RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 DPY19L2Q6NUT2 758 aa9.54□□□□□ -0.88
UBE3C-208ENST00000497368 ILDR1Q86SU0 546 aaPredicted RBP9.54□□□□□ -0.88
UBE3C-208ENST00000497368 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
UBE3C-208ENST00000497368 PHF8Q9UPP1 1060 aa9.53□□□□□ -0.88
UBE3C-208ENST00000497368 GOLGA3Q08378 1498 aa9.53□□□□□ -0.88
UBE3C-208ENST00000497368 RAPGEF6Q8TEU7 1601 aa9.53□□□□□ -0.88
UBE3C-208ENST00000497368 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.89
UBE3C-208ENST00000497368 TTBK1Q5TCY1 1321 aaPredicted RBP9.52□□□□□ -0.89
UBE3C-208ENST00000497368 SOX12O15370 315 aa9.51□□□□□ -0.89
UBE3C-208ENST00000497368 HS6ST3Q8IZP7 471 aa9.51□□□□□ -0.89
UBE3C-208ENST00000497368 ABCA9Q8IUA7 1624 aa9.51□□□□□ -0.89
UBE3C-208ENST00000497368 FRMPD1Q5SYB0 1578 aa9.5□□□□□ -0.89
UBE3C-208ENST00000497368 LRRIQ1Q96JM4 1722 aa9.5□□□□□ -0.89
UBE3C-208ENST00000497368 MAMSTRQ6ZN01 415 aa9.49□□□□□ -0.89
UBE3C-208ENST00000497368 MS4A4AQ96JQ5 239 aa9.49□□□□□ -0.89
UBE3C-208ENST00000497368 SCUBE2Q9NQ36 999 aa9.49□□□□□ -0.89
UBE3C-208ENST00000497368 MAGI3Q5TCQ9 1506 aa9.49□□□□□ -0.89
UBE3C-208ENST00000497368 ATP10BO94823 1461 aa9.48□□□□□ -0.89
UBE3C-208ENST00000497368 NUP153P49790 1475 aaKnown RBP9.48□□□□□ -0.89
UBE3C-208ENST00000497368 MFRPQ9BY79 579 aa9.48□□□□□ -0.89
UBE3C-208ENST00000497368 KDM4FA0A1W2PPD8 638 aa9.46□□□□□ -0.9
UBE3C-208ENST00000497368 FBXO22Q8NEZ5 403 aa9.46□□□□□ -0.9
UBE3C-208ENST00000497368 EEA1Q15075 1411 aa9.46□□□□□ -0.9
UBE3C-208ENST00000497368 FHOD3Q2V2M9 1422 aa9.46□□□□□ -0.9
UBE3C-208ENST00000497368 ADGRL1O94910 1474 aa9.46□□□□□ -0.9
UBE3C-208ENST00000497368 SIGLEC1Q9BZZ2 1709 aa9.45□□□□□ -0.9
UBE3C-208ENST00000497368 NLRP6P59044 892 aa9.45□□□□□ -0.9
UBE3C-208ENST00000497368 L3MBTL3Q96JM7 780 aaPredicted RBP9.45□□□□□ -0.9
UBE3C-208ENST00000497368 TEX14Q8IWB6 1497 aa9.45□□□□□ -0.9
UBE3C-208ENST00000497368 EFCAB5A4FU69 1503 aa9.45□□□□□ -0.9
UBE3C-208ENST00000497368 TTC37Q6PGP7 1564 aa9.45□□□□□ -0.9
UBE3C-208ENST00000497368 RICTORQ6R327 1708 aa9.44□□□□□ -0.9
UBE3C-208ENST00000497368 BOLA1Q9Y3E2 137 aa9.43□□□□□ -0.9
UBE3C-208ENST00000497368 G3V3G9 751 aa9.41□□□□□ -0.9
UBE3C-208ENST00000497368 NKX1-1Q15270 411 aaPredicted RBP9.41□□□□□ -0.9
UBE3C-208ENST00000497368 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
UBE3C-208ENST00000497368 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
UBE3C-208ENST00000497368 CDK13Q14004 1512 aaKnown RBP9.41□□□□□ -0.9
UBE3C-208ENST00000497368 ARAP3Q8WWN8 1544 aa9.41□□□□□ -0.9
UBE3C-208ENST00000497368 CD109Q6YHK3 1445 aa9.4□□□□□ -0.9
UBE3C-208ENST00000497368 SLAIN1Q8ND83 568 aa9.4□□□□□ -0.9
UBE3C-208ENST00000497368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.4□□□□□ -0.91
UBE3C-208ENST00000497368 ARHGAP35Q9NRY4 1499 aa9.4□□□□□ -0.91
UBE3C-208ENST00000497368 ADAMTSL3P82987 1691 aa9.39□□□□□ -0.91
UBE3C-208ENST00000497368 KIF14Q15058 1648 aa9.38□□□□□ -0.91
UBE3C-208ENST00000497368 ARHGEF40Q8TER5 1519 aa9.38□□□□□ -0.91
UBE3C-208ENST00000497368 P3H3Q8IVL6 736 aa9.38□□□□□ -0.91
UBE3C-208ENST00000497368 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
UBE3C-208ENST00000497368 TMEM121BQ9BXQ6 578 aaPredicted RBP9.37□□□□□ -0.91
UBE3C-208ENST00000497368 PCF11O94913 1555 aaKnown RBP9.37□□□□□ -0.91
UBE3C-208ENST00000497368 HECW1Q76N89 1606 aa9.36□□□□□ -0.91
UBE3C-208ENST00000497368 ARID3CA6NKF2 412 aa9.36□□□□□ -0.91
UBE3C-208ENST00000497368 PPP1R37O75864 691 aa9.36□□□□□ -0.91
UBE3C-208ENST00000497368 HECW2Q9P2P5 1572 aa9.36□□□□□ -0.91
UBE3C-208ENST00000497368 BCORL1Q5H9F3 1711 aa9.36□□□□□ -0.91
UBE3C-208ENST00000497368 ZMYM4Q5VZL5 1548 aa9.35□□□□□ -0.91
UBE3C-208ENST00000497368 NEO1Q92859 1461 aa9.34□□□□□ -0.91
UBE3C-208ENST00000497368 MYO5CQ9NQX4 1742 aa9.34□□□□□ -0.91
UBE3C-208ENST00000497368 CFAP74Q9C0B2 1584 aa9.34□□□□□ -0.91
UBE3C-208ENST00000497368 MADDQ8WXG6 1647 aa9.34□□□□□ -0.91
UBE3C-208ENST00000497368 CDC42BPBQ9Y5S2 1711 aa9.32□□□□□ -0.92
UBE3C-208ENST00000497368 FAM9AQ8IZU1 332 aaPredicted RBP9.32□□□□□ -0.92
UBE3C-208ENST00000497368 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
UBE3C-208ENST00000497368 TMEM92Q6UXU6 159 aa9.3□□□□□ -0.92
UBE3C-208ENST00000497368 PREX2Q70Z35 1606 aa9.3□□□□□ -0.92
UBE3C-208ENST00000497368 RIMS1Q86UR5 1692 aaKnown RBP9.29□□□□□ -0.92
UBE3C-208ENST00000497368 CDC42BPAQ5VT25 1732 aa9.29□□□□□ -0.92
UBE3C-208ENST00000497368 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
UBE3C-208ENST00000497368 ITSN2Q9NZM3 1697 aa9.28□□□□□ -0.92
UBE3C-208ENST00000497368 KDM5CP41229 1560 aa9.28□□□□□ -0.92
UBE3C-208ENST00000497368 FANCAO15360 1455 aa9.28□□□□□ -0.92
UBE3C-208ENST00000497368 FAM163AQ96GL9 167 aaPredicted RBP9.27□□□□□ -0.93
UBE3C-208ENST00000497368 YEATS2Q9ULM3 1422 aa9.27□□□□□ -0.93
UBE3C-208ENST00000497368 POGZQ7Z3K3 1410 aa9.26□□□□□ -0.93
UBE3C-208ENST00000497368 AKNAQ7Z591 1439 aa9.26□□□□□ -0.93
UBE3C-208ENST00000497368 RANGAP1P46060 587 aaPredicted RBP9.26□□□□□ -0.93
UBE3C-208ENST00000497368 FER1L4A9Z1Z3 1794 aa9.26□□□□□ -0.93
UBE3C-208ENST00000497368 ABCA6Q8N139 1617 aa9.26□□□□□ -0.93
UBE3C-208ENST00000497368 ZFYVE16Q7Z3T8 1539 aa9.26□□□□□ -0.93
UBE3C-208ENST00000497368 BBXQ8WY36 941 aaPredicted RBP9.25□□□□□ -0.93
UBE3C-208ENST00000497368 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
UBE3C-208ENST00000497368 PTPRMP28827 1452 aa9.25□□□□□ -0.93
UBE3C-208ENST00000497368 ABCC1P33527 1531 aa9.25□□□□□ -0.93
UBE3C-208ENST00000497368 PHLDB1Q86UU1 1377 aa9.24□□□□□ -0.93
UBE3C-208ENST00000497368 DIP2CQ9Y2E4 1556 aa9.24□□□□□ -0.93
UBE3C-208ENST00000497368 FMN1Q68DA7 1419 aa9.24□□□□□ -0.93
UBE3C-208ENST00000497368 DENND4BO75064 1496 aaPredicted RBP9.24□□□□□ -0.93
UBE3C-208ENST00000497368 RAPGEF3O95398 923 aa9.24□□□□□ -0.93
UBE3C-208ENST00000497368 LCE2DQ5TA82 110 aaPredicted RBP9.24□□□□□ -0.93
UBE3C-208ENST00000497368 PLCH2O75038 1416 aa9.23□□□□□ -0.93
UBE3C-208ENST00000497368 TROQ12816 1431 aaPredicted RBP9.23□□□□□ -0.93
UBE3C-208ENST00000497368 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
UBE3C-208ENST00000497368 SAMD9LQ8IVG5 1584 aa9.22□□□□□ -0.93
UBE3C-208ENST00000497368 KIDINS220Q9ULH0 1771 aa9.22□□□□□ -0.93
UBE3C-208ENST00000497368 CASKIN1Q8WXD9 1431 aa9.22□□□□□ -0.93
UBE3C-208ENST00000497368 LMTK3Q96Q04 1460 aa9.21□□□□□ -0.93
UBE3C-208ENST00000497368 FYCO1Q9BQS8 1478 aa9.21□□□□□ -0.93
UBE3C-208ENST00000497368 REREQ9P2R6 1566 aa9.21□□□□□ -0.93
UBE3C-208ENST00000497368 C2orf72A6NCS6 295 aa9.2□□□□□ -0.94
UBE3C-208ENST00000497368 SNPHO15079 494 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms