RNA–Protein interactions for RNA: ENST00000497268.1

ZEB2-223, Transcript of zinc finger E-box binding homeobox 2, human

TSL 3

Gene ZEB2, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB2-223	ENST00000497268	PCDHGA10	Q9Y5H3	936 aa		12.54	□□□□□ -0.4
ZEB2-223	ENST00000497268	FBXW7	Q969H0	707 aa		12.53	□□□□□ -0.4
ZEB2-223	ENST00000497268	COL9A1	P20849	921 aa		12.52	□□□□□ -0.41
ZEB2-223	ENST00000497268	KCNC4	Q03721	635 aa		12.52	□□□□□ -0.41
ZEB2-223	ENST00000497268	TYW1B	Q6NUM6	668 aa		12.51	□□□□□ -0.41
ZEB2-223	ENST00000497268	ZFR	Q96KR1	1074 aa	Known RBP	12.5	□□□□□ -0.41
ZEB2-223	ENST00000497268	KIAA1468	Q9P260	1216 aa		12.5	□□□□□ -0.41
ZEB2-223	ENST00000497268	PHF14	O94880	888 aa		12.49	□□□□□ -0.41
ZEB2-223	ENST00000497268	ONECUT3	O60422	494 aa	Predicted RBP	12.48	□□□□□ -0.41
ZEB2-223	ENST00000497268	MFSD10	Q14728	455 aa		12.48	□□□□□ -0.41
ZEB2-223	ENST00000497268	LAPTM4A	Q15012	233 aa		12.47	□□□□□ -0.41
ZEB2-223	ENST00000497268	WBP1L	Q9NX94	342 aa		12.47	□□□□□ -0.41
ZEB2-223	ENST00000497268	EMILIN3	Q9NT22	766 aa		12.46	□□□□□ -0.41
ZEB2-223	ENST00000497268	GTPBP6	O43824	516 aa	Predicted RBP	12.42	□□□□□ -0.42
ZEB2-223	ENST00000497268	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.42	□□□□□ -0.42
ZEB2-223	ENST00000497268	EPAS1	Q99814	870 aa		12.41	□□□□□ -0.42
ZEB2-223	ENST00000497268	TSR3	Q9UJK0	312 aa	Known RBP	12.41	□□□□□ -0.42
ZEB2-223	ENST00000497268	FAM98C	Q17RN3	349 aa	Known RBP	12.4	□□□□□ -0.42
ZEB2-223	ENST00000497268	C6orf132	Q5T0Z8	1188 aa		12.4	□□□□□ -0.42
ZEB2-223	ENST00000497268	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.4	□□□□□ -0.42
ZEB2-223	ENST00000497268	LRCH3	Q96II8	777 aa		12.39	□□□□□ -0.43
ZEB2-223	ENST00000497268	TRIM6-TRIM34	B2RNG4	842 aa		12.38	□□□□□ -0.43
ZEB2-223	ENST00000497268	HPS5	Q9UPZ3	1129 aa		12.37	□□□□□ -0.43
ZEB2-223	ENST00000497268	GFRA3	O60609	400 aa		12.35	□□□□□ -0.43
ZEB2-223	ENST00000497268	TRAF7	Q6Q0C0	670 aa		12.34	□□□□□ -0.43
ZEB2-223	ENST00000497268	RBM33	Q96EV2	1170 aa	Known RBP	12.31	□□□□□ -0.44
ZEB2-223	ENST00000497268	PPP4C	P60510	307 aa		12.3	□□□□□ -0.44
ZEB2-223	ENST00000497268	PACS2	Q86VP3	889 aa		12.3	□□□□□ -0.44
ZEB2-223	ENST00000497268	DPYSL4	O14531	572 aa		12.26	□□□□□ -0.45
ZEB2-223	ENST00000497268	CAMK2B	Q13554	666 aa		12.25	□□□□□ -0.45
ZEB2-223	ENST00000497268	PRKD2	Q9BZL6	878 aa		12.25	□□□□□ -0.45
ZEB2-223	ENST00000497268	NRG2	O14511	850 aa	Predicted RBP	12.24	□□□□□ -0.45
ZEB2-223	ENST00000497268	DDX12P	Q92771	950 aa		12.24	□□□□□ -0.45
ZEB2-223	ENST00000497268	LCE2B	O14633	110 aa		12.23	□□□□□ -0.45
ZEB2-223	ENST00000497268	CADPS2	Q86UW7	1296 aa		12.23	□□□□□ -0.45
ZEB2-223	ENST00000497268	TJAP1	Q5JTD0	557 aa		12.21	□□□□□ -0.45
ZEB2-223	ENST00000497268	TSKS	Q9UJT2	592 aa		12.21	□□□□□ -0.45
ZEB2-223	ENST00000497268	MAP3K7	O43318	606 aa		12.2	□□□□□ -0.46
ZEB2-223	ENST00000497268		V9GY48	417 aa	Predicted RBP	12.2	□□□□□ -0.46
ZEB2-223	ENST00000497268	IL21	Q9HBE4	155 aa		12.19	□□□□□ -0.46
ZEB2-223	ENST00000497268	EN1	Q05925	392 aa	Predicted RBP	12.18	□□□□□ -0.46
ZEB2-223	ENST00000497268	NBR1	Q14596	966 aa		12.18	□□□□□ -0.46
ZEB2-223	ENST00000497268	PPP1R18	Q6NYC8	613 aa		12.17	□□□□□ -0.46
ZEB2-223	ENST00000497268	SAMD7	Q7Z3H4	446 aa		12.17	□□□□□ -0.46
ZEB2-223	ENST00000497268	MTR	Q99707	1265 aa		12.16	□□□□□ -0.46
ZEB2-223	ENST00000497268	DCAF8L2	P0C7V8	631 aa		12.15	□□□□□ -0.46
ZEB2-223	ENST00000497268	TSR1	Q2NL82	804 aa	Known RBP	12.15	□□□□□ -0.46
ZEB2-223	ENST00000497268	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.14	□□□□□ -0.47
ZEB2-223	ENST00000497268	HDGF	P51858	240 aa	Known RBP	12.13	□□□□□ -0.47
ZEB2-223	ENST00000497268	ZNF787	Q6DD87	383 aa		12.13	□□□□□ -0.47
ZEB2-223	ENST00000497268	CDCA7L	Q96GN5	454 aa		12.13	□□□□□ -0.47
ZEB2-223	ENST00000497268	SMAP	O00193	183 aa		12.12	□□□□□ -0.47
ZEB2-223	ENST00000497268	CERK	Q8TCT0	537 aa		12.12	□□□□□ -0.47
ZEB2-223	ENST00000497268	PRSS12	P56730	875 aa		12.11	□□□□□ -0.47
ZEB2-223	ENST00000497268	NBPF26	B4DH59	902 aa		12.1	□□□□□ -0.47
ZEB2-223	ENST00000497268	PDZRN3	Q9UPQ7	1066 aa		12.1	□□□□□ -0.47
ZEB2-223	ENST00000497268	PNMA3	Q9UL41	463 aa		12.09	□□□□□ -0.47
ZEB2-223	ENST00000497268	TATDN2	Q93075	761 aa		12.08	□□□□□ -0.48
ZEB2-223	ENST00000497268	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.07	□□□□□ -0.48
ZEB2-223	ENST00000497268	RNF40	O75150	1001 aa		12.07	□□□□□ -0.48
ZEB2-223	ENST00000497268	GGCX	P38435	758 aa		12.07	□□□□□ -0.48
ZEB2-223	ENST00000497268	PDIA6	Q15084	440 aa		12.07	□□□□□ -0.48
ZEB2-223	ENST00000497268	ZNF516	Q92618	1163 aa		12.07	□□□□□ -0.48
ZEB2-223	ENST00000497268	NECTIN2	Q92692	538 aa		12.06	□□□□□ -0.48
ZEB2-223	ENST00000497268	FAM198A	Q9UFP1	575 aa		12.04	□□□□□ -0.48
ZEB2-223	ENST00000497268	APLP1	P51693	650 aa		12.02	□□□□□ -0.49
ZEB2-223	ENST00000497268	NUDT18	Q6ZVK8	323 aa		12	□□□□□ -0.49
ZEB2-223	ENST00000497268	NKX2-3	Q8TAU0	364 aa		12	□□□□□ -0.49
ZEB2-223	ENST00000497268	TMUB1	Q9BVT8	246 aa		11.99	□□□□□ -0.49
ZEB2-223	ENST00000497268	C3orf80	F5H4A9	247 aa		11.98	□□□□□ -0.49
ZEB2-223	ENST00000497268	ZNF775	Q96BV0	537 aa	Predicted RBP	11.98	□□□□□ -0.49
ZEB2-223	ENST00000497268	GRXCR2	A6NFK2	248 aa		11.97	□□□□□ -0.49
ZEB2-223	ENST00000497268	SLC4A3	P48751	1232 aa		11.96	□□□□□ -0.49
ZEB2-223	ENST00000497268	COPS2	P61201	443 aa		11.96	□□□□□ -0.49
ZEB2-223	ENST00000497268	RBM27	Q9P2N5	1060 aa	Known RBP	11.96	□□□□□ -0.49
ZEB2-223	ENST00000497268	SLF2	Q8IX21	1173 aa		11.95	□□□□□ -0.5
ZEB2-223	ENST00000497268	PRIM1	P49642	420 aa	Known RBP	11.92	□□□□□ -0.5
ZEB2-223	ENST00000497268	ZPR1	O75312	459 aa		11.91	□□□□□ -0.5
ZEB2-223	ENST00000497268	SWT1	Q5T5J6	900 aa	Known RBP	11.91	□□□□□ -0.5
ZEB2-223	ENST00000497268	PRR14	Q9BWN1	585 aa		11.9	□□□□□ -0.5
ZEB2-223	ENST00000497268	E2F4	Q16254	413 aa		11.89	□□□□□ -0.51
ZEB2-223	ENST00000497268	PKDCC	Q504Y2	493 aa		11.89	□□□□□ -0.51
ZEB2-223	ENST00000497268	CDHR5	Q9HBB8	845 aa		11.89	□□□□□ -0.51
ZEB2-223	ENST00000497268	SLC19A1	P41440	591 aa		11.88	□□□□□ -0.51
ZEB2-223	ENST00000497268	OSBP	P22059	807 aa		11.86	□□□□□ -0.51
ZEB2-223	ENST00000497268	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.86	□□□□□ -0.51
ZEB2-223	ENST00000497268	DGAT1	O75907	488 aa		11.85	□□□□□ -0.51
ZEB2-223	ENST00000497268	PCDHB3	Q9Y5E6	796 aa		11.85	□□□□□ -0.51
ZEB2-223	ENST00000497268	RNF223	E7ERA6	249 aa		11.83	□□□□□ -0.52
ZEB2-223	ENST00000497268	TRIM67	Q6ZTA4	783 aa		11.83	□□□□□ -0.52
ZEB2-223	ENST00000497268	TTC13	Q8NBP0	860 aa		11.83	□□□□□ -0.52
ZEB2-223	ENST00000497268	WDR70	Q9NW82	654 aa		11.83	□□□□□ -0.52
ZEB2-223	ENST00000497268	MYT1	Q01538	1121 aa		11.82	□□□□□ -0.52
ZEB2-223	ENST00000497268	PADI6	Q6TGC4	694 aa		11.82	□□□□□ -0.52
ZEB2-223	ENST00000497268	BBX	Q8WY36	941 aa	Predicted RBP	11.82	□□□□□ -0.52
ZEB2-223	ENST00000497268	SPRYD7	Q5W111	196 aa		11.81	□□□□□ -0.52
ZEB2-223	ENST00000497268	ZNF598	Q86UK7	904 aa	Known RBP	11.81	□□□□□ -0.52
ZEB2-223	ENST00000497268	PRR20E	P86478	221 aa		11.8	□□□□□ -0.52
ZEB2-223	ENST00000497268	PRR20C	P86479	221 aa		11.8	□□□□□ -0.52
ZEB2-223	ENST00000497268	PRR20D	P86480	221 aa		11.8	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms