RNA–Protein interactions for RNA: ENST00000497542.1

NT5C3A-212, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 4

Gene NT5C3A, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-212ENST00000497542 PROX2Q3B8N5 592 aa9.4□□□□□ -0.9
NT5C3A-212ENST00000497542 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
NT5C3A-212ENST00000497542 PCDHGA10Q9Y5H3 936 aa9.4□□□□□ -0.9
NT5C3A-212ENST00000497542 BCAMP50895 628 aa9.39□□□□□ -0.91
NT5C3A-212ENST00000497542 COL9A1P20849 921 aa9.38□□□□□ -0.91
NT5C3A-212ENST00000497542 MFSD10Q14728 455 aa9.38□□□□□ -0.91
NT5C3A-212ENST00000497542 LARP6Q9BRS8 491 aaKnown RBP9.38□□□□□ -0.91
NT5C3A-212ENST00000497542 ONECUT3O60422 494 aaPredicted RBP9.37□□□□□ -0.91
NT5C3A-212ENST00000497542 KCNC4Q03721 635 aa9.37□□□□□ -0.91
NT5C3A-212ENST00000497542 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
NT5C3A-212ENST00000497542 PHF14O94880 888 aa9.36□□□□□ -0.91
NT5C3A-212ENST00000497542 LAPTM4AQ15012 233 aa9.36□□□□□ -0.91
NT5C3A-212ENST00000497542 ZFRQ96KR1 1074 aaKnown RBP9.36□□□□□ -0.91
NT5C3A-212ENST00000497542 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
NT5C3A-212ENST00000497542 WBP1LQ9NX94 342 aa9.34□□□□□ -0.91
NT5C3A-212ENST00000497542 KIAA1468Q9P260 1216 aa9.34□□□□□ -0.91
NT5C3A-212ENST00000497542 EPAS1Q99814 870 aa9.3□□□□□ -0.92
NT5C3A-212ENST00000497542 GTPBP6O43824 516 aaPredicted RBP9.29□□□□□ -0.92
NT5C3A-212ENST00000497542 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
NT5C3A-212ENST00000497542 TSR3Q9UJK0 312 aaKnown RBP9.29□□□□□ -0.92
NT5C3A-212ENST00000497542 TRIM6-TRIM34B2RNG4 842 aa9.28□□□□□ -0.92
NT5C3A-212ENST00000497542 C6orf132Q5T0Z8 1188 aa9.28□□□□□ -0.92
NT5C3A-212ENST00000497542 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.28□□□□□ -0.92
NT5C3A-212ENST00000497542 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
NT5C3A-212ENST00000497542 LRCH3Q96II8 777 aa9.27□□□□□ -0.93
NT5C3A-212ENST00000497542 HPS5Q9UPZ3 1129 aa9.26□□□□□ -0.93
NT5C3A-212ENST00000497542 TRAF7Q6Q0C0 670 aa9.24□□□□□ -0.93
NT5C3A-212ENST00000497542 GFRA3O60609 400 aa9.23□□□□□ -0.93
NT5C3A-212ENST00000497542 LCE2BO14633 110 aa9.22□□□□□ -0.93
NT5C3A-212ENST00000497542 CAMK2BQ13554 666 aa9.2□□□□□ -0.94
NT5C3A-212ENST00000497542 NRG2O14511 850 aaPredicted RBP9.19□□□□□ -0.94
NT5C3A-212ENST00000497542 PACS2Q86VP3 889 aa9.19□□□□□ -0.94
NT5C3A-212ENST00000497542 PPP4CP60510 307 aa9.17□□□□□ -0.94
NT5C3A-212ENST00000497542 TJAP1Q5JTD0 557 aa9.17□□□□□ -0.94
NT5C3A-212ENST00000497542 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
NT5C3A-212ENST00000497542 DPYSL4O14531 572 aa9.16□□□□□ -0.94
NT5C3A-212ENST00000497542 CADPS2Q86UW7 1296 aa9.16□□□□□ -0.94
NT5C3A-212ENST00000497542 PRKD2Q9BZL6 878 aa9.16□□□□□ -0.94
NT5C3A-212ENST00000497542 V9GY48 417 aaPredicted RBP9.16□□□□□ -0.94
NT5C3A-212ENST00000497542 TSKSQ9UJT2 592 aa9.15□□□□□ -0.94
NT5C3A-212ENST00000497542 EN1Q05925 392 aaPredicted RBP9.14□□□□□ -0.95
NT5C3A-212ENST00000497542 DDX12PQ92771 950 aa9.13□□□□□ -0.95
NT5C3A-212ENST00000497542 IL21Q9HBE4 155 aa9.13□□□□□ -0.95
NT5C3A-212ENST00000497542 MTRQ99707 1265 aa9.11□□□□□ -0.95
NT5C3A-212ENST00000497542 MAP3K7O43318 606 aa9.1□□□□□ -0.95
NT5C3A-212ENST00000497542 NBR1Q14596 966 aa9.1□□□□□ -0.95
NT5C3A-212ENST00000497542 PPP1R18Q6NYC8 613 aa9.1□□□□□ -0.95
NT5C3A-212ENST00000497542 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
NT5C3A-212ENST00000497542 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
NT5C3A-212ENST00000497542 CERKQ8TCT0 537 aa9.08□□□□□ -0.96
NT5C3A-212ENST00000497542 CDCA7LQ96GN5 454 aa9.08□□□□□ -0.96
NT5C3A-212ENST00000497542 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
NT5C3A-212ENST00000497542 PRSS12P56730 875 aa9.07□□□□□ -0.96
NT5C3A-212ENST00000497542 PDIA6Q15084 440 aa9.07□□□□□ -0.96
NT5C3A-212ENST00000497542 NBPF26B4DH59 902 aa9.06□□□□□ -0.96
NT5C3A-212ENST00000497542 SMAPO00193 183 aa9.05□□□□□ -0.96
NT5C3A-212ENST00000497542 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
NT5C3A-212ENST00000497542 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
NT5C3A-212ENST00000497542 SPDYE16A6NNV3 312 aaPredicted RBP9.04□□□□□ -0.96
NT5C3A-212ENST00000497542 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
NT5C3A-212ENST00000497542 GGCXP38435 758 aa9.03□□□□□ -0.96
NT5C3A-212ENST00000497542 ZNF516Q92618 1163 aa9.03□□□□□ -0.96
NT5C3A-212ENST00000497542 TATDN2Q93075 761 aa9.03□□□□□ -0.96
NT5C3A-212ENST00000497542 FAM198AQ9UFP1 575 aa9.03□□□□□ -0.96
NT5C3A-212ENST00000497542 HDGFP51858 240 aaKnown RBP9.02□□□□□ -0.97
NT5C3A-212ENST00000497542 PNMA3Q9UL41 463 aa9.02□□□□□ -0.97
NT5C3A-212ENST00000497542 APLP1P51693 650 aa9□□□□□ -0.97
NT5C3A-212ENST00000497542 RBM27Q9P2N5 1060 aaKnown RBP9□□□□□ -0.97
NT5C3A-212ENST00000497542 C3orf80F5H4A9 247 aa8.99□□□□□ -0.97
NT5C3A-212ENST00000497542 RNF40O75150 1001 aa8.99□□□□□ -0.97
NT5C3A-212ENST00000497542 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
NT5C3A-212ENST00000497542 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
NT5C3A-212ENST00000497542 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
NT5C3A-212ENST00000497542 ZNF775Q96BV0 537 aaPredicted RBP8.97□□□□□ -0.97
NT5C3A-212ENST00000497542 NUDT18Q6ZVK8 323 aa8.96□□□□□ -0.98
NT5C3A-212ENST00000497542 PRIM1P49642 420 aaKnown RBP8.94□□□□□ -0.98
NT5C3A-212ENST00000497542 SLF2Q8IX21 1173 aa8.94□□□□□ -0.98
NT5C3A-212ENST00000497542 ARIH1Q9Y4X5 557 aaPredicted RBP8.93□□□□□ -0.98
NT5C3A-212ENST00000497542 COPS2P61201 443 aa8.92□□□□□ -0.98
NT5C3A-212ENST00000497542 PRR14Q9BWN1 585 aa8.92□□□□□ -0.98
NT5C3A-212ENST00000497542 GRXCR2A6NFK2 248 aa8.91□□□□□ -0.98
NT5C3A-212ENST00000497542 ZPR1O75312 459 aa8.91□□□□□ -0.98
NT5C3A-212ENST00000497542 SLC4A3P48751 1232 aa8.91□□□□□ -0.98
NT5C3A-212ENST00000497542 SWT1Q5T5J6 900 aaKnown RBP8.91□□□□□ -0.98
NT5C3A-212ENST00000497542 TRIM67Q6ZTA4 783 aa8.9□□□□□ -0.98
NT5C3A-212ENST00000497542 TTC13Q8NBP0 860 aa8.9□□□□□ -0.98
NT5C3A-212ENST00000497542 CDHR5Q9HBB8 845 aa8.9□□□□□ -0.98
NT5C3A-212ENST00000497542 DGAT1O75907 488 aa8.89□□□□□ -0.99
NT5C3A-212ENST00000497542 PKDCCQ504Y2 493 aa8.89□□□□□ -0.99
NT5C3A-212ENST00000497542 OSBPP22059 807 aa8.88□□□□□ -0.99
NT5C3A-212ENST00000497542 SLC19A1P41440 591 aa8.88□□□□□ -0.99
NT5C3A-212ENST00000497542 PRR20EP86478 221 aa8.88□□□□□ -0.99
NT5C3A-212ENST00000497542 PRR20CP86479 221 aa8.88□□□□□ -0.99
NT5C3A-212ENST00000497542 PRR20DP86480 221 aa8.88□□□□□ -0.99
NT5C3A-212ENST00000497542 PRR20BP86481 221 aa8.88□□□□□ -0.99
NT5C3A-212ENST00000497542 PRR20AP86496 221 aa8.88□□□□□ -0.99
NT5C3A-212ENST00000497542 E2F4Q16254 413 aa8.88□□□□□ -0.99
NT5C3A-212ENST00000497542 MYT1Q01538 1121 aa8.87□□□□□ -0.99
NT5C3A-212ENST00000497542 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
NT5C3A-212ENST00000497542 PCDHB3Q9Y5E6 796 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms