II8 777 aa10.93□□□□□ -0.66
SSR3-209ENST00000498205 TMEM134Q9H6X4 195 aa10.93□□□□□ -0.66
SSR3-209ENST00000498205 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
SSR3-209ENST00000498205 FAM161AQ3B820 660 aa10.92□□□□□ -0.66
SSR3-209ENST00000498205 SLF2Q8IX21 1173 aa10.92□□□□□ -0.66
SSR3-209ENST00000498205 SLC24A3Q9HC58 644 aa10.92□□□□□ -0.66
SSR3-209ENST00000498205 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.92□□□□□ -0.66
SSR3-209ENST00000498205 SOWAHBA6NEL2 793 aa10.91□□□□□ -0.66
SSR3-209ENST00000498205 AMHR2Q16671 573 aa10.91□□□□□ -0.66
SSR3-209ENST00000498205 RSPH4AQ5TD94 716 aa10.91□□□□□ -0.66
SSR3-209ENST00000498205 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
SSR3-209ENST00000498205 CLCN1P35523 988 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms