RNA–Protein interactions for RNA: ENST00000497315.5

PSMD6-211, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 3

Gene PSMD6, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-211ENST00000497315 PTGDRQ13258 359 aa11.05□□□□□ -0.64
PSMD6-211ENST00000497315 VARS2Q5ST30 1063 aaKnown RBP11.05□□□□□ -0.64
PSMD6-211ENST00000497315 BARGINQ6ZT62 677 aa11.04□□□□□ -0.64
PSMD6-211ENST00000497315 FAM205CA6NFA0 338 aa11.03□□□□□ -0.64
PSMD6-211ENST00000497315 HIC1Q14526 733 aa11.03□□□□□ -0.64
PSMD6-211ENST00000497315 KRI1Q8N9T8 703 aaKnown RBP11.03□□□□□ -0.64
PSMD6-211ENST00000497315 BCL2L12Q9HB09 334 aa11.03□□□□□ -0.64
PSMD6-211ENST00000497315 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
PSMD6-211ENST00000497315 NPDC1Q9NQX5 325 aaPredicted RBP11.03□□□□□ -0.64
PSMD6-211ENST00000497315 GNPATO15228 680 aa11.02□□□□□ -0.65
PSMD6-211ENST00000497315 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
PSMD6-211ENST00000497315 FECHP22830 423 aa11.01□□□□□ -0.65
PSMD6-211ENST00000497315 PTPREP23469 700 aa11□□□□□ -0.65
PSMD6-211ENST00000497315 COL9A1P20849 921 aa10.98□□□□□ -0.65
PSMD6-211ENST00000497315 KCNK17Q96T54 332 aa10.98□□□□□ -0.65
PSMD6-211ENST00000497315 CERKQ8TCT0 537 aa10.97□□□□□ -0.65
PSMD6-211ENST00000497315 HS3ST6Q96QI5 342 aa10.96□□□□□ -0.65
PSMD6-211ENST00000497315 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
PSMD6-211ENST00000497315 MAP2K5Q13163 448 aa10.95□□□□□ -0.66
PSMD6-211ENST00000497315 KCNH8Q96L42 1107 aa10.95□□□□□ -0.66
PSMD6-211ENST00000497315 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
PSMD6-211ENST00000497315 PSEN2P49810 448 aa10.94□□□□□ -0.66
PSMD6-211ENST00000497315 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
PSMD6-211ENST00000497315 PADI6Q6TGC4 694 aa10.94□□□□□ -0.66
PSMD6-211ENST00000497315 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
PSMD6-211ENST00000497315 MINK1Q8N4C8 1332 aaPredicted RBP10.93□□□□□ -0.66
PSMD6-211ENST00000497315 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
PSMD6-211ENST00000497315 IRF6O14896 467 aa10.92□□□□□ -0.66
PSMD6-211ENST00000497315 PRSS12P56730 875 aa10.92□□□□□ -0.66
PSMD6-211ENST00000497315 POTEEQ6S8J3 1075 aa10.92□□□□□ -0.66
PSMD6-211ENST00000497315 ZNF687Q8N1G0 1237 aa10.92□□□□□ -0.66
PSMD6-211ENST00000497315 CCDC102AQ96A19 550 aa10.92□□□□□ -0.66
PSMD6-211ENST00000497315 AK7Q96M32 723 aa10.92□□□□□ -0.66
PSMD6-211ENST00000497315 ARHGAP33O14559 1287 aa10.91□□□□□ -0.66
PSMD6-211ENST00000497315 FAM161AQ3B820 660 aa10.9□□□□□ -0.66
PSMD6-211ENST00000497315 RBM27Q9P2N5 1060 aaKnown RBP10.89□□□□□ -0.67
PSMD6-211ENST00000497315 PROX2Q3B8N5 592 aa10.88□□□□□ -0.67
PSMD6-211ENST00000497315 TRIM66O15016 1216 aa10.87□□□□□ -0.67
PSMD6-211ENST00000497315 PBX2P40425 430 aa10.87□□□□□ -0.67
PSMD6-211ENST00000497315 DMRTA1Q5VZB9 504 aa10.87□□□□□ -0.67
PSMD6-211ENST00000497315 TTC13Q8NBP0 860 aa10.87□□□□□ -0.67
PSMD6-211ENST00000497315 FAM198AQ9UFP1 575 aa10.87□□□□□ -0.67
PSMD6-211ENST00000497315 TSKSQ9UJT2 592 aa10.87□□□□□ -0.67
PSMD6-211ENST00000497315 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
PSMD6-211ENST00000497315 ZBED2Q9BTP6 218 aa10.86□□□□□ -0.67
PSMD6-211ENST00000497315 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
PSMD6-211ENST00000497315 BRPF1P55201 1214 aaPredicted RBP10.82□□□□□ -0.68
PSMD6-211ENST00000497315 NEUROD2Q15784 382 aa10.82□□□□□ -0.68
PSMD6-211ENST00000497315 PACS2Q86VP3 889 aa10.82□□□□□ -0.68
PSMD6-211ENST00000497315 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
PSMD6-211ENST00000497315 OATP04181 439 aa10.81□□□□□ -0.68
PSMD6-211ENST00000497315 PDE4DQ08499 809 aa10.81□□□□□ -0.68
PSMD6-211ENST00000497315 METTL3Q86U44 580 aaKnown RBP10.81□□□□□ -0.68
PSMD6-211ENST00000497315 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
PSMD6-211ENST00000497315 NBPF26B4DH59 902 aa10.8□□□□□ -0.68
PSMD6-211ENST00000497315 NUDT18Q6ZVK8 323 aa10.8□□□□□ -0.68
PSMD6-211ENST00000497315 PHOX2BQ99453 314 aa10.8□□□□□ -0.68
PSMD6-211ENST00000497315 KIAA1468Q9P260 1216 aa10.8□□□□□ -0.68
PSMD6-211ENST00000497315 SMAPO00193 183 aa10.79□□□□□ -0.68
PSMD6-211ENST00000497315 RBM46Q8TBY0 533 aaKnown RBP10.79□□□□□ -0.68
PSMD6-211ENST00000497315 PXYLP1Q8TE99 480 aa10.79□□□□□ -0.68
PSMD6-211ENST00000497315 NLRP7Q8WX94 980 aa10.79□□□□□ -0.68
PSMD6-211ENST00000497315 TATDN2Q93075 761 aa10.79□□□□□ -0.68
PSMD6-211ENST00000497315 VPS9D1Q9Y2B5 631 aa10.79□□□□□ -0.68
PSMD6-211ENST00000497315 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
PSMD6-211ENST00000497315 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
PSMD6-211ENST00000497315 SLC4A5Q9BY07 1137 aa10.78□□□□□ -0.68
PSMD6-211ENST00000497315 GPBP1L1Q9HC44 474 aaPredicted RBP10.78□□□□□ -0.68
PSMD6-211ENST00000497315 TTLL12Q14166 644 aaPredicted RBP10.77□□□□□ -0.69
PSMD6-211ENST00000497315 AMHR2Q16671 573 aa10.77□□□□□ -0.69
PSMD6-211ENST00000497315 POTEGQ6S5H5 508 aa10.77□□□□□ -0.69
PSMD6-211ENST00000497315 EYA1Q99502 592 aa10.76□□□□□ -0.69
PSMD6-211ENST00000497315 RABGEF1Q9UJ41 708 aa10.76□□□□□ -0.69
PSMD6-211ENST00000497315 POTEMA6NI47 508 aa10.75□□□□□ -0.69
PSMD6-211ENST00000497315 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
PSMD6-211ENST00000497315 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
PSMD6-211ENST00000497315 SEPT9Q9UHD8 586 aaPredicted RBP10.75□□□□□ -0.69
PSMD6-211ENST00000497315 ADGRD1Q6QNK2 874 aa10.74□□□□□ -0.69
PSMD6-211ENST00000497315 PARP9Q8IXQ6 854 aa10.74□□□□□ -0.69
PSMD6-211ENST00000497315 RCCD1A6NED2 376 aa10.73□□□□□ -0.69
PSMD6-211ENST00000497315 TK2O00142 265 aa10.73□□□□□ -0.69
PSMD6-211ENST00000497315 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
PSMD6-211ENST00000497315 REPIN1Q9BWE0 567 aaKnown RBP10.72□□□□□ -0.69
PSMD6-211ENST00000497315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.71□□□□□ -0.69
PSMD6-211ENST00000497315 CLCN1P35523 988 aa10.71□□□□□ -0.69
PSMD6-211ENST00000497315 KRTAP3-3Q9BYR6 98 aa10.71□□□□□ -0.69
PSMD6-211ENST00000497315 KRTAP3-2Q9BYR7 98 aa10.71□□□□□ -0.69
PSMD6-211ENST00000497315 GPCPD1Q9NPB8 672 aa10.71□□□□□ -0.69
PSMD6-211ENST00000497315 DNAJB2P25686 324 aa10.7□□□□□ -0.7
PSMD6-211ENST00000497315 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
PSMD6-211ENST00000497315 NBPF3Q9H094 633 aa10.7□□□□□ -0.7
PSMD6-211ENST00000497315 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
PSMD6-211ENST00000497315 BHMG1C9JSJ3 638 aaPredicted RBP10.68□□□□□ -0.7
PSMD6-211ENST00000497315 FAM98CQ17RN3 349 aaKnown RBP10.67□□□□□ -0.7
PSMD6-211ENST00000497315 MRPL50Q8N5N7 158 aaKnown RBP10.67□□□□□ -0.7
PSMD6-211ENST00000497315 STAC3Q96MF2 364 aa10.67□□□□□ -0.7
PSMD6-211ENST00000497315 TMUB1Q9BVT8 246 aa10.67□□□□□ -0.7
PSMD6-211ENST00000497315 TMEM134Q9H6X4 195 aa10.67□□□□□ -0.7
PSMD6-211ENST00000497315 HRO43593 1189 aa10.66□□□□□ -0.7
PSMD6-211ENST00000497315 LAPTM4BQ86VI4 370 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms