RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 EPAS1Q99814 870 aa11.86□□□□□ -0.51
MSH5-219ENST00000497269 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
MSH5-219ENST00000497269 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
MSH5-219ENST00000497269 EN1Q05925 392 aaPredicted RBP11.85□□□□□ -0.51
MSH5-219ENST00000497269 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
MSH5-219ENST00000497269 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
MSH5-219ENST00000497269 ZDHHC16Q969W1 377 aa11.85□□□□□ -0.51
MSH5-219ENST00000497269 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
MSH5-219ENST00000497269 ZC3H15Q8WU90 426 aaKnown RBP11.83□□□□□ -0.52
MSH5-219ENST00000497269 LCE2DQ5TA82 110 aaPredicted RBP11.82□□□□□ -0.52
MSH5-219ENST00000497269 FBXW7Q969H0 707 aa11.82□□□□□ -0.52
MSH5-219ENST00000497269 EIF4G1Q04637 1599 aaKnown RBP11.82□□□□□ -0.52
MSH5-219ENST00000497269 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
MSH5-219ENST00000497269 C6orf132Q5T0Z8 1188 aa11.78□□□□□ -0.52
MSH5-219ENST00000497269 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
MSH5-219ENST00000497269 KCNK17Q96T54 332 aa11.76□□□□□ -0.53
MSH5-219ENST00000497269 AXIN2Q9Y2T1 843 aa11.75□□□□□ -0.53
MSH5-219ENST00000497269 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
MSH5-219ENST00000497269 GPR37O15354 613 aa11.74□□□□□ -0.53
MSH5-219ENST00000497269 FCHSD2O94868 740 aa11.74□□□□□ -0.53
MSH5-219ENST00000497269 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
MSH5-219ENST00000497269 SHROOM4Q9ULL8 1493 aa11.74□□□□□ -0.53
MSH5-219ENST00000497269 PTPREP23469 700 aa11.73□□□□□ -0.53
MSH5-219ENST00000497269 PTGDRQ13258 359 aa11.73□□□□□ -0.53
MSH5-219ENST00000497269 KRI1Q8N9T8 703 aaKnown RBP11.73□□□□□ -0.53
MSH5-219ENST00000497269 BCL2L12Q9HB09 334 aa11.73□□□□□ -0.53
MSH5-219ENST00000497269 COL9A1P20849 921 aa11.72□□□□□ -0.53
MSH5-219ENST00000497269 FECHP22830 423 aa11.72□□□□□ -0.53
MSH5-219ENST00000497269 PSEN2P49810 448 aa11.72□□□□□ -0.53
MSH5-219ENST00000497269 SLC24A3Q9HC58 644 aa11.71□□□□□ -0.53
MSH5-219ENST00000497269 NPDC1Q9NQX5 325 aaPredicted RBP11.71□□□□□ -0.53
MSH5-219ENST00000497269 ZMYND10O75800 440 aa11.7□□□□□ -0.54
MSH5-219ENST00000497269 GNPATO15228 680 aa11.69□□□□□ -0.54
MSH5-219ENST00000497269 KCNH8Q96L42 1107 aa11.69□□□□□ -0.54
MSH5-219ENST00000497269 HIC1Q14526 733 aa11.68□□□□□ -0.54
MSH5-219ENST00000497269 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
MSH5-219ENST00000497269 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
MSH5-219ENST00000497269 BARGINQ6ZT62 677 aa11.67□□□□□ -0.54
MSH5-219ENST00000497269 ZNF687Q8N1G0 1237 aa11.66□□□□□ -0.54
MSH5-219ENST00000497269 PPP1R3GB7ZBB8 358 aa11.65□□□□□ -0.54
MSH5-219ENST00000497269 FAM161AQ3B820 660 aa11.65□□□□□ -0.54
MSH5-219ENST00000497269 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
MSH5-219ENST00000497269 ARHGAP33O14559 1287 aa11.64□□□□□ -0.55
MSH5-219ENST00000497269 PROX2Q3B8N5 592 aa11.64□□□□□ -0.55
MSH5-219ENST00000497269 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
MSH5-219ENST00000497269 PRSS12P56730 875 aa11.62□□□□□ -0.55
MSH5-219ENST00000497269 CERKQ8TCT0 537 aa11.62□□□□□ -0.55
MSH5-219ENST00000497269 MAP2K5Q13163 448 aa11.6□□□□□ -0.55
MSH5-219ENST00000497269 POTEGQ6S5H5 508 aa11.6□□□□□ -0.55
MSH5-219ENST00000497269 CCDC102AQ96A19 550 aa11.6□□□□□ -0.55
MSH5-219ENST00000497269 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
MSH5-219ENST00000497269 TSKSQ9UJT2 592 aa11.59□□□□□ -0.55
MSH5-219ENST00000497269 POTEMA6NI47 508 aa11.58□□□□□ -0.56
MSH5-219ENST00000497269 SMAPO00193 183 aa11.57□□□□□ -0.56
MSH5-219ENST00000497269 PBX2P40425 430 aa11.57□□□□□ -0.56
MSH5-219ENST00000497269 ZBED2Q9BTP6 218 aa11.57□□□□□ -0.56
MSH5-219ENST00000497269 MINK1Q8N4C8 1332 aaPredicted RBP11.57□□□□□ -0.56
MSH5-219ENST00000497269 TRIM6-TRIM34B2RNG4 842 aa11.56□□□□□ -0.56
MSH5-219ENST00000497269 IRF6O14896 467 aa11.56□□□□□ -0.56
MSH5-219ENST00000497269 ANKRD13DQ6ZTN6 518 aa11.56□□□□□ -0.56
MSH5-219ENST00000497269 NLRP7Q8WX94 980 aa11.55□□□□□ -0.56
MSH5-219ENST00000497269 AK7Q96M32 723 aa11.55□□□□□ -0.56
MSH5-219ENST00000497269 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
MSH5-219ENST00000497269 KIAA1468Q9P260 1216 aa11.54□□□□□ -0.56
MSH5-219ENST00000497269 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
MSH5-219ENST00000497269 NUDT18Q6ZVK8 323 aa11.53□□□□□ -0.56
MSH5-219ENST00000497269 LSM11P83369 360 aaKnown RBP eCLIP11.52□□□□□ -0.57
MSH5-219ENST00000497269 PACS2Q86VP3 889 aa11.52□□□□□ -0.57
MSH5-219ENST00000497269 RBM27Q9P2N5 1060 aaKnown RBP11.52□□□□□ -0.57
MSH5-219ENST00000497269 SEPT9Q9UHD8 586 aaPredicted RBP11.52□□□□□ -0.57
MSH5-219ENST00000497269 ADGRG1Q9Y653 693 aa11.52□□□□□ -0.57
MSH5-219ENST00000497269 TRIM66O15016 1216 aa11.51□□□□□ -0.57
MSH5-219ENST00000497269 TTC13Q8NBP0 860 aa11.51□□□□□ -0.57
MSH5-219ENST00000497269 VPS9D1Q9Y2B5 631 aa11.51□□□□□ -0.57
MSH5-219ENST00000497269 NBPF26B4DH59 902 aa11.5□□□□□ -0.57
MSH5-219ENST00000497269 CDAN1Q8IWY9 1227 aa11.5□□□□□ -0.57
MSH5-219ENST00000497269 TATDN2Q93075 761 aa11.49□□□□□ -0.57
MSH5-219ENST00000497269 PHOX2BQ99453 314 aa11.49□□□□□ -0.57
MSH5-219ENST00000497269 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
MSH5-219ENST00000497269 ADGRD1Q6QNK2 874 aa11.48□□□□□ -0.57
MSH5-219ENST00000497269 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
MSH5-219ENST00000497269 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
MSH5-219ENST00000497269 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
MSH5-219ENST00000497269 TTLL12Q14166 644 aaPredicted RBP11.47□□□□□ -0.57
MSH5-219ENST00000497269 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
MSH5-219ENST00000497269 PDE4DQ08499 809 aa11.46□□□□□ -0.57
MSH5-219ENST00000497269 PXYLP1Q8TE99 480 aa11.46□□□□□ -0.57
MSH5-219ENST00000497269 RABGEF1Q9UJ41 708 aa11.46□□□□□ -0.57
MSH5-219ENST00000497269 OATP04181 439 aa11.45□□□□□ -0.58
MSH5-219ENST00000497269 MDM2Q00987 491 aaPredicted RBP11.45□□□□□ -0.58
MSH5-219ENST00000497269 GPBP1L1Q9HC44 474 aaPredicted RBP11.45□□□□□ -0.58
MSH5-219ENST00000497269 SLC4A5Q9BY07 1137 aa11.44□□□□□ -0.58
MSH5-219ENST00000497269 STAC3Q96MF2 364 aa11.43□□□□□ -0.58
MSH5-219ENST00000497269 EYA1Q99502 592 aa11.43□□□□□ -0.58
MSH5-219ENST00000497269 RCCD1A6NED2 376 aa11.42□□□□□ -0.58
MSH5-219ENST00000497269 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
MSH5-219ENST00000497269 BRPF1P55201 1214 aaPredicted RBP11.42□□□□□ -0.58
MSH5-219ENST00000497269 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
MSH5-219ENST00000497269 TK2O00142 265 aa11.41□□□□□ -0.58
MSH5-219ENST00000497269 MRPL50Q8N5N7 158 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms