RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 PPP4R3BQ5MIZ7 849 aa14.92□□□□□ -0.02
GARNL3-221ENST00000497703 TSR1Q2NL82 804 aaKnown RBP14.9□□□□□ -0.02
GARNL3-221ENST00000497703 CDHR5Q9HBB8 845 aa14.9□□□□□ -0.02
GARNL3-221ENST00000497703 DAXXQ9UER7 740 aaPredicted RBP14.9□□□□□ -0.02
GARNL3-221ENST00000497703 TRIM66O15016 1216 aa14.89□□□□□ -0.03
GARNL3-221ENST00000497703 LHX8Q68G74 356 aa14.89□□□□□ -0.03
GARNL3-221ENST00000497703 CCDC102AQ96A19 550 aa14.89□□□□□ -0.03
GARNL3-221ENST00000497703 LHX6Q9UPM6 363 aa14.89□□□□□ -0.03
GARNL3-221ENST00000497703 C6orf132Q5T0Z8 1188 aa14.87□□□□□ -0.03
GARNL3-221ENST00000497703 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
GARNL3-221ENST00000497703 HOXB1P14653 301 aaPredicted RBP14.86□□□□□ -0.03
GARNL3-221ENST00000497703 PDE4DQ08499 809 aa14.86□□□□□ -0.03
GARNL3-221ENST00000497703 FECHP22830 423 aa14.85□□□□□ -0.03
GARNL3-221ENST00000497703 NPDC1Q9NQX5 325 aaPredicted RBP14.84□□□□□ -0.03
GARNL3-221ENST00000497703 ADAM33Q9BZ11 813 aa14.82□□□□□ -0.04
GARNL3-221ENST00000497703 KCNH8Q96L42 1107 aa14.81□□□□□ -0.04
GARNL3-221ENST00000497703 PTPREP23469 700 aa14.78□□□□□ -0.04
GARNL3-221ENST00000497703 TTLL12Q14166 644 aaPredicted RBP14.78□□□□□ -0.04
GARNL3-221ENST00000497703 AMHR2Q16671 573 aa14.78□□□□□ -0.04
GARNL3-221ENST00000497703 GPBP1L1Q9HC44 474 aaPredicted RBP14.78□□□□□ -0.04
GARNL3-221ENST00000497703 KDM4CQ9H3R0 1056 aa14.77□□□□□ -0.05
GARNL3-221ENST00000497703 BCL2L12Q9HB09 334 aa14.77□□□□□ -0.05
GARNL3-221ENST00000497703 RBM27Q9P2N5 1060 aaKnown RBP14.77□□□□□ -0.05
GARNL3-221ENST00000497703 OATP04181 439 aa14.75□□□□□ -0.05
GARNL3-221ENST00000497703 PADI6Q6TGC4 694 aa14.74□□□□□ -0.05
GARNL3-221ENST00000497703 PRSS12P56730 875 aa14.73□□□□□ -0.05
GARNL3-221ENST00000497703 PPP1R3GB7ZBB8 358 aa14.71□□□□□ -0.05
GARNL3-221ENST00000497703 CDCA7LQ96GN5 454 aa14.71□□□□□ -0.05
GARNL3-221ENST00000497703 ERBB3P21860 1342 aa14.69□□□□□ -0.06
GARNL3-221ENST00000497703 CLCN1P35523 988 aa14.68□□□□□ -0.06
GARNL3-221ENST00000497703 PARP9Q8IXQ6 854 aa14.68□□□□□ -0.06
GARNL3-221ENST00000497703 RBM46Q8TBY0 533 aaKnown RBP14.68□□□□□ -0.06
GARNL3-221ENST00000497703 IL27Q8NEV9 243 aa14.66□□□□□ -0.06
GARNL3-221ENST00000497703 DDRGK1Q96HY6 314 aa14.66□□□□□ -0.06
GARNL3-221ENST00000497703 GTF3C3Q9Y5Q9 886 aa14.66□□□□□ -0.06
GARNL3-221ENST00000497703 METTL3Q86U44 580 aaKnown RBP14.65□□□□□ -0.06
GARNL3-221ENST00000497703 KCNK17Q96T54 332 aa14.65□□□□□ -0.06
GARNL3-221ENST00000497703 ADGRG1Q9Y653 693 aa14.65□□□□□ -0.06
GARNL3-221ENST00000497703 COL9A1P20849 921 aa14.64□□□□□ -0.07
GARNL3-221ENST00000497703 EMP3P54852 163 aa14.64□□□□□ -0.07
GARNL3-221ENST00000497703 PACS2Q86VP3 889 aa14.63□□□□□ -0.07
GARNL3-221ENST00000497703 TTC13Q8NBP0 860 aa14.63□□□□□ -0.07
GARNL3-221ENST00000497703 GPCPD1Q9NPB8 672 aa14.63□□□□□ -0.07
GARNL3-221ENST00000497703 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
GARNL3-221ENST00000497703 FAM161AQ3B820 660 aa14.62□□□□□ -0.07
GARNL3-221ENST00000497703 GIGYF2Q6Y7W6 1299 aaKnown RBP14.62□□□□□ -0.07
GARNL3-221ENST00000497703 NBPF26B4DH59 902 aa14.61□□□□□ -0.07
GARNL3-221ENST00000497703 ST18O60284 1047 aa14.61□□□□□ -0.07
GARNL3-221ENST00000497703 VARS2Q5ST30 1063 aaKnown RBP14.61□□□□□ -0.07
GARNL3-221ENST00000497703 PXYLP1Q8TE99 480 aa14.61□□□□□ -0.07
GARNL3-221ENST00000497703 TRIM6-TRIM34B2RNG4 842 aa14.58□□□□□ -0.08
GARNL3-221ENST00000497703 FAM117AQ9C073 453 aa14.57□□□□□ -0.08
GARNL3-221ENST00000497703 ARHGAP33O14559 1287 aa14.56□□□□□ -0.08
GARNL3-221ENST00000497703 PHOX2BQ99453 314 aa14.56□□□□□ -0.08
GARNL3-221ENST00000497703 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.55□□□□□ -0.08
GARNL3-221ENST00000497703 ONECUT3O60422 494 aaPredicted RBP14.55□□□□□ -0.08
GARNL3-221ENST00000497703 PBX2P40425 430 aa14.55□□□□□ -0.08
GARNL3-221ENST00000497703 ERICH6Q7L0X2 663 aa14.55□□□□□ -0.08
GARNL3-221ENST00000497703 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
GARNL3-221ENST00000497703 TSKSQ9UJT2 592 aa14.55□□□□□ -0.08
GARNL3-221ENST00000497703 NUDT18Q6ZVK8 323 aa14.54□□□□□ -0.08
GARNL3-221ENST00000497703 MARVELD3Q96A59 401 aa14.54□□□□□ -0.08
GARNL3-221ENST00000497703 PNMA3Q9UL41 463 aa14.54□□□□□ -0.08
GARNL3-221ENST00000497703 TATDN2Q93075 761 aa14.52□□□□□ -0.09
GARNL3-221ENST00000497703 FAM205CA6NFA0 338 aa14.51□□□□□ -0.09
GARNL3-221ENST00000497703 SSTR3P32745 418 aaPredicted RBP14.51□□□□□ -0.09
GARNL3-221ENST00000497703 DNAJB2P25686 324 aa14.5□□□□□ -0.09
GARNL3-221ENST00000497703 PSEN2P49810 448 aa14.5□□□□□ -0.09
GARNL3-221ENST00000497703 PROX2Q3B8N5 592 aa14.5□□□□□ -0.09
GARNL3-221ENST00000497703 FAM198AQ9UFP1 575 aa14.5□□□□□ -0.09
GARNL3-221ENST00000497703 RCCD1A6NED2 376 aa14.49□□□□□ -0.09
GARNL3-221ENST00000497703 MS4A1P11836 297 aa14.49□□□□□ -0.09
GARNL3-221ENST00000497703 EYA1Q99502 592 aa14.49□□□□□ -0.09
GARNL3-221ENST00000497703 ZBED2Q9BTP6 218 aa14.49□□□□□ -0.09
GARNL3-221ENST00000497703 TMUB1Q9BVT8 246 aa14.49□□□□□ -0.09
GARNL3-221ENST00000497703 REPIN1Q9BWE0 567 aaKnown RBP14.49□□□□□ -0.09
GARNL3-221ENST00000497703 ZNF687Q8N1G0 1237 aa14.48□□□□□ -0.09
GARNL3-221ENST00000497703 NLRP7Q8WX94 980 aa14.48□□□□□ -0.09
GARNL3-221ENST00000497703 FAM217BQ9NTX9 383 aaPredicted RBP14.48□□□□□ -0.09
GARNL3-221ENST00000497703 SULF1Q8IWU6 871 aa14.47□□□□□ -0.09
GARNL3-221ENST00000497703 KIAA1468Q9P260 1216 aa14.47□□□□□ -0.09
GARNL3-221ENST00000497703 SLC4A5Q9BY07 1137 aa14.46□□□□□ -0.09
GARNL3-221ENST00000497703 RSPH6AQ9H0K4 717 aa14.45□□□□□ -0.1
GARNL3-221ENST00000497703 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
GARNL3-221ENST00000497703 HDGFP51858 240 aaKnown RBP14.44□□□□□ -0.1
GARNL3-221ENST00000497703 BEGAINQ9BUH8 593 aa14.44□□□□□ -0.1
GARNL3-221ENST00000497703 RABGEF1Q9UJ41 708 aa14.44□□□□□ -0.1
GARNL3-221ENST00000497703 AXIN2Q9Y2T1 843 aa14.44□□□□□ -0.1
GARNL3-221ENST00000497703 SLC4A3P48751 1232 aa14.43□□□□□ -0.1
GARNL3-221ENST00000497703 HS3ST6Q96QI5 342 aa14.42□□□□□ -0.1
GARNL3-221ENST00000497703 GOPCQ9HD26 462 aa14.42□□□□□ -0.1
GARNL3-221ENST00000497703 RSPH4AQ5TD94 716 aa14.41□□□□□ -0.1
GARNL3-221ENST00000497703 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
GARNL3-221ENST00000497703 SMAPO00193 183 aa14.4□□□□□ -0.1
GARNL3-221ENST00000497703 DIXDC1Q155Q3 683 aa14.4□□□□□ -0.1
GARNL3-221ENST00000497703 NBPF3Q9H094 633 aa14.4□□□□□ -0.1
GARNL3-221ENST00000497703 ATP1B4Q9UN42 357 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-221ENST00000497703 DMRTA1Q5VZB9 504 aa14.39□□□□□ -0.11
GARNL3-221ENST00000497703 PCMTD1Q96MG8 357 aaPredicted RBP14.39□□□□□ -0.11
GARNL3-221ENST00000497703 DDX11L8A8MPP1 907 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms