RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 NUTM2FA1L443 756 aa14.13□□□□□ -0.15
ATP13A3-210ENST00000497567 ZNF687Q8N1G0 1237 aa14.13□□□□□ -0.15
ATP13A3-210ENST00000497567 POTEGQ6S5H5 508 aa14.12□□□□□ -0.15
ATP13A3-210ENST00000497567 POTEMA6NI47 508 aa14.1□□□□□ -0.15
ATP13A3-210ENST00000497567 AXIN2Q9Y2T1 843 aa14.1□□□□□ -0.15
ATP13A3-210ENST00000497567 GPIHBP1Q8IV16 184 aa14.09□□□□□ -0.15
ATP13A3-210ENST00000497567 GPR37O15354 613 aa14.08□□□□□ -0.16
ATP13A3-210ENST00000497567 COL9A1P20849 921 aa14.08□□□□□ -0.16
ATP13A3-210ENST00000497567 PSEN2P49810 448 aa14.08□□□□□ -0.16
ATP13A3-210ENST00000497567 KCNK17Q96T54 332 aa14.08□□□□□ -0.16
ATP13A3-210ENST00000497567 NPDC1Q9NQX5 325 aaPredicted RBP14.08□□□□□ -0.16
ATP13A3-210ENST00000497567 PTPREP23469 700 aa14.07□□□□□ -0.16
ATP13A3-210ENST00000497567 ZC3H15Q8WU90 426 aaKnown RBP14.05□□□□□ -0.16
ATP13A3-210ENST00000497567 ARHGAP33O14559 1287 aa14.04□□□□□ -0.16
ATP13A3-210ENST00000497567 PTGDRQ13258 359 aa14.04□□□□□ -0.16
ATP13A3-210ENST00000497567 DMRTA1Q5VZB9 504 aa14.03□□□□□ -0.16
ATP13A3-210ENST00000497567 PPP1R3GB7ZBB8 358 aa14.01□□□□□ -0.17
ATP13A3-210ENST00000497567 FCHSD2O94868 740 aa14.01□□□□□ -0.17
ATP13A3-210ENST00000497567 PBX2P40425 430 aa14.01□□□□□ -0.17
ATP13A3-210ENST00000497567 TPRNQ4KMQ1 711 aa13.99□□□□□ -0.17
ATP13A3-210ENST00000497567 FECHP22830 423 aa13.98□□□□□ -0.17
ATP13A3-210ENST00000497567 PRKCSHP14314 528 aaPredicted RBP13.97□□□□□ -0.17
ATP13A3-210ENST00000497567 KRTAP3-3Q9BYR6 98 aa13.97□□□□□ -0.17
ATP13A3-210ENST00000497567 KRTAP3-2Q9BYR7 98 aa13.97□□□□□ -0.17
ATP13A3-210ENST00000497567 PROX2Q3B8N5 592 aa13.96□□□□□ -0.17
ATP13A3-210ENST00000497567 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
ATP13A3-210ENST00000497567 ZBED2Q9BTP6 218 aa13.96□□□□□ -0.17
ATP13A3-210ENST00000497567 HIC1Q14526 733 aa13.95□□□□□ -0.18
ATP13A3-210ENST00000497567 CDAN1Q8IWY9 1227 aa13.95□□□□□ -0.18
ATP13A3-210ENST00000497567 CERKQ8TCT0 537 aa13.95□□□□□ -0.18
ATP13A3-210ENST00000497567 GNPATO15228 680 aa13.94□□□□□ -0.18
ATP13A3-210ENST00000497567 ZMYND10O75800 440 aa13.94□□□□□ -0.18
ATP13A3-210ENST00000497567 PRSS12P56730 875 aa13.94□□□□□ -0.18
ATP13A3-210ENST00000497567 CDCA7LQ96GN5 454 aa13.94□□□□□ -0.18
ATP13A3-210ENST00000497567 FAM198AQ9UFP1 575 aa13.94□□□□□ -0.18
ATP13A3-210ENST00000497567 LSM11P83369 360 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATP13A3-210ENST00000497567 PADI6Q6TGC4 694 aa13.93□□□□□ -0.18
ATP13A3-210ENST00000497567 TSKSQ9UJT2 592 aa13.91□□□□□ -0.18
ATP13A3-210ENST00000497567 BARGINQ6ZT62 677 aa13.9□□□□□ -0.18
ATP13A3-210ENST00000497567 TTC13Q8NBP0 860 aa13.9□□□□□ -0.18
ATP13A3-210ENST00000497567 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
ATP13A3-210ENST00000497567 C3orf80F5H4A9 247 aa13.88□□□□□ -0.19
ATP13A3-210ENST00000497567 SLC4A5Q9BY07 1137 aa13.88□□□□□ -0.19
ATP13A3-210ENST00000497567 VPS9D1Q9Y2B5 631 aa13.88□□□□□ -0.19
ATP13A3-210ENST00000497567 ANKRD13DQ6ZTN6 518 aa13.87□□□□□ -0.19
ATP13A3-210ENST00000497567 RBM27Q9P2N5 1060 aaKnown RBP13.87□□□□□ -0.19
ATP13A3-210ENST00000497567 FAM161AQ3B820 660 aa13.86□□□□□ -0.19
ATP13A3-210ENST00000497567 KIAA1468Q9P260 1216 aa13.85□□□□□ -0.19
ATP13A3-210ENST00000497567 ADGRD1Q6QNK2 874 aa13.84□□□□□ -0.19
ATP13A3-210ENST00000497567 TK2O00142 265 aa13.83□□□□□ -0.2
ATP13A3-210ENST00000497567 MAP2K5Q13163 448 aa13.83□□□□□ -0.2
ATP13A3-210ENST00000497567 ONECUT3O60422 494 aaPredicted RBP13.82□□□□□ -0.2
ATP13A3-210ENST00000497567 KRI1Q8N9T8 703 aaKnown RBP13.82□□□□□ -0.2
ATP13A3-210ENST00000497567 SLC24A3Q9HC58 644 aa13.82□□□□□ -0.2
ATP13A3-210ENST00000497567 ADGRG1Q9Y653 693 aa13.81□□□□□ -0.2
ATP13A3-210ENST00000497567 SMAPO00193 183 aa13.8□□□□□ -0.2
ATP13A3-210ENST00000497567 IRF6O14896 467 aa13.8□□□□□ -0.2
ATP13A3-210ENST00000497567 PACS2Q86VP3 889 aa13.8□□□□□ -0.2
ATP13A3-210ENST00000497567 RABGEF1Q9UJ41 708 aa13.8□□□□□ -0.2
ATP13A3-210ENST00000497567 MINK1Q8N4C8 1332 aaPredicted RBP13.8□□□□□ -0.2
ATP13A3-210ENST00000497567 CCDC102AQ96A19 550 aa13.79□□□□□ -0.2
ATP13A3-210ENST00000497567 BHMG1C9JSJ3 638 aaPredicted RBP13.78□□□□□ -0.2
ATP13A3-210ENST00000497567 HRO43593 1189 aa13.78□□□□□ -0.2
ATP13A3-210ENST00000497567 NUDT18Q6ZVK8 323 aa13.78□□□□□ -0.2
ATP13A3-210ENST00000497567 TATDN2Q93075 761 aa13.78□□□□□ -0.2
ATP13A3-210ENST00000497567 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
ATP13A3-210ENST00000497567 SEPT9Q9UHD8 586 aaPredicted RBP13.77□□□□□ -0.21
ATP13A3-210ENST00000497567 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
ATP13A3-210ENST00000497567 EYA1Q99502 592 aa13.75□□□□□ -0.21
ATP13A3-210ENST00000497567 PXYLP1Q8TE99 480 aa13.73□□□□□ -0.21
ATP13A3-210ENST00000497567 PHOX2BQ99453 314 aa13.73□□□□□ -0.21
ATP13A3-210ENST00000497567 PCDH10Q9P2E7 1040 aa13.73□□□□□ -0.21
ATP13A3-210ENST00000497567 METTL3Q86U44 580 aaKnown RBP13.72□□□□□ -0.21
ATP13A3-210ENST00000497567 AK7Q96M32 723 aa13.72□□□□□ -0.21
ATP13A3-210ENST00000497567 NLRP7Q8WX94 980 aa13.71□□□□□ -0.21
ATP13A3-210ENST00000497567 OATP04181 439 aa13.7□□□□□ -0.22
ATP13A3-210ENST00000497567 RBM46Q8TBY0 533 aaKnown RBP13.7□□□□□ -0.22
ATP13A3-210ENST00000497567 NBPF3Q9H094 633 aa13.7□□□□□ -0.22
ATP13A3-210ENST00000497567 TRIM66O15016 1216 aa13.68□□□□□ -0.22
ATP13A3-210ENST00000497567 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
ATP13A3-210ENST00000497567 RCCD1A6NED2 376 aa13.66□□□□□ -0.22
ATP13A3-210ENST00000497567 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
ATP13A3-210ENST00000497567 LAPTM4BQ86VI4 370 aa13.65□□□□□ -0.22
ATP13A3-210ENST00000497567 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
ATP13A3-210ENST00000497567 DNAJB2P25686 324 aa13.62□□□□□ -0.23
ATP13A3-210ENST00000497567 ZFRQ96KR1 1074 aaKnown RBP13.62□□□□□ -0.23
ATP13A3-210ENST00000497567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.61□□□□□ -0.23
ATP13A3-210ENST00000497567 SPNS2Q8IVW8 549 aa13.61□□□□□ -0.23
ATP13A3-210ENST00000497567 AMHR2Q16671 573 aa13.6□□□□□ -0.23
ATP13A3-210ENST00000497567 MDM2Q00987 491 aaPredicted RBP13.59□□□□□ -0.23
ATP13A3-210ENST00000497567 PDE4DQ08499 809 aa13.59□□□□□ -0.23
ATP13A3-210ENST00000497567 SWT1Q5T5J6 900 aaKnown RBP13.59□□□□□ -0.23
ATP13A3-210ENST00000497567 SAMD7Q7Z3H4 446 aa13.59□□□□□ -0.23
ATP13A3-210ENST00000497567 REPIN1Q9BWE0 567 aaKnown RBP13.59□□□□□ -0.23
ATP13A3-210ENST00000497567 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
ATP13A3-210ENST00000497567 GOLGA8CPA6NN73 597 aa13.57□□□□□ -0.24
ATP13A3-210ENST00000497567 PARP9Q8IXQ6 854 aa13.55□□□□□ -0.24
ATP13A3-210ENST00000497567 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
ATP13A3-210ENST00000497567 WNT2BQ93097 391 aa13.54□□□□□ -0.24
ATP13A3-210ENST00000497567 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms